Scleropages formosus (Asian bonytongue): 108921141
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Entry
108921141 CDS
T04919
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04010
MAPK signaling pathway
sfm04260
Cardiac muscle contraction
sfm04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108921141 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108921141 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
108921141 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108921141 (cacna2d1)
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108921141 (cacna2d1)
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Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
RS_preATP-grasp-like
MACPF_D2
Motif
Other DBs
NCBI-GeneID:
108921141
NCBI-ProteinID:
XP_029107611
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Position
5:complement(20501814..20623808)
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AA seq
1088 aa
AA seq
DB search
MDARRIPVAVLALVCALSALSAAQFPTQLLIKEWVERMQQDLVKLAETASGVNNLAKIFS
EHRKQYIVEPNNARQLVASAARNIEMLLHKRSMALKELATAAENLQKMHQWKNDFGDDQI
VYYNAKDNLDSNETEDRKDRIRPEFKEDPTFKRLISYNHTAVHIPTDIYEGSTIVLNELN
WTEQLEEVFKKNREEDPTLLWQVFGSATGLARYFPASPWIDSRKTSKIDLYDVRRRPWYI
QGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVAYFNAEANSITCFD
HLVQANVRNKKILKDAVQNITAKGITSYKLGFEYAFKQFLNPNVTSANCNKIIMLFTDGG
EERAQEIFEKYNQDKKVRVFTFSVGQHNYDKGPIQWMACTNKGYYYEIPSIGAIRINTQE
YLDVLGRPMVLADEKAKQVQWTNVYLDALELGLVITGTLPVFNKTETKVTKDRTQKKVQN
QLILGVMAIDVSLEDIKRLTPRFTLGPNGYYFAIDPNGYVLLHPNLQPKIAKFQEPVTLD
FLDAELENEIKVEIRTNMISGKTGEKWLETLVKSQDERYIDHCSRTYTWSPVNSTDYSLA
LVLPEYSMHYIHATIGDTITQAKSFLEEKVFESMQVENFEDNGYTFIAPREYCKDLKILD
NNTEFLMDFNEFIDKQTPNGPSCNVSLVNRLLLDAGLTTKLVQLWKMQDPQGVLARFVAT
DGGITRVYPKSAGETWTENPETYESSFYKRSLDNDIYIFTAPFYNESGAAAIEFGILISR
SVDLNIDGVKLKPAVVGIKLSVTDWMANFTSITVKENCKDEICGCLRNDEHIDCVILDDG
GFLLMSNQDDYISQIGRFFGEVDPILMKTLVNTSLYSFHKTYDYQSVCKRERETKAAAGL
RSVYVPTIADILQVGWWATAAAWSILQQLLVSLTFPSFLEAADTEDDFSEFHSKESCITE
QTQYYFEGSERSYAGVLDCGNCSRMYHAEKLQSTNLVFLIMDSKKTCPCEQNQKPLIQAE
QQSTGPDPCKLAENPRYRKGPEVCFDNDENEDYSDCGGCSGLTPPLWAMVVIQLLLLWLL
SSSTDYAS
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgcgcaggatacctgtggctgtgctcgcgctcgtgtgcgcgctgagcgcgctc
tccgcggcgcagttccccacgcagctgctaatcaaggaatgggtggaacgcatgcagcag
gatcttgtcaagttggctgagacggcaagtggggttaacaaccttgcgaagattttttcc
gagcacaggaagcagtacattgtggaaccaaataacgcacggcaactcgtagccagtgct
gccaggaacattgagatgctgctgcacaagagatcaatggccctgaaggaactggcgaca
gcggcggagaatctgcagaagatgcatcagtggaagaacgactttggggatgatcaaatt
gtttattacaacgcaaaagacaaccttgactccaatgaaacggaagaccgtaaggacagg
atccgtcctgaattcaaggaagacccaaccttcaaacgcctcatttcctacaaccacacg
gctgtccacattcccacggacatctacgagggctccaccattgtgctgaacgagctgaac
tggactgagcagctggaggaggtcttcaagaagaatcgggaagaggatccaacgttgctc
