Scleropages formosus (Asian bonytongue): 108925239
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Entry
108925239 CDS
T04919
Name
(RefSeq) protocadherin gamma-C5-like
KO
K16497
protocadherin gamma subfamily C
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfm04515
]
108925239
Cell adhesion molecules [BR:
sfm04515
]
Cadherins
Protocadherins
108925239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF7499
Motif
Other DBs
NCBI-GeneID:
108925239
NCBI-ProteinID:
XP_029113266
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Position
13:11694600..11697774
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AA seq
821 aa
AA seq
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MGTRTWRKRWECQALWCLDFFLMWNTIDAHIRYTIPEELNVGSVVGNLAKDLGFGVAEIS
DRNLRISTESGKQYFSVDLEKGELAVNERIDREELCGQSTSCLMPLEVIIENPLQLYRVE
IEVQDINDNVPHFHTKENVLKIAESTVPGARFSLEAAQDPDVGSNSLRSYGLNKNEYFSL
NVLTHNDGTKVPELILEKSLDREKLSVHKLILTAVDGGIPATSGSTQLTIQVLDINDNTP
VFSNALYEISVNENTPKGTVIGSVKATDLDEGSNGDIEFSFASRTLEPVLKTFSINPFTG
EIALNDSIDYEEINSYKFTIRASDKGSPSMESHCTVRVDVLDINDNVPEIILKSLPSPIK
EDAPVGTVVALISVKDLDSADNGKVTVSMVSESPFKLKPSVSNHYALVTDSGLDREKFPE
YNVELIASDSGSPPLTALKVLTVSVLDVNDNRPVFSQPSYTVYVNENSTPGTVLCSVSAS
DSDLGDNAKISYSVLDSKVQDASVSSYVYINSDNGSIYSMHSFDYEKLKVFQIHVQAKDH
GSPSLSSNVTVHVFILDQNDNVPAVIYPFAVMGSVSHQKMPRSAKAGHLVTKVTAVDADS
GHNAWVSYKLVEATDASLFSVNLYTGEVRTKRAVSEQDDSSHRLLIEIKDNGEPVQSATV
TVGISLEDGVHEPILDFRQHKSHEPASKSNKITFYLIVSLASVSAVSFLTFAILAVRCIR
SSASRACCCVRRGDSDEYNNPNRNLHIQLNTDGPIKYVEVLGGDMLSQSQSFRSCLSPVS
EFSDFTFVKPSSTTDFKEMINVLDASLPDSAWTFESQQVSV
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atggggacgcggacatggagaaagagatgggaatgtcaggctttgtggtgtctcgatttc
ttcctcatgtggaatacaatagacgctcatattcgctacaccattcctgaggagctcaat
gtgggttctgttgttggaaatctagctaaggatctgggctttggagttgcagagatttct
gaccgcaatctgcggatctccacagagtctggtaagcagtatttcagtgtggatttggag
aagggtgagctggctgtcaatgaaagaatcgacagagaggagttatgtggacaaagcacg
agctgcctgatgcctttggaggttataattgaaaatcctttgcaattgtatcgcgtagag
atcgaagtacaggatattaatgacaatgttcctcattttcatacaaaggaaaatgttttg
aaaatcgcagagtccacggtaccaggagcgcggttttcgttagaagcggctcaggacccc
gatgtcggatcgaattcattaaggtcctacggtttaaataaaaatgaatatttctctttg
aatgtcttaactcacaatgacggaacgaaggttcctgaactcattttagaaaaatctctg
gacagagagaaactctccgtccacaagcttattctcacggcagtagatggaggcattccg
gctacatcaggctcaacacaactgactattcaggtcctggacattaatgacaatactcca
gtgttcagcaacgctctatatgaaatttcggtgaatgaaaataccccaaaaggcaccgta
atcggcagcgtaaaagccactgatttagacgaaggttcaaatggtgatatcgagttttct
tttgcttcgaggacattagaaccagtactgaagacgttcagtataaatccatttactggc
gaaattgcactaaatgactcgatagattacgaagaaataaactcatataaatttacaatc
cgcgcaagtgacaaaggctccccgtcgatggaaagccactgtactgttcgagtggacgtt
ctggatattaatgataacgtccctgagatcattttgaaatctttgcctagtccgatcaag
gaagacgcgcctgtcggaactgtcgtcgcgttgattagtgtaaaggatctggattctgca
gacaacggtaaagtgacagtaagcatggtttccgaaagcccatttaaactcaaaccgtct
gtttcgaatcactacgctttggtcactgattccggtttagatcgcgaaaaattcccagaa
tataacgtagagcttatagcatcggattctggatcaccgcctctcacggcactaaaagta
ttaactgttagtgtcctagatgtaaatgacaaccgtccagttttctcccaaccttcctac
acagtttatgtgaatgaaaacagcaccccaggaactgtcctgtgttcagtgtctgcttct
gattcagacctgggcgacaacgcgaagatctcgtattccgtcttagactccaaagtgcag
gacgcgtcggtctcctcatacgtttacattaattcagacaacggcagcatctacagcatg
cactcattcgactatgagaaactcaaggtgtttcagatccacgttcaggccaaggaccac
ggctctccgtctctgagcagcaacgtcactgtccacgtgtttatcctggaccagaatgac
aatgtccccgctgtcatttacccctttgccgtcatgggctccgtgtcccatcagaagatg
ccgcgatcggcgaaagcgggacacctcgttaccaaggtgacggccgtggacgctgactcg
ggacacaacgcctgggtttcctacaaactggtggaggccacagacgcctccctcttcagt
gtgaatctctacacgggggaggtgaggactaaacgagccgtttcggagcaggacgactct
tctcacaggctgctcatagagataaaggacaacggggaaccggtccagtccgccacggtc
acagtgggcatatcgctagaggacggggtccacgagcccatcttggatttccggcagcac
aaaagccacgaaccggccagtaagagcaataaaatcaccttttatttgatcgtctctctg
gcgtccgtgtccgcggtgtcctttttgacttttgccattttagcggtgagatgtatcagg
agcagcgcaagtcgtgcgtgttgctgtgtgagacggggagactcggatgaatacaataat
cccaacagaaacctgcacatccagctcaacactgacgggcctattaagtacgtggaggtg
ctgggaggagacatgttgtctcagagtcagtccttcaggtcctgcctgtctccagtgtcc
gagttcagtgacttcaccttcgttaaacccagcagcaccacagattttaaggagatgata
aacgtgcttgacgcgtcactgcctgacagcgcctggacttttgagagccagcaggtgagc
gtttag
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