KEGG   Scleropages formosus (Asian bonytongue): 108928992
Entry
108928992         CDS       T04919                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3H-like
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    108928992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108928992
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108928992
SSDB
Motif
Pfam: APOBEC2 NAD1 APOBEC_N NAD2 SNAD4 APOBEC3 APOBEC4 APOBEC_C APOBEC4_like APOBEC1 dCMP_cyt_deam_1 RhoGEF MafB19-deam
Other DBs
NCBI-GeneID: 108928992
NCBI-ProteinID: XP_029112749
LinkDB
Position
12:complement(17902218..17904256)
AA seq 251 aa
MVQSLFWKHIPLSRFVPKDRFYQEFNNRVQSSKTLLCFSLGQTNKVLWDFWGHTYNNPGC
DHAETVALRAIKDFLKQCREEMSRKYELTMYLSFSPCAGCCKRLTAFVRSESAVQVSILV
SRLYFPQYRDTRENLRQLVHSGIRLEVMGRKDFEKCHHLFVDYCSNFEEWPELDEESENG
RAVLQGILQECEEESHSQSDDLESSIWLSLTPVDAGTSWTSQEPETPQKAPSVASDTGYA
QGVKRKLFDFC
NT seq 756 nt   +upstreamnt  +downstreamnt
atggtccagagccttttctggaagcatattccactaagcaggtttgtaccaaaggacaga
ttttaccaggagttcaacaatagagtgcagagctcaaaaacattgctgtgtttcagcttg
ggtcagaccaacaaggttctctgggacttttggggacacacatacaataaccctggctgt
gaccacgcagaaaccgtagcactaagagccataaaagacttcctgaaacaatgtcgagag
gaaatgagtcgaaaatacgagctgaccatgtacctgtctttcagcccctgcgcgggctgt
tgcaaacgtctcacagcatttgtgaggtcggagagcgctgtgcaagtgagcatactggtg
tccagactctatttcccacagtacagggacactcgagagaacctgcgacagctggtgcat
tcggggatcaggctcgaagtgatgggcaggaaggactttgaaaagtgtcaccacctgttt
gtggactactgcagtaacttcgaggagtggcctgagctggacgaagagagtgagaatggc
cgtgctgttctgcagggtattttgcaggagtgtgaggaagagtctcattcacaatctgat
gacctagagagcagcatctggctgtcactgacacccgtagatgctggaaccagctggacc
tcacaagagcctgaaacaccacagaaagcccccagtgtggccagtgacacagggtatgcc
cagggggtgaagagaaagctttttgatttttgctag

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