Scleropages formosus (Asian bonytongue): 108934328
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Entry
108934328 CDS
T04919
Name
(RefSeq) short transient receptor potential channel 5-like
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sfm
Scleropages formosus (Asian bonytongue)
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfm01009
]
108934328
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfm04040
]
108934328
Protein phosphatases and associated proteins [BR:
sfm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108934328
Ion channels [BR:
sfm04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
108934328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_3
Ank_4
PKD_channel
YVC1_C
LHD_TRPY1
Motif
Other DBs
NCBI-GeneID:
108934328
NCBI-ProteinID:
XP_018607473
LinkDB
All DBs
Position
4:complement(38171405..38212116)
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AA seq
1029 aa
AA seq
DB search
MNPMAQLYYKKVNYSPYRDRIPLQIVRAEAELSPEEKAYLTAVEKGDYAGVKHALQEAEI
YYNININCMDPLGRSALLIAIENENLEVMELLLNHGVYVGDALLYAIRKEVVGAVELLLS
HRRPSGEKQVPSLMMDSQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCD
CVECVSSSEVDSLRHSRSRLNIYKTLASPSLIALSSEDPILTSFRLGWELKELSKVENEF
KQEYEELSQQCKRFAKDLLDQARSSRELEIILNHRDDHSDELDPQECHDLAKLKLAIKYH
QKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVMCFIIGLLFPVFSLVYLLAPKSSLG
LFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTNLHMQGPPPTVVEWMILPWVLGFIWA
EIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYIKYNSSRPREEWEMWHPTLI
AEALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQ
LYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFT
EFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTL
PPPFNIIPSPKSVWYLLVWLHRKLCRKGPPQADDQRKHENLKEFTERHADNLIQNQHYQE
VIRNLVKRYVAAMIRSAKTNEGLTEENFKELKQDISSFRYEVLDLLGNRKPPRRTYSSSS
EATLKDEANENEDGRRGPSGDGADGDGDGDGGKAKSVSFSLSSAERRSQESAFSVSALFK
SMSGMDIAAEEKPKSNGLKKSSSSCSSSSSSSAFRNGSRLQRLSSSKKDSIKRLGLLFSR
MNGHVPEAREQPMYSISDGLLRPPSTWQDLKFSSEQQVTRSEVNLSQLGVGQSQPGAPQP
QRANGRDSLTLRTPGCAPASLRCSSGFAASSSRLLDSSEDVFEGWVGPCDRLDSSPWGAD
QEDSVTTKL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaatccaatggcgcagctctactacaagaaggtgaactactcgccgtaccgcgaccgc
atcccgctgcagattgtgagggcggaagcggagctttcgcccgaggagaaggcctacctg
acggcggtggagaaaggagactatgccggggtcaagcatgccctgcaggaggcagagatc
tactacaacatcaacatcaactgcatggacccgctggggcgcagcgcgctgctcatcgcc
atcgagaacgagaacctggaggttatggagctcctgctcaaccatggcgtctacgtggga
gacgcgctcctctatgccatccgcaaggaggtggtgggggccgtggagctgctcctgtcc
caccgccggcccagcggggagaagcaggtcccttcactgatgatggacagccagttctcg
gagttcacgcccgacatcacacccatcatgctggcggcccacaccaacaactacgagatc
atcaagcttctggtgcagcgcaaggtgaccattccacggccgcaccagatccgctgcgac
tgcgtcgagtgcgtctccagctccgaggtggacagcctgcgtcactcccgctctcgcctc
aacatctacaaaacactggccagcccctcgctcatcgctctctccagcgaggaccccatc
ctcacatccttccgcttgggctgggagctgaaggagctcagcaaggtggagaacgagttc
aagcaggagtacgaggagctgtcgcagcagtgcaagcgcttcgccaaggacctcctggac
caggcgcgcagctcccgcgagctggagatcatcctcaaccaccgcgatgaccacagcgat
gaacttgacccacaggaatgccacgacctggccaagctcaagctggccatcaaataccac
cagaaggagttcgtggcccagcccaactgccagcagctcctggccaccttgtggtacgat
ggtttccccggctggcggcggcgccactgggccgtcaagctggtcatgtgcttcatcatc
ggcctgctcttccccgtcttctcgctggtctacctgttagcccccaagagctcgctgggc
ctcttcattaagaagcccttcatcaagttcatctgccacacggcctcgtacctgaccttc
ctcttcctcctgctgctggcttcccagcacatcgtgcgcaccaacctgcacatgcagggt
ccgccgcccactgtggtcgagtggatgatcctgccctgggtgctaggcttcatctgggcg
gaaattaaagaaatgtgggacggaggcttcacggagtacgtgcacgactggtggaacctg
atggactttgccatgaactcgctgtacctggccacgatttccctcaaaattgtggcgtac
ataaagtacaacagctcgcggccgcgagaagagtgggaaatgtggcacccgactttgatc
gccgaggccctcttcgccatcgccaacatcttcagctcgctgcggctcatctcgcttttc
acagccaactcgcacctgggccctctgcagatctcgctgggccgcatgctgctcgacatc
ctcaagtttctcttcatctactgcttggtgttgctggcgttcgccaacggcctcaaccag
ctctacttctattatgagacgaaggcctccgacgagcccaacaactgcaagggcatccgc
tgcgagaagcagaacaacgcattctccacgctgttcgagacactgcagtctttgttctgg
tcggtgtttggcctgctcaacctgtacgtgaccaatgtgaaggcgcgccacgagttcaca
gaatttgtaggggccactatgtttgggacctacaacgtcatctccttggtggtgctgctc
aacatgctcattgccatgatgaacaactcctaccagctcatcgctgaccacgccgacatc
gagtggaagttcgcccgcaccaagctgtggatgagctactttgatgagggcggcaccctc
cccccgcccttcaacatcatccccagccccaagtcggtgtggtacctgctcgtgtggctc
cacaggaagctgtgcaggaagggccccccgcaggccgatgaccagaggaagcacgagaac
ctgaaggagttcacggagcgccacgctgacaacctcatccagaaccagcattaccaggag
gtgatccgaaacctggtgaagagatacgtggctgccatgatccgcagcgccaagacaaat
gagggtctgacagaggagaacttcaaggaactgaaacaggacatctctagcttccgctac
gaggtcctcgacctgctggggaacaggaagccgccaaggagaacgtactcctccagcagc
gaggccaccctgaaggacgaggccaacgaaaacgaggacggacggagagggccgtcgggc
gacggagcagacggagacggagacggagacggaggcaaagcgaagagcgtgtccttcagc
ctgtcgtcggcggagcggaggagccaggaatcggcgttcagcgtctctgccctcttcaag
tccatgtcagggatggacatagcggcagaggagaaaccaaagagcaacgggctgaagaag
tcttcctcctcctgctcgtcctcctcctcctcctccgcgttccgcaacgggagccgcctg
cagcgcctctccagctccaagaaagactccatcaagcgactgggcctgcttttctcccgc
atgaacggtcacgtcccggaagcccgggagcagcccatgtacagcatctcggacggcctg
ctgcggccgcccagcacctggcaggacctcaagttcagctctgagcagcaggtgacgcgc
agcgaggtcaacctgagccagctgggcgtggggcagagccagccgggtgctccccagcca
cagcgggccaacgggcgggacagcttgacgcttcggacccctggctgcgcccccgcctcc
ttgcgctgttcttccggcttcgctgcctccagctcccgactgctggactccagcgaggat
gtgtttgagggctgggtggggccctgcgataggttggactcctccccttggggggcagac
caggaagactcggtgacgacaaagctgtag
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integrated database retrieval system
