Scleropages formosus (Asian bonytongue): 108920957
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Entry
108920957 CDS
T04919
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108920957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108920957
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
108920957
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108920957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
DUF6643
Motif
Other DBs
NCBI-GeneID:
108920957
NCBI-ProteinID:
XP_018585620
LinkDB
All DBs
Position
21:17465583..17471260
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AA seq
432 aa
AA seq
DB search
MEENFYSALTVPTDYLQHWYQSNQHVQALQATQYQQMPSMAHFMEGSLEDRVMTELAVHQ
DSPAHREPSFGSELPVYQESAFSCEPAAHNQPSFSCEPPLHQESPVYQEPTVAVSVQTPT
KGKRGRPPNKPKDSNQEEVEEGLKKVKRKVDRFNGMSVDEVMAKTLPDVLAYNLDILIIG
INPGLMSAYIGHHYPNPGNHFWKCLFMAGLTDEQLNYMHDQILPEKYGIGFTNMVERTTP
GSKDLSSKEFREGGRLLVEKLKKYRPLIAVFNGKCIYEIFSKEVFGIKTKTLEFGLQPHK
VPGTDTVCYLMPSSSARCAQFPRAQDKVHFYIKLKELRNQLRGVVRNPDVLETKYTFDLN
LAKEDAKRMAIKEEQYDPGYEDFSGAYGELGPGAGQSKSRACNGIAPSAVMGQNMEGQWN
MQPNQIRAQQHQ
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatttttactcagctctgacggtccctacggactatcttcaacactggtac
cagtccaaccagcatgtgcaggcactccaggccactcagtaccagcagatgcccagcatg
gctcattttatggagggctccttggaggacagggtgatgacggaattggctgtccaccag
gactcccccgcccatcgagaaccctctttcggctctgagctcccggtctaccaggagtcc
gctttcagctgcgagcccgctgcccacaatcaaccttctttcagctgcgagcctcctctg
caccaagagtccccagtctaccaggagcctacagttgccgtctcagtgcaaactcccacg
aaaggaaagagaggaaggcctcccaataagcccaaagacagcaaccaagaagaggttgag
gagggtttaaaaaaggtcaagagaaaagtggaccgcttcaatggcatgtcagtggatgaa
gtcatggccaaaacccttcctgatgttcttgcctataacctggacattttgattattgga
attaaccccggactgatgtcagcctatataggacatcattacccaaatccaggaaaccat
ttttggaagtgcctcttcatggcaggattaacagatgaacagctcaattacatgcatgac
cagattctgcctgagaaatacggtataggattcacaaacatggtggaaaggaccacacca
ggaagtaaagatctgtcaagcaaggaatttcgagaaggaggaaggcttttggtagaaaag
ctgaagaaatacagaccattaatagctgtattcaatggaaaatgtatttatgagatattc
agcaaagaggtctttggaattaagacaaagacccttgagtttggattacagcctcacaag
gtgccagggacagacactgtgtgctacctgatgccctcctcgagtgctcgctgtgcccag
ttcccacgtgcccaggataaagtgcacttctacatcaagctgaaggagctacggaaccag
ctaagaggcgtggttcggaacccagatgttctggagacaaagtacacatttgacctcaac
ttagccaaagaggatgcaaagagaatggcaatcaaggaggaacagtatgacccgggttac
gaggatttctctggagcgtatggagaattaggacctggagctgggcaaagcaaaagccgt
gcttgtaatggaattgcaccctcagcagttatgggccaaaatatggagggtcagtggaat
atgcagccaaatcagatacgagctcaacaacatcagtag
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