Scleropages formosus (Asian bonytongue): 108924720
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Entry
108924720 CDS
T04919
Name
(RefSeq) slit homolog 1 protein
KO
K06838
slit 1
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sfm00536
]
108924720
Glycosaminoglycan binding proteins [BR:
sfm00536
]
Heparan sulfate / Heparin
Axon guidance molecules
108924720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
Laminin_G_2
Laminin_G_1
LRR_1
LRRNT
LRRCT
hEGF
EGF_TEN
LRR_9
LRR_14
LRR_EndoS
EGF_Teneurin
EGF_DL_JAG
EGF_2
Motif
Other DBs
NCBI-GeneID:
108924720
NCBI-ProteinID:
XP_029106017
LinkDB
All DBs
Position
3:complement(2551891..2632830)
Genome browser
AA seq
1539 aa
AA seq
DB search
MPRGSDRAGAEPGQAGGRGGRRWPLVAWAALALGHIGAVATCPALCTCSGTTVDCHGLGI
KSVPRNIPRNTERLELNGNNLTRISKSDLAGLKHLRVLQLMENQISTIERGAFDDMKELE
RLRLNRNQLQQLPELLFQKNAALSRLDLSENAIQAIPRKAFRGATDIKNLQLDKNQIGCI
EDGAFRAMRGLEVLTLNNNNISTIPVSSFNHMPKLRTFRLHSNNLRCDCHLAWLSQWLRQ
RPTMGLFTQCSTPPMLRGLNVAEVQKHEFACSGHSESATPQPCSLAAGSCPPMCSCSNNI
VDCRGKGLTAIPANLPEGMAEIRLEQNGIKSIPPGAFSPYKKLRRIDLSNNQISEIAPDA
FQGLRSLNSLVLYGNKITELPKGVFDGLTALQLLLLNANKIHCVRASTFQDLQNLSLLSL
YDNKIQTLSKGTFSSLRAIQTLHLAQNPFICDCNLKWLADYLRSNPIETSGARCASPRRL
ANKRIGQIKSKKFRCSAKEQYYIPGAEDTRLNTDCGSDPVCPPKCRCEAGVVDCSNLRLT
KIPEHIPASTAELRLNNNEISVLEATGVFKTLTQLKKINLSNNKITEIEDGAFEGAASVS
ELHLTANQLDSVRSGMFRGLEGLRMLMLRNNRISCIHNNSFTGLHNVRLLSLYDNQLTTI
TPGAFDTLQALSTLNLLANSFHCDCRLSWLGEWLRSRKIVTGNPRCQRPAFLKEIPLQDV
ALPDFRCEEGQEEANCMPRPQCPSECTCLDTVVRCSNKHLRGLPRGVPRNVTELYLDGNQ
FNMVPKELSSFKHLQLVDLSNNKISSLSNSSFANMSQLTTLILSYNSLRCIPALAFAGLR
SLRLLSLHGNNISELPDGVFSDVASLSHLAIGANPLHCDCRLRWLSDWVKTGYKEPGIAR
CTGPSGMEGKLLLTTPAQKFECHGEVDPAVLAKCSPCVSAPCQNQGACHSDPLEVYRCTC
APGFKGKNCEVMLNACASNPCSNGGTCQASWEEDGAFSCSCPHGFEGAACEVDVDDCEDN
DCENGATCVDGVNNYTCVCGPLYTGELCEDMVDMCAHGRSPCQHHSTCLITVTGPRCVCS
PGYVGNNCSVDYDDCAEHRCQNGARCVDEVNGYTCICTPGYSGQLCELSPTPRSLCDLAE
CQNGAPCMERGGRAMCQCLPGFGGLRCEKLVSVNFVDRDSYLLLGDLKNRPQANITLQVS
TAEDNGILLYNGDNDHIAVELYQGHVKVSYDPGSQPGHAIYSAETINDGLFHTVELVTFD
QMVNLSIDGGLPTTMDSFGVVRPLKGEAPLYVGGMPVDVHSATFRLWQLQNGSSFHGCIR
NLYINNELQDFTKTQMKPGVVPGCEPCRKLYCLHGICQPNGATGPVCHCQPGWSGPHCDL
PASNPCQGSKCVHGTCIPLDEQSYRCECLEGYRGALCNQQGAASNPCLGVQCTHGRCQVS
DDGKAYCHCESGYSGQLCDTVSECRGEPVRDFHQVQRGYAICQTTRMLSWVECVGVCPSG
ACCSTQRLKRRKYTFECSDGSSFAEEVEKTIKCGCTGCV
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggggaagtgaccgcgccggggccgagccggggcaggccgggggccgcgggggg
