KEGG   Scleropages formosus (Asian bonytongue): 108929927
Entry
108929927         CDS       T04919                                 
Name
(RefSeq) TNF receptor-associated factor 2-like
  KO
K03173  TNF receptor-associated factor 2 [EC:2.3.2.27]
Organism
sfm  Scleropages formosus (Asian bonytongue)
Pathway
sfm04010  MAPK signaling pathway
sfm04137  Mitophagy - animal
sfm04141  Protein processing in endoplasmic reticulum
sfm04210  Apoptosis
sfm04217  Necroptosis
sfm04621  NOD-like receptor signaling pathway
sfm04622  RIG-I-like receptor signaling pathway
sfm04920  Adipocytokine signaling pathway
sfm05132  Salmonella infection
sfm05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sfm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108929927
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    108929927
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    108929927
  09143 Cell growth and death
   04210 Apoptosis
    108929927
   04217 Necroptosis
    108929927
 09150 Organismal Systems
  09151 Immune system
   04621 NOD-like receptor signaling pathway
    108929927
   04622 RIG-I-like receptor signaling pathway
    108929927
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    108929927
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108929927
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    108929927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sfm03019]
    108929927
   04121 Ubiquitin system [BR:sfm04121]
    108929927
Enzymes [BR:sfm01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108929927
Messenger RNA biogenesis [BR:sfm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108929927
Ubiquitin system [BR:sfm04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    108929927
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf TRAF3_RING zf-C3HC4 zf-C3HC4_4 zf-RING_5 MAD zf-RING_UBOX zf-C3HC4_2 zf-RING_6 zf-RING_2 ATG16 GvpD_P-loop zf-C3HC4_5 Cyc-maltodext_C
Other DBs
NCBI-GeneID: 108929927
NCBI-ProteinID: XP_018600343
UniProt: A0A8C9V1A8
LinkDB
Position
6:12780267..12810265
AA seq 517 aa
MARVSPAPDPDPAPVGMPQQILAVPMQSKYQCQQCHELLRRPVQALCGHRFCVRCLAQLT
SSGPKPCEACRIEEIFEEPLSILNSSDAFPDNAARREIESLPANCPNEGCSWKGLVKEYE
AQHEGKCMFDRVPCKACRLLILRSEQEKHSERECEERTLNCKYCKASFNFKDIKAHDEVC
QKFPMQCKDCGKKKIPREKFPEHSKSCVKSKVACPFTAVGCRALVEHEKQAEHEQASAQE
HLRLLLDCLCQLRRQGDGPGEWQEDSGPGLYCAPEERPTATAASAKLTATLEQKTTALEN
IVCVLNREVERSSLTLEAFARQHRLDQEKIENLTNKVRQLERSLTLRDMQLSETEQKLRE
LEYCTHDGVFVWKITEFSRRRQEALAGRAPAMFSPAFFSSKYGYKMCLRLYLNGDGTGRG
THLSLFFVVMKGRFDALLKWPFSQKVTLMLLDQNNREHIIDAFRPDITSSSFQRPVSEMN
IASGCPLFCPLSKLAGKSSYLRDDTIFIKAIVDLSGL
NT seq 1554 nt   +upstreamnt  +downstreamnt
atggcccgcgtgtccccagccccagacccagatcccgccccagtgggaatgccgcagcag
atccttgctgttcccatgcagagcaaataccagtgccagcaatgccacgaactgctgagg
aggcctgtccaggccttgtgtggccatcgattctgtgtgcgctgcctagcgcagctcacc
agctcaggacccaagccctgcgaagcctgcagaatcgaggagatattcgaagagcccctc
tccattctcaacagcagcgatgcattcccagacaatgctgcaagaagagagatcgaaagc
ctccctgccaactgccccaatgagggctgctcctggaaaggacttgttaaggaatatgag
gctcaacacgagggcaagtgtatgtttgatcgggtgccgtgcaaggcgtgccgcctgctg
atcctgcgcagcgagcaggagaagcacagcgagagggagtgtgaggaaaggaccctcaac
tgcaagtactgcaaagcttcgttcaacttcaaggacatcaaggctcatgacgaagtttgt
cagaagtttccgatgcagtgtaaagactgtgggaagaaaaagatcccacgtgaaaagttc
cctgagcacagtaagtcctgtgtgaagtccaaggtggcctgtccattcaccgcggtgggc
tgcagagcgttggttgaacatgagaaacaagcggagcatgagcaggcaagcgctcaggag
cacctgcgtctcctgttggattgcctgtgccagctgcggcgccagggggatggtcctggc
gagtggcaggaggactcgggccctggactgtactgcgctccagaggagcggcccacagcc
actgctgccagtgccaagctgaccgccaccctggagcaaaaaacaacggcactggagaac
attgtttgcgtgctgaaccgggaggtagagaggagctctctcactttggaggcgttcgcc
cggcagcaccgcttggaccaggagaagattgagaacctgaccaacaaggtgcggcagctg
gagcgctccctgacgctgcgggacatgcagctgtctgagacggagcagaagctgcgtgag
ctggagtactgcacccatgacggcgtgtttgtttggaagatcacggagttctcacggcgg
cgacaggaagctcttgctggacgggcgccggccatgttctccccagctttcttctccagt
aaatatggctacaagatgtgtttgcggctgtacctgaacggcgatgggacgggccgcggg
acgcacctttctctcttcttcgtggtgatgaagggtcgattcgacgctctgctcaagtgg
cccttcagtcagaaggtgactctgatgctgttggaccagaacaaccgagagcacatcatc
gacgccttccggccggacatcacctccagctccttccagcggcccgtcagcgagatgaac
atcgccagcggctgtcctctcttttgcccgctgtccaaactggccggaaagagctcctac
ctgagagatgacaccatattcatcaaggccattgtagatctctcgggcctctag

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