Scleropages formosus (Asian bonytongue): 108918279
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Entry
108918279 CDS
T04919
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04020
Calcium signaling pathway
sfm04260
Cardiac muscle contraction
sfm04261
Adrenergic signaling in cardiomyocytes
sfm04270
Vascular smooth muscle contraction
sfm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108918279
04020 Calcium signaling pathway
108918279
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108918279
09153 Circulatory system
04260 Cardiac muscle contraction
108918279
04261 Adrenergic signaling in cardiomyocytes
108918279
04270 Vascular smooth muscle contraction
108918279
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108918279
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108918279
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
RNA_pol_Rpc4
PFF1_TM
DUF4834
Motif
Other DBs
NCBI-GeneID:
108918279
NCBI-ProteinID:
XP_029103791
LinkDB
All DBs
Position
22:complement(5644493..5670247)
Genome browser
AA seq
1996 aa
AA seq
DB search
MEMNGNAGANRSDTLNSSSSTSTQRKKREHAKKPVQSTTTVIRAPRALFCLRLGNPIRMA
AIAIVEWKPFDIFILLAIFANCVALGVAKPFPEDDSNASNHALERVEYVFMIIFTIETFM
KILAYGLVMHPSAYIRSGWNLLDFVIVVVGLFSVVLEGTSHKPGEAHHMAGKPGGLDVKA
LRAFRVLRPLRLVSGVPSLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMH
KTCFYPSTELVVDDDPVPCAFAGNGRQCANGTECRGGWEGPNGGITNFDNFFFAMLTVFQ
CITMEGWTDVLYWMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAVAR
GDLQRANEKQQMEEDMIGYMDWLEQAEDIDEDDEEAKKKRRRRRRVFLRQIGAMEQDSDS
DSEDFENLDLDDDGCCASCCARLMANSLCDELCKWNHSFRKKCRSAVKSVAFYWLVLLLV
FLNTAASASEHYNQPEWLTRVQQIANRVLLTLFTMEMLLKMYSLGLQVYFMAFFNRFDCF
VVCGGIVETILVEMDIMPPLGIAVLRCVRLLRIFKVTRHWNALSNLVASLINSMKAIASL
LLLLFLYLIIFALLGMQLFGGKFNFDETQTKRSTFDSFPAALLTCFQILTGEDWNSVMYD
GIMAYGGPNFPGMIVCIYFVILFVCGNYILLNVFLAIAVDNLATGEAESKKKEEKKEEEE
EEEEDETEKIENEEDEEQQEGEEQEETGKQSNIATFAPPIEKIVPIPEGSSFFCLSKHNG
FRKGCHKLIHHPLYTNLILVFIILSSISLAAEDPIRAHSFRNTVLGYADYAFTSIFTVEI
ILKMTVYGAFLHEGSFCRNWFNLLDLLVVSVSLISFFLHSSAISVVKILRVLRVLRPLRA
INRAKGLKNVVQCVFVAIRTIGNILIVTTLLLFMFACIGVQLFKGKFYACTDEAKHTPEE
CKGTFVVYKDGDVNHPMMRERNWYNNDFNFDNVPMGMMALFTVSTFEGWPALLYKAIDAN
GENKGPIYNYRVEISIFFIIYIIIIAFFMMNIFVGFVIITFREQGEAEYKNCELDKNQRQ
CVYYALKATPLKLYIPKNPTQLKFWNIINSTAFEYIMFVLILLNTVTLAVQHYEQSKFFS
SVMDILNMIFTCLFTVEMILKLLALRLRHYFMDAWNSFDALIVVGSVLDIVVTELSTGHS