cgccgctggccactggtggcgtgggctgccttggcactggggcacattggcgcggtggcg
acgtgtccggcactgtgcacctgcagcggcaccacggtggactgccacggcctggggatc
aagagcgtgccccggaacattcccaggaacacagagaggctggagcttaatgggaacaac
ctcacacggatctccaagagtgacctggctggcctgaagcatctccgcgtcctgcagctg
atggaaaatcagatcagtaccatcgagcgaggagcctttgacgacatgaaagagttggag
agactacgactgaaccgaaaccaacttcaacaactcccagaattgctgttccaaaagaat
gcagcactctctcgactggacctgagtgagaatgccatccaggccattccccggaaagcc
ttccgcggagccacggacatcaagaaccttcagctggataagaaccaaatcggctgcatt
gaagacggtgccttccgagccatgaggggcctcgaggtcctgactctgaacaacaacaac
atcagcaccatccctgtatccagcttcaatcacatgcccaagctgcgcaccttccgtctg
cattccaacaacctgcgctgtgactgccacctggcctggctatcgcagtggctgcgccag
cgccccaccatgggcctgttcacccagtgcagcacaccgccgatgctgcgaggccttaat
gtcgccgaggttcagaagcatgagtttgcctgctcgggtcactctgagtctgcgacaccc
cagccctgcagcctggcagccggatcctgccctcccatgtgctcgtgcagcaacaatatt
gtcgattgccgggggaaaggtctgactgccatcccagccaacctgccggagggcatggct
gaaatacggctcgagcagaacggcatcaagtccatccccccgggagctttctctccttac
aagaagctgcgcagaatagacctcagcaacaaccagatctcggagatcgcccccgacgca
tttcagggcttgcgttccctcaactccctggttttatatgggaacaagatcacagagctg
cccaagggtgtatttgatggcctgactgccctgcagttgctgctgctaaatgccaataag
atccactgtgtccgggccagtacgttccaggacctgcagaacttgtctctgctttctctg
tacgacaacaagatccagaccctgtccaaaggcaccttctcttcacttcgggcaattcaa
acactacacctggcccagaaccccttcatctgcgactgtaacctgaagtggctggccgac
tacctgcgctctaaccccatcgagacgagcggtgcccgctgtgccagtccgcggcggctt
gccaacaagcgcatcggccagatcaagagcaagaagtttcgctgctcggctaaggagcag
tactacatcccaggtgcagaggacacccgactcaacacggactgtggcagtgaccctgtg
tgtcctcccaagtgccgctgtgaggccggtgtggtagactgctccaacctgcgtcttacc
aagattcccgagcacatcccggcttccacagctgagctacgcctcaacaataatgagatt
tcagtcctggaagccacaggagtcttcaagactcttacccagctcaagaagattaacctg
agcaacaacaagatcacagagatcgaggacggcgcgtttgaaggagcagcatccgtcagt
gagcttcacttaaccgcgaaccagctggactcggtgcgcagtgggatgttccgggggctg
gaggggctgcgcatgttaatgctccggaataaccgcatcagctgcatccacaacaacagc
ttcacagggctgcacaacgttcgcctgctgtcgctgtatgacaaccagctgacaacaatc
actccgggagcttttgacacgctgcaggccctgtccacactgaacctgttggccaactcc
ttccactgtgactgccgcctgtcctggctcggggagtggctgcgcagccgcaagattgtg
acaggaaacccccggtgtcagcgacctgccttcctcaaggagatcccgctacaggacgtg
gcgttgcccgactttcgttgcgaggaggggcaggaagaggccaactgcatgccacgtcca
cagtgtcccagcgagtgcacctgcctggacacggtggtgcgctgcagcaacaagcacctg
cgtggcctgcccaggggtgtacctcgcaatgtcactgagctgtacctggatggaaaccag
ttcaacatggtccccaaggagctgtccagcttcaaacacctgcagctggtggacctgagc
