Scleropages formosus (Asian bonytongue): 108919645
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Entry
108919645 CDS
T04919
Symbol
traf3
Name
(RefSeq) TNF receptor-associated factor 3 isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04620
Toll-like receptor signaling pathway
sfm04621
NOD-like receptor signaling pathway
sfm04622
RIG-I-like receptor signaling pathway
sfm05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
108919645 (traf3)
04621 NOD-like receptor signaling pathway
108919645 (traf3)
04622 RIG-I-like receptor signaling pathway
108919645 (traf3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
108919645 (traf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
Sina_ZnF
zf-C3HC4_2
RING_XB3-XBAT31
DUF1664
MscS_porin
OVT1
NPV_P10
DUF7310
GAS
BLOC1_2
Crescentin
zf-RING_UBOX
MAD
Laminin_II
ATG16
zf-TRAF_2
Exonuc_VII_L
Snapin_Pallidin
DNA_topoisoIV
Mis12
Occludin_ELL
PUMA_CC
Baculo_PEP_C
V_ATPase_I
Fzo_mitofusin
Mod_r
Fez1
Sec3_CC
OmpH
DUF745
Motif
Other DBs
NCBI-GeneID:
108919645
NCBI-ProteinID:
XP_018583336
UniProt:
A0A8C9VHY2
LinkDB
All DBs
Position
15:15423007..15444586
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AA seq
568 aa
AA seq
DB search
MSAGRNVDGRELQIPLHQRPPSLAQRSWTEPGFLPLQGGFRDRFVLPPEPKYCCEACHFV
LCNPKQTECGHRFCETCILDLLSKRDPVCPVDMEPLFEDKIFRDVCCNREIMALKVYCRN
EKNGCKEQMSLHQVMDHLNVCPYFEVPCPLGKCKEKMMRKDMPDHLAWKCKYRETTCEFC
KHKMALTEIQKHKETVCPAFPVACPNNCTYSSILRSELSSHQHDCPKAQVSCAFTRYGCT
FKGLNQDMKDHDSSFVSEHLRMMATRNAALEAKVEDVKGELQERYKVLPGLNSRLSEMES
CLEEMREKSRQVEQKLSSMQKVLSSHTEKMLEIELELRSLRSMRDEVESLRNSVENIRSR
VTALELGQVGTSSGTQTLKTLEQQMSRHDDMLSVHEIRLADMDLRFQVLETASYNGTLIW
KIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVVMRG
EYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPAGEMNIASGCPLFVAQ
TVLENGTYIKEDTIFIKVIVDTSDLPDP
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaggacggaatgtggacgggcgggagttacagatcccccttcatcagcgtcct
ccttccctggcgcagcgatcctggactgagcctggattcctgccgcttcaggggggcttc
agagaccgctttgttctcccaccggagcccaaatactgctgcgaggcatgccactttgtg
ctgtgcaacccaaagcagaccgagtgtggacaccgtttctgtgagacctgtatcttggac
ctgctcagcaaacgggatcctgtttgtcctgtagacatggaacctttgtttgaagacaag
atatttcgagatgtatgctgtaacagagagattatggcactgaaggtctactgtaggaat
gagaagaatggctgcaaagagcagatgagtctacatcaggtcatggatcacttgaatgtc
tgtccatattttgaagtcccctgtcctctgggaaagtgcaaagaaaaaatgatgcgcaaa
gacatgcctgaccacttagcctggaagtgtaaatacagagagactacgtgtgaattctgt
aaacacaagatggcgctaacggagatacagaaacacaaagaaactgtctgtcctgcattt
ccagtggcctgccctaataattgtacttattcttctattttaagaagtgagctctccagt
catcagcatgactgtccaaaggcacaggtcagttgcgccttcacacgctatggatgcaca
ttcaagggtctcaaccaggatatgaaagaccatgattccagctttgtctcagaacatctg
cgaatgatggcaaccagaaatgctgcacttgaagcaaaagttgaagatgtaaaaggggag
ctgcaagaacgatacaaggtcctaccaggtttgaactcgcgcctatcagaaatggaatct
tgccttgaagaaatgagggagaagagcagacaggtggagcagaagctatccagtatgcaa
aaggtgctgagctcacatactgagaagatgctggagatagagctggagctgagatcacta
cggtcaatgcgggatgaggtggagtctttacggaatagtgtggaaaatatccgatcccgt
gtgacagctttggagttgggacaagtggggaccagctctggaacacaaaccttaaaaact
ttggagcagcaaatgtcccggcatgacgacatgctcagcgtacatgagattcgcctggct
gacatggacttgcgcttccaggtactggagacagccagttacaatgggacacttatatgg
aagattagggactataagcggcggaagcaggaggcggtggcatccaagactctttctctt
tatagccaacctttttacactggttattttggctacaagatgtgtgccagggtctatctg
aatggcgatggcatgggtaagggtacgcacttgtcactcttctttgtcgtgatgcgtgga
gagtatgacgcgctgctgccctggcccttcaaacagaaagtgacactcatgctaatggac
cagggaccagcacgtaagcacctgggtgacgcatttaaacctgaccctaatagtagcagc
tttcggcgtccagcaggtgaaatgaacattgcatcgggatgtccactttttgtggcccag
acagttttggaaaatggcacgtacatcaaggaggacactatcttcattaaggtcatagtg
gacacttcagaccttcctgacccctga
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