TEGSEESSRVSITFFRLFRVMRLVKLLNKGEGIRTLLWTFVKSLQALPYVGLLIAMIFFI
YAVIGMQTFGKIAMQDNSSINRNNNFQTFPQAVLLLFRCATGEAWQEIMLAAMPGKLCDP
ESDYEPEEEYTCGSNLAIVYFISFFMLCAFLIINLFIAVIMDNFDYLTRDWSILGPHHLD
EFKRLWSEYDPEASGRIKHLELVTLLRRIQPPLGFGKLCPHRVACKRLVAMNMPLSGDGT
VSFNATLFALVRTALKIRTDGDPEVDNEELRIIIKKIWKRTKAKILDDVLPPREGSESEI
TVGKFYASFLIQDYFRKYRKRKKNRKKKKDKSSALQAGLRTLQDLGPEMRLAMSCDLEGE
EEEMEGYGEEMGEDEEFYRSDSVYEQNDEPPPDELYPESPAMASTPLPPMEEELEEVIVN
EEMVDIPVEEPEEQELVEDPVPPSPPVCHEPLVQNKVVEEQPKPTITRREATNGYVPVTR
WEGATEPAEENCSGEQGYYSREEDTESTASRDRAWYPEAPPVYPGHREHIYDTQPPSHRS
YSPQYSSGHVEAPRTGRRRLLPPTPTGRRPTFNIQPLRRKNNNEDVTIPGTYRQNSPPCR
KRTQMYSGQDPYGSSVSSMGSSSSWANAAPRRGRLLYAPLILVQDEGQKTTSVSMWGDEG
TGSASLPASARPGWYTDTPENQPNSRAYASLRVPSQINSQYLDKKGSADSLVESVLISEG
LGLYAKDPKFVDFAKREIASACNMTIDEMERAANELLSRGSGGRMLSPADMAFLYSDEEP
MRSRMEEDLADEMNCV
NT seq
5991 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaacgggaatgcgggggcgaaccggtcagacaccctcaactcttccagctcc
acatccacgcaaaggaagaaacgagaacacgccaagaagccggtgcagtccacgacaacg
gtgatccgcgccccgcgcgctctcttctgcctccgcctcggcaaccccatccgcatggcc
gccatcgccatcgtggagtggaagccgtttgacattttcatcctgctggccattttcgcc
aactgtgtggctcttggtgtggccaaacctttcccagaggatgactctaatgcctcaaac
catgccctggaacgagtggaatatgtgtttatgatcatattcaccattgaaacgttcatg
aaaatcttggcctatgggctggtgatgcatcccagtgcctacatacgcagtggctggaac
ttgctggacttcgtcattgtcgttgttgggctgttcagtgtggtgctggagggcacatcc
cacaagcctggtgaagcccaccacatggcagggaagcccggaggactggatgtgaaggcg
ctgcgggctttcagggtgctgagacccctgaggctggtgtcaggtgtccccagtcttcag
attgtgttgaactccatcatgaaagccatggttccactgctccacatttccctgctggtt
ttatttgtcattatcatttatgccatcattggtctggagctcttcattggcagaatgcac
aagacctgtttttaccctagtaccgagctggtagtggacgacgatccagtaccttgtgca
tttgcgggaaatgggcgtcagtgtgcaaatgggacggagtgcaggggtggatgggaaggc
cccaatggtggcatcaccaactttgataatttcttcttcgccatgctgactgtattccag
tgtatcactatggagggctggactgacgtgctctactggatgaacgatgccattggtttt
gagctaccctgggtttacttcgtcagcctggttatctttggctccttctttgtcctaaac
cttgtgctgggtgtactgagcggagagttctctaaggagagggagaaggcggtggcacgt
ggagacctacagagggccaatgaaaagcagcagatggaagaagacatgataggatacatg
gactggctggaacaggcagaagacatagatgaggatgacgaagaagccaaaaaaaagcga
agaagaaggagacgagtctttctgcgacagatcggcgccatggagcaagacagtgactcc
gactcagaggacttcgagaacctcgaccttgatgatgatggctgctgtgcttcatgctgc
gcccgcctcatggccaatagtctctgtgatgaactctgcaaatggaaccactcgtttcgc
aagaagtgtcgatctgctgtcaagtcggttgctttctactggttggtgctgctactcgtc
