Scleropages formosus (Asian bonytongue): 108938054
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Entry
108938054 CDS
T04919
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm00310
Lysine degradation
sfm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
108938054 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfm03000
]
108938054 (prdm6)
03036 Chromosome and associated proteins [BR:
sfm03036
]
108938054 (prdm6)
Enzymes [BR:
sfm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
108938054 (prdm6)
Transcription factors [BR:
sfm03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
108938054 (prdm6)
Chromosome and associated proteins [BR:
sfm03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
108938054 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
108938054
NCBI-ProteinID:
XP_029115421
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All DBs
Position
17:complement(17088270..17141352)
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AA seq
580 aa
AA seq
DB search
MLKPGEPGGSAFLKVDPAYLQHWQQLFPQSQLKNGALGQLQPVERTTAVVPVESLRARPS
LISSTTTSSSSSSSSSTSASSSSSSSSSVSLAGLAQLPVPQIALFGQTLCGDLPSSANPN
PQPPPQPPQPKDVCLASSCKNDRGSRFRFTSEELDYYLYGQQRMEIIPLNNHSGDPNNRC
DMCADNRNGECPMHGPLHSLRRLVGTSSSSAAVPLPEVPEGLRDLPREVCLCTSTVPGLG
YGICAAQRIPQGTWIGPFQGVPLLLDKVQAGGPRNTRHLWEIYDQEGTLQHFVDGNEPTK
SSWMRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCL
AQDENLNVPASVMEAMSKQDGLHPFGKTGKLLASSSVPLRSMVFPHSPCARSFSLLDKPG
SADSGFGPLGAGKSQQRVLASPTSTSQLSTEFSDWHLWKCGQCFKTFTQRILLQMHVCTQ
NPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEK
PFKCERCDRSFTQATQLSRHQRMPNECKPISESGESIEVD
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaacccggagagcccggcggctccgccttcctcaaagtggaccccgcgtacctc
cagcactggcagcagctcttcccgcagagccagcttaagaacggggccctcgggcagcta
cagccggtcgagaggaccaccgccgtggtgcccgtggaaagcctgcgtgcgcgtcccagc
ctaatctcctctaccaccacctcctcctcctcctcatcctcctcttccacgtccgcctcc
tcctcctcctcctcctcctcctcagtgtccctggcgggtctcgcccagctccccgtcccg
cagatcgcactttttggacaaaccctgtgcggcgacctcccatcgtcggccaaccccaac
ccacagccccctcctcagcccccacagccaaaagacgtttgtttggcgtccagctgtaaa
aatgacagaggatcgaggttcagattcacttccgaggagttagactactacctgtacgga
cagcagaggatggagatcatccctttgaacaaccacagcggagaccccaataaccgctgc
gacatgtgtgcggacaaccggaacggggaatgcccgatgcacggccccctgcactccctg
cgtcggcttgtgggcaccagtagctcctcggctgctgttcctttgccagaggtgcctgaa
gggctgcgtgacctgccccgcgaggtgtgcctctgtaccagcactgttccaggcttgggt
tacggcatctgcgctgcccagcgcattccccaaggcacctggattggccccttccaagga
gtgcctctgctgctggacaaggtgcaggcaggggggcctaggaacactcggcacctgtgg
gagatctatgaccaggaggggacgttacagcactttgttgatggcaatgagccgaccaag
tccagctggatgaggtacatccgctgtgcgcgacactgtggggagcagaacatgatggtg
gtccagtacaggtcatgtatattctacagggcttgcatggacatcccaaggggcacagag
ctccttgtgtggtacaacgacagctacacctccttctttggcatccccctgcagtgccta
gcgcaggacgagaacttgaacgtcccagctagcgttatggaggccatgtccaaacaggat
ggcctgcatccctttgggaagacaggcaagctcttggcctcatcatctgtaccgctccgc
tccatggtgtttccccactcgccctgcgcacgcagcttctccctgctcgacaagccaggc
agcgcagactccgggttcgggcccttaggtgcgggaaaaagccagcagcgtgttctggct
agccccacctccaccagccaactaagcacagagttcagcgactggcacctgtggaagtgt
ggccaatgcttcaagaccttcacccaacggatcttgctacagatgcatgtgtgcacacag
aacccggacaggccataccagtgcggccactgctcccagtccttctcccagccgtctgag
ttgcgcaaccatgtggtcactcactccagtgaccggccctttaagtgtggctactgtgga
cgtgcgttcgctggcgccaccaccctgaacaaccacattcgcacacacactggggagaag
ccattcaagtgcgagaggtgcgacaggagcttcacgcaggccacgcagctgagcagacat
cagagaatgcccaacgagtgcaagcccatcagcgagagcggagaatcaatcgaggtggat
tag
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integrated database retrieval system
