Scleropages formosus (Asian bonytongue): 108918085
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Entry
108918085 CDS
T04919
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
108918085 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
108918085 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
sfm04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
108918085 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF_3
hEGF
EGF
FXa_inhibition
Plasmod_Pvs28
EGF_TEN
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
108918085
NCBI-ProteinID:
XP_018580543
LinkDB
All DBs
Position
8:complement(7883537..7974178)
Genome browser
AA seq
1723 aa
AA seq
DB search
MDMAWLRWNIFLSIGLFVSPAFASTELSGFRTLYVLQPGASAGDALRMSAISSRAGSREK
PRAITAELGDAGGQVRTRRMGSHPNPSAPLRHESTSTHQQQQQVRRAGHTSSSGAHHSQM
TISGINVCGGQCCQGWSRAPGSQRCTKPNCQPQCQNGGMCLRPQLCICKPGSKGKACEQK
TLPPSNPPTAGHTPGRTPSHTNGHTTGHTNGHTNGAIPGQGVVPQRPIPQQASPLIHTQG
HVSGPHTSMAQMTLTVKQSPQLLRPQSATQLVQPPLSRTFHQTQHFVIKPKYYHPPVQSG
DRAIPLTGGHSNVNGGNHTGRIRVVFTPSICKMTCSGGKCQNSCEMGNTTTIISENGHAT
DTLTASNFRVVVCHLPCMNGGRCSNRDRCQCPPNFTGKFCQVPVQGSAQQQLSISHSQGT
QVHSTHTLPLTFGGGQNQVKFSPNIVNIHVKHPPEATVQVHQVSQLDGGDQQVKGSQSGH
YSYHQRETSQKSQQSQHTYSNQRTIIHHYPVTSNSMLGRCFQETTGMQCGKALPGLSKQE
DCCNSVGTSWGFHKCQKCPKKTSIPLTDLRHAMDCPQGYKRINNSYCQDVNECLLQGVCP
NGHCLNTPGSYMCMCKPGYFLDPTRTTCIPDTPAVLEEKGACFRFVGSGKQCLHPVSVQL
SRQLCCCSVGKAWGPHCDKCPSPGTAAFKDICPGGMGYTVSGTYRPKPINRNQPEEIHRP
KVVHQEPQLPPVPLPTVQRPIEALSVTERQIPAVPVVTAAPEQELIILGANNRSGVEPGQ
PQLSPGVSTIRMEPIYPEVVEKTSPPAPVAILPSSASQGIAPTQLAEVNECHVSPDICGP
GICYNTAEGYTCICHSGYQLDEERITCRDVNECQDPDVCGQDGVCINTAGSFTCRHCQSG
YRMSETGNCEDINECLDPGACPAGLCTNTWGSYVCDPCPEGFEVHNGKCFDVDECQDSSI
CANGDCSNLEGNFLCTCHDGYQLSPDGRMCTDIDECQDERVCASGHCQNTDGSFVCNCEA
GFKLSSARDQCDDVDECKETPEVCGSGGVCINILGSYRCVCSPGFHTGNNSHCEDVDECL
EDPELCGPHGICQNTQGSFSCVCAQGFIAHEDYHTCEDVDECSEGNRCRSGSCINTDGSF
HCRCDRGYRLQADNETCLDVDECEMFGQSICGAWRCENTIGSYRCIVECPPGHILGPDGI
CVDVNECALNETVCGPHGFCENTVGSFRCLCHQGFQETPDGQGCVDVNECALNETVCGPH
GFCENTVGSFRCLCDRGFQETPDGQGCVDVNECELLSGVCGEALCDNVEGSFLCLCPEKN
QEFNHMTAKCSPAPTASSVERKECYYNLNDENLCDNVLTSSVTIEECCCTLGAGWGDNCE
VHPCPVEGTDQFHQMCPAGKGSIPNGDSVFEVASANGYKDADECVLFGDEICKDGFCLNT
PMSYECYCKQGLYYDDIKLQCLDIDECMDKTTCLGGQCINTLGSYMCFCSPPMVLDPSGM
HCVTQPPLAEQDGFYQDICWQTVTDTMTCAHPLADRKTTYMECCCTYGEAWGMNCALCPW
KDREDFIAMCNVPEWGRRPYGRDALTAPGVHYHEADPEIQQSSFKPPVLPLYKEEENPYD
AFEGLRAEECGVLNGCENGRCVRVQEGYTCDCFDGYTLDMSRMACIDVNECSELNNRMVL
CKNGKCINTQGSYKCVCLPGFVRSERPNYCVPGRKEAGASDTE
NT seq
5172 nt
NT seq
+upstream
nt +downstream
nt
atggatatggcttggctgcggtggaacattttcctttccattggcctttttgtttctccg
gcgttcgcgtccacagagctcagtggcttcaggacactgtacgtgctgcagcctggcgcg
