Scleropages formosus (Asian bonytongue): 108926071
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Entry
108926071 CDS
T04919
Symbol
rbx1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03420
Nucleotide excision repair
sfm04110
Cell cycle
sfm04114
Oocyte meiosis
sfm04120
Ubiquitin mediated proteolysis
sfm04141
Protein processing in endoplasmic reticulum
sfm04310
Wnt signaling pathway
sfm04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108926071 (rbx1)
04120 Ubiquitin mediated proteolysis
108926071 (rbx1)
09124 Replication and repair
03420 Nucleotide excision repair
108926071 (rbx1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108926071 (rbx1)
04350 TGF-beta signaling pathway
108926071 (rbx1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
108926071 (rbx1)
04114 Oocyte meiosis
108926071 (rbx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfm04121
]
108926071 (rbx1)
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108926071 (rbx1)
Enzymes [BR:
sfm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
108926071 (rbx1)
Ubiquitin system [BR:
sfm04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108926071 (rbx1)
Multi subunit type E3
SCF complex
Ring finger protein
108926071 (rbx1)
Cul2 complex
108926071 (rbx1)
Cul3 complex
108926071 (rbx1)
Cul4 complex
108926071 (rbx1)
Cul7 complex
108926071 (rbx1)
Cul8 complex
108926071 (rbx1)
Cul9 complex
108926071 (rbx1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
108926071 (rbx1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
108926071 (rbx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
DUF8003
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
108926071
NCBI-ProteinID:
XP_018594050
UniProt:
A0A8C9RJ32
LinkDB
All DBs
Position
3:29871860..29873580
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGANSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgctatggatgtggatactccaagtggcgctaatagcggagctagcaagaaa
cgttttgaagtgaagaagtggaatgctgtggcgctctgggcttgggacattgtggttgac
aactgtgcaatttgtcggaatcatattatggatctctgtatagagtgccaggccaaccaa
gcatctgctacatctgaggagtgcacagttgcctggggtgtctgcaatcatgctttccat
ttccactgcatctctcgttggctgaagacgcgtcaggtgtgtcctctggataacagggag
tgggaatttcaaaagtatggacactaa
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