tggcaggtgtttggcagcgccactggcctggctcgctacttccctgcttccccatggatc
gactcaaggaaaacaagtaaaatcgacttatatgatgtccgccggcgaccatggtatata
caaggtgctgcatccccgaaggacatgctgattcttgtagatgcaagcggaagtgtgtca
ggactgactctcaaactgatccggacctctgttagcgagatgctggagaccttgtcagat
gatgactatgtcaatgtggcctatttcaacgccgaagccaacagcatcacgtgctttgac
cacctcgttcaagccaacgtccgcaacaagaagatcttgaaggacgccgtccagaacatc
acagccaaagggatcaccagctacaaactgggttttgagtatgcattcaagcagttttta
aatcctaacgtgacaagtgcaaactgcaacaagatcatcatgctgttcacggacggcggg
gaggagagggcacaggagatctttgagaagtacaatcaagacaaaaaggtgcgtgtcttc
accttctctgtcggacagcacaattacgacaaagggcccatacagtggatggcgtgtacc
aacaaaggttattactacgagattccctccattggggccatcagaatcaatactcaagaa
tacctggatgtattgggcagacccatggttctggctgatgagaaggcaaaacaggtccag
tggaccaacgtctacctggatgcactggagcttggcctggtcatcacaggaacactgccg
gtcttcaacaaaactgaaacgaaggtcaccaaagacagaacccagaaaaaggtccagaac
cagctgatcctgggagtgatggcgattgacgtgtccttggaagacattaagaggctaacg
ccacgcttcactctcggccccaacggatactattttgcgattgaccccaacggctacgtc
ttgctccacccaaacctccagccaaagattgccaaatttcaggagcctgttaccctggac
ttcctagatgctgagctggagaatgagattaaagtggagatcagaacaaacatgattagc
gggaagactggagaaaaatggttggagacgcttgtgaagtcccaagatgagagatacatc
gaccattgcagcagaacctacacctggtctccagtgaacagcacagattacagcctagcg
ctggtgctgccggaatacagcatgcactatatccacgccaccatcggggacacaatcacg
caggccaaatcatttttggaggaaaaggtctttgaaagcatgcaagtggagaactttgag
gacaatgggtacacattcattgcccccagggaatactgcaaggacctgaagatattggac
aacaacacagagttcctcatggacttcaatgagttcattgacaagcaaacaccaaacggt
ccctcatgcaatgtgtctctggtcaaccgcctgctcctggatgctgggttgaccaccaag
ctggtccagttgtggaagatgcaggacccgcagggggtcctcgccaggttcgtggccaca
gacggcggtatcacacgtgtttacccaaagagtgctggagagacatggacagagaatcca
gagacctatgaatcaagcttctacaagaggagcttggacaatgatatatacatcttcacc
gctcctttttacaatgaaagcggggcagctgccattgaattcggcatcctgatcagcaga
tcagtagatctgaacattgatggagtgaagctgaagccggctgtggttggcatcaaactc
agtgttacagactggatggcgaacttcacgagcattactgtcaaggaaaattgcaaggat
gagatctgtggctgcttgaggaacgatgagcacatcgactgtgtcattttggatgacggt
ggcttcctcctgatgtccaatcaggatgattacatcagtcagatcggccgcttctttggc
gaagtcgacccgatcctgatgaagactctggtgaacacatccctgtactccttccataag
acgtatgactaccagtcagtgtgcaagcgtgaaagggagacgaaagctgcagccggcctt
cgctccgtctatgtgcccacaatagcagacatcctccaggtgggctggtgggccacagcg
gcggcctggtcgatactgcagcagctacttgttagtctcacatttccaagcttcctggaa
gcagccgacacggaggacgacttctccgagttccactccaaggagagctgcatcacggag
cagacacagtactactttgagggcagtgaaaggtcctatgccggggtgctggactgtgga
aactgttccaggatgtatcatgctgaaaaactccagagcacaaatttagtgttcctcatc
atggacagtaagaaaacctgcccatgtgagcaaaaccagaagccactgattcaagcagag
cagcagtccacgggcccagatccttgcaagctagcagagaaccctagatacagaaagggg
cccgaagtgtgttttgataacgatgaaaatgaggactattctgactgtggcggatgttcc
ggactgactccgccgctctgggccatggtagtcattcagctgctgttgctgtggctcctg
agcagctccacagactatgcgtcgtga
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