agcgccggagacgcgctgcgcatgagcgccatctcgtcccgcgccgggtcgcgggaaaag
cctcgcgccatcaccgcggagctcggcgacgcgggtggccaggtgcggacgcgcaggatg
gggagtcacccgaacccgagcgcaccgctccgccacgaaagcacgtccacgcaccagcag
cagcagcaggttcggcgcgcgggccatactagcagcagcggcgcgcatcacagccagatg
acaatctctgggattaacgtctgtggagggcagtgctgtcaaggatggagcagggctccc
ggatcccagaggtgcaccaaaccaaactgccagccacagtgccagaatggagggatgtgt
ctgcggccccagctctgtatctgcaagccaggctccaagggcaaagcctgtgagcagaag
actctacccccatccaatccacctacagcaggccacacccctggccgtacaccaagtcac
accaatggacacaccactggacacaccaatggacataccaacggagccatccctgggcag
ggcgttgtgccacagcgacccatcccccagcaggcatccccactgatccacacccagggc
cacgtctctggcccccacaccagcatggctcaaatgaccctgactgtgaaacagtcaccc
caactcctccgaccccagtctgcaacacaactagtccaaccacctctctccaggaccttc
catcagacccagcactttgtcatcaagcccaagtactaccacccacccgtccaatcaggg
gaccgtgctatccccttgactgggggccacagcaatgtcaatggaggcaaccacacggga
cgcatccgcgtggttttcacccccagcatctgcaaaatgacctgcagtgggggtaaatgc
cagaacagctgtgagatgggcaacaccactacgatcatcagcgagaacggtcacgccacc
gataccctcaccgcctccaacttccgagtggtggtctgccacctgccctgcatgaatggg
gggaggtgcagcaacagagaccgatgccagtgcccacctaacttcacgggcaagttctgc
caggtacctgtgcagggcagtgcacaacagcagctctctatcagccacagccagggtaca
caggtccactctacacacacactgccactcaccttcggaggaggtcaaaaccaagtgaag
ttttcccccaacatcgtgaacattcacgtgaagcatcctccggaggcaactgtgcaggtg
caccaggtctcacagctggacggtggcgatcagcaagtgaagggttctcagtcaggccac
tactcctaccaccagagagagaccagccagaagagccagcagagccagcacacgtactcc
aaccagcggaccatcatccatcactaccctgtgacctctaacagtatgcttggacgttgc
ttccaggaaaccactggaatgcagtgcggaaaggcccttccaggcctctccaagcaagaa
gattgctgcaattctgttggcacctcttggggattccacaagtgccaaaaatgtccgaag
aaaacttccattcctttgacagacttgagacatgcaatggactgtccccaggggtacaag
agaatcaacaactcctactgccaagatgtgaatgagtgtttactgcagggtgtatgcccc
aacggacactgtctgaacacccctggcagctacatgtgcatgtgcaagccgggctacttt
ctcgatcctacccggaccacgtgtatacctgacactcctgcggtccttgaagagaagggg
gcttgtttccgctttgtgggctcagggaagcaatgcttacacccggtctcggtgcagctg
agcaggcagctctgctgctgcagcgtgggcaaggcctgggggccgcactgcgacaaatgc
cctagcccaggaacagctgccttcaaagacatctgccctgggggaatgggctacactgtc
tctggaacctacaggcccaagcccatcaaccggaaccagccagaagaaatccacagacct
aaagttgtgcatcaggagccccagctacctccagtccccttgcccactgtccaacggccc
attgaggccctgagtgtcactgagaggcaaatcccagctgtcccagtagtcactgcagcc
ccggagcaggagctcattattcttggtgctaataataggtcaggggttgagcctggccag
ccacagctttcccctggcgtctcgaccatacggatggagcccatctatccagaggtggtg
gagaaaacatcgccccctgccccagtggccatcttgccctccagcgcgagccagggcatt
gccccaacccagttggcagaggtaaatgagtgccatgtgagccctgatatctgtggacca
ggcatctgctacaacacagcagagggttacacctgcatatgccacagtggctaccagctg
gatgaagagaggatcacatgtagagatgtgaacgagtgtcaggaccctgacgtctgtggc
