KEGG   Scleropages formosus (Asian bonytongue): 108926071
Entry
108926071         CDS       T04919                                 
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03420  Nucleotide excision repair
sfm04110  Cell cycle
sfm04114  Oocyte meiosis
sfm04120  Ubiquitin mediated proteolysis
sfm04141  Protein processing in endoplasmic reticulum
sfm04310  Wnt signaling pathway
sfm04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108926071 (rbx1)
   04120 Ubiquitin mediated proteolysis
    108926071 (rbx1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    108926071 (rbx1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    108926071 (rbx1)
   04350 TGF-beta signaling pathway
    108926071 (rbx1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    108926071 (rbx1)
   04114 Oocyte meiosis
    108926071 (rbx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfm04121]
    108926071 (rbx1)
   03400 DNA repair and recombination proteins [BR:sfm03400]
    108926071 (rbx1)
Enzymes [BR:sfm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     108926071 (rbx1)
Ubiquitin system [BR:sfm04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   108926071 (rbx1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     108926071 (rbx1)
   Cul2 complex
     108926071 (rbx1)
   Cul3 complex
     108926071 (rbx1)
   Cul4 complex
     108926071 (rbx1)
   Cul7 complex
     108926071 (rbx1)
   Cul8 complex
     108926071 (rbx1)
   Cul9 complex
     108926071 (rbx1)
DNA repair and recombination proteins [BR:sfm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      108926071 (rbx1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      108926071 (rbx1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 108926071
NCBI-ProteinID: XP_018594050
UniProt: A0A8C9RJ32
LinkDB
Position
3:29871860..29873580
AA seq 108 aa
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgctatggatgtggatactccaagtggcgctaatagcggagctagcaagaaa
cgttttgaagtgaagaagtggaatgctgtggcgctctgggcttgggacattgtggttgac
aactgtgcaatttgtcggaatcatattatggatctctgtatagagtgccaggccaaccaa
gcatctgctacatctgaggagtgcacagttgcctggggtgtctgcaatcatgctttccat
ttccactgcatctctcgttggctgaagacgcgtcaggtgtgtcctctggataacagggag
tgggaatttcaaaagtatggacactaa

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