tttctcaacactgctgccagtgcatctgagcactataatcagcctgagtggctcacaagg
gttcagcaaattgctaacagggttctactgacactgttcacaatggagatgctcctgaag
atgtacagcctgggactacaggtgtatttcatggccttcttcaaccgcttcgactgcttt
gtggtgtgcgggggcatcgtggagacaatcctggtagaaatggatatcatgcctccgctg
ggcattgccgttctgcgctgtgtccggctgctcaggatcttcaaggtcacacgccactgg
aatgccttgtctaacctggtggcttccttgatcaactccatgaaggccatcgcatccctg
ctgttgctgcttttcctatatctcatcatcttcgccctgttgggcatgcagctctttggt
ggcaagttcaactttgatgagacgcagaccaagcggagcacctttgactccttcccagca
gccttgcttacctgtttccagatcctgacaggtgaggactggaattctgtgatgtatgat
ggaatcatggcatacggaggtccgaacttccccggcatgattgtctgcatatactttgtg
atcctctttgtctgcggaaactatatcctactaaacgtcttcttggctattgctgtggac
aacttggccactggtgaagctgagagcaaaaagaaagaagagaagaaagaggaggaggaa
gaagaagaagaagatgagacagaaaaaatcgagaacgaggaagatgaggagcaacaggag
ggtgaggaacaagaagaaacagggaagcagtcaaacatagctacctttgcacctcccatt
gaaaaaatagtccctatccctgaggggtcctcgttcttctgcctcagcaagcacaatggg
ttccggaaaggttgccacaagctgatccaccatcccctctacaccaacctcatcttggtc
ttcatcattctcagcagcatttctctggctgctgaggatccgatcagagcgcactccttc
aggaacactgtcctgggttatgctgactatgctttcacttcaatcttcaccgtggaaatt
atacttaagatgactgtgtatggcgcatttctgcatgaaggctccttctgcaggaattgg
ttcaacctccttgacttgctggttgtgagcgtctctctgatctccttcttcctgcactca
agtgccatctccgttgtgaagatcctccgagtgctccgagtgctcaggcctcttcgagcc
attaacagagccaagggacttaagaatgttgtccagtgtgtgtttgtggccatcaggacc
attgggaacatccttatcgtcaccacactgctgctcttcatgttcgcctgtattggagtg
cagctcttcaagggtaaattctacgcttgcactgatgaagcaaagcacaccccggaggag
tgcaagggtacttttgtcgtgtacaaggacggtgatgtgaaccatcccatgatgagagag
agaaactggtacaacaatgatttcaactttgacaacgtgccaatgggcatgatggctctc
ttcactgtgtctacctttgaaggctggcctgctcttctatacaaagctatcgatgctaat
ggtgagaataaaggccccatctacaactaccgtgtggagatatccatcttcttcatcatc
tacatcatcatcattgctttttttatgatgaacatctttgttggttttgtcatcatcacc
ttccgtgagcagggtgaggcagagtataagaactgtgagctggacaaaaaccagaggcag
tgtgtatattatgcgttgaaggccaccccactgaaactctatattcccaagaacccaacg
cagctgaagttctggaacatcatcaactccacggcgtttgaatatatcatgtttgtcctg
atcctgctcaacacagtcactttagctgtgcagcattatgaacagtcaaagttcttcagc
tctgtcatggacattctcaacatgatcttcacatgtctgttcactgtggagatgatcctc
aaactcctggccctgcgactgaggcactacttcatggatgcctggaattccttcgatgct
cttattgtggtgggcagtgttctggacatcgtggtcacagaacttagtactggacactcc
acagagggttctgaggaaagctctagagtctccatcactttctttcgcctcttccgagtg
atgcgactagtcaagctgctcaacaaaggggaaggcattcgtaccctcctttggaccttt
gtcaagtcactccaggctctaccgtatgtaggcctcctcattgccatgatcttcttcatc
