Scleropages formosus (Asian bonytongue): 108928317
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Entry
108928317 CDS
T04919
Name
(RefSeq) 72 kDa type IV collagenase-like
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
108928317
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfm01002
]
108928317
Enzymes [BR:
sfm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
108928317
Peptidases and inhibitors [BR:
sfm01002
]
Metallo peptidases
Family M10
108928317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_4
Reprolysin_3
Reprolysin_5
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
108928317
NCBI-ProteinID:
XP_029107968
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Position
5:complement(31322176..31345512)
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AA seq
709 aa
AA seq
DB search
MSEGAQRASSQRRHTAARTEPSRTEPYRAETAPPDPSPPPSPPLSACPAPTDMSSSRGSS
AHLVLRLLALQLLGCGLSAAAPSPIIRFPGDDTVPKSDKEVALHYLNKFYGCPQDRCNLM
VLKDTLKKMQKFFSLPETGEIDQRTVEIMKKPRCGVPDVANYNFFPSKPKWGKNTLTYRI
LGHTPDLDEEVIDDAFFRAFKVWSDVTPLKFTRIMDGEADIMINFGRNEHGDGYPFDGKD
GLLAHAFAPGQGIGGDSHFDDDEQWTLGEGQVVKVKFGNAEGEFCKFPFLFMGQEYNSCT
TQGRDDGFLWCSTTYNFDEEGKYGFCPHELLFTLGGNGDGAPCKFPFTFQGEKYHGCTTE
GRSDGYRWCATTEDYDRDKSYGFCPETALSTVGGNSEGGPCTFPFTFLGNTYDACTSSGR
SDGKMWCATTKSYDEDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSQDTTALMAPIYTYT
KNFRLSSDDIRGIQELYGASTDKPLPPTQGPITPMDFCDEDIIFDAVAQIRGETFFFKDR
YVFQTSNFRAKPRGPMLVKTFWKELPDRIDAAYENPLEKKTVFFAGNQVWVYSANTLERG
YPKTLSSLGLPGDLQHIDAAFSFSKSQKTYLFAGDQFWRYNEAKKRMDPGFPKLIADAWN
GIPDNLDAAFSLDGNGFSYFFKNSYYLKLDDATLKIVKVGDVKSDWLGC
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggagcgcagcgcgcgagcagccagcgcagacacacggcagcgcgcacagag
ccgagccgaaccgagccctaccgagccgagaccgccccccccgacccatcgccgccgccg
tcgccgccgctctcagcttgtcccgctccgaccgacatgagctccagccgcggctcctcc
gcgcacctcgtgctgcggctgctggcgctacagctactcggatgcgggctgagcgcagcc
gccccgtcgcccatcatccggttccccggagacgacacggtgcccaagtcggacaaggag
gtggcgctgcattacctcaacaagttctacggatgtccacaagacaggtgcaacctcatg
gtactcaaagacacactgaagaaaatgcagaagttcttctccctgccagagacaggcgag
attgaccagaggacggtggagatcatgaagaagcctcgctgcggagtcccagatgttgct
aattataacttcttcccttcaaagccaaagtggggcaagaacacattaacatacaggata
ctggggcacactcctgatctggacgaagaggtcatcgatgacgcctttttccgggccttc
aaagtttggagtgatgtcaccccgctcaagttcacgcgcatcatggatggggaagctgac
ataatgatcaattttggacgtaatgagcatggtgacggctaccccttcgatgggaaagat
ggcctcctggctcacgcgtttgcccccggccaggggataggcggtgactcccacttcgat
gacgatgagcagtggacacttggagaaggacaagtggtgaaggtcaagtttggcaatgcg
gagggggagttctgcaagtttccgttcctcttcatgggccaggagtacaacagctgcacc
actcagggtcgcgatgacggattcctctggtgctccaccacctacaacttcgacgaggaa
gggaagtacggcttctgcccccacgagctgttgttcaccctggggggtaatggggacgga
gccccctgcaagttccccttcactttccagggggagaagtaccacgggtgcacgacggag
gggcgcagcgatggttaccgatggtgcgccaccacggaggactacgaccgggacaagagc
tatggcttctgccccgagaccgccttgtcaactgtgggagggaattctgaaggagggccc
tgcaccttccccttcaccttcttgggcaacacctacgatgcgtgtacctcttcgggacgc
agcgatgggaagatgtggtgcgccaccacaaaaagctatgatgaagatcgcaaatgggga
ttttgccctgaccaaggctacagcctctttctggtagcagcccatgagtttggtcatgct
ctgggtctggagcactcgcaggacaccacagcattgatggcccccatctacacctacacc
aagaacttcaggttgtccagtgatgacatcaggggcatccaggagctctatggtgcctca
acagacaaaccccttccacccacccagggtcccatcacacccatggatttttgcgatgag
gacattatttttgacgctgtagcccaaatcagaggagagacgttcttttttaaggacaga
tacgtattccagacctccaacttccgtgccaaacccagaggcccgatgctggttaagacc
ttctggaaggagctgccggaccgcatcgatgccgcctatgagaacccattagagaagaag
acggtcttctttgcaggtaaccaggtgtgggtttactcggcgaacacgctggagaggggc
tatccaaagacgctctcctcactgggcctgcctggcgacctgcagcacatcgacgccgcc
ttctccttcagcaagagtcaaaagacgtacctgttcgctggggaccagttctggaggtac
aatgaagccaagaagaggatggacccagggttcccgaagcttattgcagacgcttggaac
ggcatcccagacaatttagacgctgcattcagcctggatgggaatggcttcagctacttc
ttcaaaaactcctactatctgaagctggatgatgccactcttaagatcgtcaaagtcggg
gacgtgaaaagcgactggctcggctgctga
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