aacaacaagatcagctccctgtccaactcctccttcgccaacatgagccagctcaccacg
ttgatcctcagttacaattctcttcggtgcatccctgctttggcctttgctggtctccgc
tcactcaggctgctgtcgctgcatggcaacaatatctcagagctgcctgacggcgttttc
agcgacgtggcctcactctcacacctggcgatcggcgcaaacccgttgcactgtgactgc
cgcctgcgctggctgtctgactgggtgaagacaggttataaggagcctggcatcgcccgc
tgcactggcccatcaggcatggagggcaaactgctgctgactacacccgcccagaagttt
gagtgtcatggcgaggtggaccccgctgtgctggccaagtgcagtccatgtgtgtcggct
ccgtgccagaaccagggcgcctgccacagcgaccccctggaggtgtataggtgcacctgt
gcccctggattcaagggcaaaaactgtgaggtaatgctcaacgcctgcgccagcaacccc
tgctccaatgggggaacctgccaggccagctgggaggaggacggggccttcagctgctcc
tgcccccatgggttcgaaggggccgcttgcgaggtcgacgtggacgattgcgaagacaat
gactgcgagaacggtgccacctgcgtggatggggtgaacaactacacctgtgtgtgcggc
cccctgtacacaggggaactgtgtgaggacatggtggacatgtgcgcacatgggcgcagc
ccctgtcaacatcactccacctgtctcatcacggtcaccgggcccaggtgtgtgtgctct
cctgggtacgtgggcaacaactgcagcgtggactatgatgactgtgcagagcatcgctgt
cagaatggcgcacgctgtgtggacgaggtcaacggctacacgtgcatctgcacaccaggg
tacagcggacagctatgtgaactgtccccgacgccccgctccttgtgcgacctggcggaa
tgccagaacggcgccccctgtatggagcgagggggtcgagcgatgtgccagtgcctgccc
gggttcgggggcctgcgttgcgagaagctcgtcagcgtcaactttgtggacagggactcg
tacctgctgctcggggacctcaagaacaggcctcaggccaacatcacactgcaggtgtcc
acagcggaggacaacggcattctgctctacaatggagacaacgaccacattgctgtggag
ctctaccaaggtcacgtcaaggtcagctacgacccgggaagccagcctggccacgccatc
tacagtgcggagaccatcaacgacgggctcttccacacggtggagctcgtcacctttgac
cagatggtgaacttgtccatcgatggcggcctccccaccaccatggacagttttggggtg
gtgcggccactcaaaggggaagcgccgctatatgtaggggggatgcccgtggacgttcac
tcggccacgtttcgtctctggcagctccagaacggctccagcttccacggctgcatccgc
aacctatacatcaacaacgagctgcaggacttcaccaagacccagatgaagcccggcgta
gtgcccgggtgcgaaccgtgtcgcaagctctactgcctgcatggcatctgccagccgaac
ggcgccacaggccccgtgtgccactgccagcccggctggagcggaccgcactgcgacctg
ccagccagcaacccctgccagggcagcaagtgtgtccatgggacctgcatccccctggac
gagcagtcgtatcgctgtgagtgcctggagggctacaggggcgccctgtgtaaccagcag
ggggcagcgtcgaacccttgcctaggtgtgcagtgcacgcatggccgctgccaagtgtcg
gacgacggcaaggcctactgccactgcgagagcggctacagcggacagctgtgtgataca
gtgtcggagtgccggggggagcctgtgagggacttccaccaagtccagcgcgggtacgcc
atctgccagacgacacgcatgctctcctgggtcgagtgtgtgggtgtgtgtccttcgggg
gcctgctgctccacccagaggctcaagcgcaggaagtacacctttgagtgcagcgatggc
agctccttcgccgaggaagtggagaagaccatcaagtgcggctgcacgggctgcgtgtag
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integrated database retrieval system