tacgccgtaatcggaatgcagacgtttgggaagatcgccatgcaggacaacagcagcatc
aacagaaacaacaacttccagaccttcccccaggctgtcctgctgctcttcaggtgtgcc
acaggtgaggcttggcaggagatcatgctggccgccatgccggggaaactgtgtgaccca
gagtccgactacgagcccgaagaggagtacacttgtggaagcaaccttgcaatagtctac
ttcatcagcttcttcatgctctgtgcttttctgatcatcaacctctttattgctgtcatc
atggacaactttgactatctcactcgcgactggtccattctcggtccccatcatttggac
gagttcaaaagactgtggtctgagtatgatcccgaggccagtggtcggataaaacacctg
gaattggtgactttgctgcgtaggatccagcctcctctgggcttcggcaagctgtgccct
catcgtgtagcctgcaagagactggtggccatgaacatgccactgagcggtgatggcaca
gtgagcttcaacgccactctgttcgccctggtcaggacagctttgaagattcgcacagat
ggtgacccagaagtagataatgaggagctaaggatcatcattaaaaagatatggaagcgc
acgaaggccaaaattctagatgacgtgcttccaccgagagaggggagtgagagtgagatt
acagtagggaaattctacgccagtttcctgattcaggattacttcaggaagtaccgcaaa
aggaagaagaaccggaagaagaagaaggataagtcctctgctctgcaggctggactgcga
accctacaagatctgggaccagagatgcggttggctatgtcatgcgacctggagggggaa
gaggaggaaatggaggggtatggagaagagatgggagaagatgaggaattctacaggagt
gacagtgtatatgagcagaacgatgaacctcctccagatgagctttaccccgagtctcct
gccatggccagcacccctttgccacccatggaagaagaactagaagaggtcatagtcaat
gaggaaatggtggacatacctgtggaagagccagaggagcaagagcttgtggaggatcct
gtgccaccttctccaccagtttgccatgaacccctggtccagaacaaggttgtggaggag
cagcccaagcccacgatcaccaggagagaagccaccaatgggtacgtccctgtgacccgg
tgggaaggcgccacggaacccgcagaggagaactgctcaggggagcagggatactacagc
agggaggaggacacggagagcactgcctcgcgagacagggcttggtaccctgaagccccc
ccggtttatcctggacatcgagaacacatctatgacacccaacccccaagccacagatct
tatagtccccagtacagcagcggtcatgtcgaggctccacggaccggtcggcgacgtctg
ctccctccaacgccgaccgggcgccggcctacatttaacattcagcctctgaggagaaag
aacaacaacgaggacgtcaccattcctggcacctaccgccaaaactctccgccctgccga
aaacgcacacagatgtacagcggccaagatccatacggaagcagcgtttcctccatgggt
tcttcctcatcatgggccaacgcggcacctcggcgtggccgcctgctctacgcccctctc
atcctcgtgcaggatgaagggcagaagaccaccagcgtgagcatgtggggggacgaaggc
acaggtagtgccagccttcccgcctccgcccggcctggttggtacacggacactccggaa
aaccagcccaacagcagggcttatgctagcctcagggttccctcccagatcaactcccag
tacctggacaagaagggcagtgcggacagccttgtggagtcggtcctgatctcagaaggg
ctgggactctatgcgaaggatcccaagtttgtagactttgcgaagcgcgagatcgccagt
gcttgcaacatgacaatcgatgagatggagagagcagccaatgaactgttgagccgaggg
agcggtggtcggatgctgagccctgccgacatggccttcctgtacagcgacgaggagccc
atgaggagccgaatggaggaggacctcgctgatgagatgaactgtgtctga
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