caggatggtgtctgcatcaacacagcaggttctttcacctgccgccactgtcagagtggc
tacaggatgagtgagacaggcaactgcgaagatattaacgaatgcctggaccctggcgcc
tgtcctgctgggctgtgcaccaacacgtgggggtcttacgtgtgtgacccctgtcctgaa
ggctttgaggttcacaatggcaagtgctttgatgtcgatgagtgccaggacagctcaata
tgtgccaatggtgactgctccaacctggagggcaattttctctgcacctgccatgatgga
tatcaactcagccctgatggcagaatgtgcacagacattgacgagtgccaggatgagcgg
gtgtgtgctagcgggcactgccagaacacggatgggtcgttcgtatgtaactgcgaagcc
gggtttaagctttcatctgctcgtgaccagtgtgatgatgtggacgagtgcaaggagaca
ccggaggtctgtggcagtgggggagtatgcatcaacatcctgggctcctaccgatgcgtc
tgttcccctgggttccacacaggcaacaactcccactgcgaggatgtggatgagtgcctg
gaggaccctgagctgtgtggcccccatggcatctgccagaacacacaaggctccttctcc
tgtgtctgtgcccaaggcttcatagcccatgaagattaccatacctgtgaagatgtggat
gagtgctcagagggcaatcggtgcagaagcggctcctgcataaacaccgatggctccttc
cactgccggtgtgatcggggctaccgcctacaagcagacaatgagacttgcctggatgtg
gacgaatgtgagatgtttgggcagagtatctgtggagcgtggcgctgtgagaacacaata
ggctcctacagatgcattgtggaatgcccacctggacacattctggggccggatggcatc
tgtgtggatgtgaacgagtgcgcactcaacgaaacggtgtgcggccctcatggcttctgt
gagaacacggtgggttctttccgctgcctgtgtcatcagggcttccaggaaaccccagat
ggccagggctgtgtggatgtgaacgagtgcgcactcaacgaaacggtgtgcggccctcat
ggattctgtgagaacacggtgggttctttccgctgcctgtgtgatcggggcttccaggag
accccagatggccagggctgtgtggatgtaaatgagtgtgagctgctaagtggggtgtgc
ggggaggcactttgtgacaatgtggagggatcgtttctctgcttgtgtcctgagaaaaac
caggagttcaaccatatgacagcgaagtgcagcccagctcctacagcctcctcagtggaa
cggaaggagtgttactacaacctgaacgacgagaacctgtgcgacaacgtgctcaccagc
agcgtgaccatcgaggagtgctgctgcacgctgggggccggctggggggacaattgcgag
gttcacccctgccccgttgagggtacagatcagtttcaccagatgtgccctgctgggaaa
ggtagtataccaaatggagactcagtctttgaggtggcatctgctaatggatacaaagat
gccgatgaatgtgtcctgttcggcgatgagatatgcaaggatggcttctgcctgaacacg
cctatgtcatacgagtgctactgcaaacaaggcctgtactatgatgatatcaagctgcag
tgtctcgatatcgatgagtgcatggacaaaaccacctgtctggggggtcagtgcattaac
acgctggggtcttacatgtgcttctgctcccctccaatggtgctggaccccagtggcatg
cactgtgtgacccaacctcctcttgcagagcaagacggcttctaccaggacatatgttgg
cagactgtcacagacaccatgacctgcgcccacccccttgcagaccggaagaccacctac
atggagtgctgctgcacgtatggggaggcttggggcatgaactgtgccctatgcccgtgg
aaagacagagaggacttcattgccatgtgcaatgttcccgagtgggggcgacgaccgtat
ggcagagatgccctcacagcccctggagtccactaccatgaagctgatccggagatccag
cagagctccttcaaacccccagtcctgcctctttacaaggaagaagaaaacccctatgat
gcctttgaaggcctacgagcggaggagtgtggggtcctgaatggctgtgagaatggtcgc
tgtgtgcgggtgcaggagggctacacctgtgactgcttcgatgggtacactctggacatg
tctcgcatggcctgcatcgatgtgaacgagtgctccgagctcaacaaccgaatggtgctc
tgcaagaacgggaagtgcatcaacacacaagggtcatacaagtgcgtatgcctgccgggc
tttgtgcgctctgagcgccccaactactgcgtgcctggcagaaaggaggcaggtgccagt
gacacggagtga
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