KEGG   Scleropages formosus (Asian bonytongue): 108923254
Entry
108923254         CDS       T04919                                 
Symbol
tardbp
Name
(RefSeq) TAR DNA-binding protein 43 isoform X1
  KO
K23600  TAR DNA-binding protein 43
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108923254 (tardbp)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108923254 (tardbp)
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     108923254 (tardbp)
SSDB
Motif
Pfam: TDP-43_C TDP43_N RRM_1 RRM_7 Nup35_RRM_2
Other DBs
NCBI-GeneID: 108923254
NCBI-ProteinID: XP_029105635
LinkDB
Position
2:41247970..41252957
AA seq 424 aa
MGEMYIRVAEDENEEPMEIPSEDDGTVLLSSVAAQFPGACGLRYRSPVSQCMRGVRLVEG
VLHAPESNWGNLVYVVNYPKDNKRKMEEMDAASAVKIKRGIQKTSDLIVLGLPWKTSEQD
LKDYFGTFGEVIMVQVKRDPKSGNSKGFGFVRFADYETQVKVMSQRHMIDGRWCDCKLPN
SKPCPVARWGLCALTQPLSPSQQGPDEPLRSRKVFVGRCTEDMTAEDLREFFMQYGEVTD
VFIPKPFRAFAFVTFADDQVAQSLCGEDLIIKGVSVHISNAEPKHGNSRQMMERGRFGGF
GGHGFSRGGMGNSGMGGGGSAGVNLGALSLNPAMMAAAQAALQSSWGVMGMLASQQGQTG
ASGGGASAGQGSGPSREQGQAFGSAAGSAGLAWGAASNAAGGASGGFSSSFGSSLDTKSS
GWGM
NT seq 1275 nt   +upstreamnt  +downstreamnt
atgggcgagatgtacattcgcgtggcggaggacgagaacgaggagcccatggagatcccg
tccgaggacgacggcacggtgctgctgtccagcgtggccgcgcagttcccgggcgcgtgc
ggcctgcgctaccgcagccccgtgtcgcagtgcatgcgcggagtgcgcctcgtggagggc
gttctgcacgcgcccgagagcaactggggtaacctggtctacgtggtgaactacccgaaa
gataataaaaggaagatggaggagatggatgcggcctcagcagtgaagataaagcgtggc
attcagaagacgtcggacctcatagtgctcgggctgccatggaagacctctgagcaggat
ctgaaagattactttggcacattcggggaagtgatcatggtgcaggtgaaaagagatccc
aaatcggggaactcgaagggttttggttttgtgcgcttcgccgattacgagacacaggtg
aaagttatgtcccagcgacacatgatcgacggccggtggtgtgactgcaagctacccaac
tccaagccgtgtccagtggctcgctgggggctgtgtgcactaacgcagcccctttccccg
agccagcagggcccggatgagcctctgcgcagccggaaggtgtttgttggccgctgcacc
gaggacatgacggccgaggacctgcgtgagttcttcatgcagtatggcgaggtcacggac
gttttcatccccaagccattccgtgcatttgcctttgtcaccttcgctgacgaccaggtg
gcccagtcgttgtgcggagaggacctgatcatcaagggcgtcagcgtgcacatctccaac
gcagagcctaagcacggcaatagtaggcaaatgatggaacggggccgcttcggggggttc
gggggccacggcttcagtcgtggcggcatggggaacagcgggatggggggaggcggtagc
gccggtgtcaacttgggggcgctgagcctgaacccagccatgatggcagcagcgcaggcg
gcgctacagagcagctggggagtgatgggcatgctggccagccagcaggggcagacaggt
gcctcggggggcggagcctcggcaggccagggctccggcccttcccgcgagcagggccaa
gccttcggctcagctgccggctcggccgggttggcctggggggcagcctccaatgcagcc
ggcggcgccagcggagggttcagctccagcttcggctccagcttggacaccaagtcatca
gggtggggcatgtag

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