Scleropages formosus (Asian bonytongue): 108939127
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Entry
108939127 CDS
T04919
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
108939127 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfm03400
]
108939127 (nthl1)
Enzymes [BR:
sfm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
108939127 (nthl1)
DNA repair and recombination proteins [BR:
sfm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
108939127 (nthl1)
Prokaryotic type
108939127 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
DUF498
Motif
Other DBs
NCBI-GeneID:
108939127
NCBI-ProteinID:
XP_018615781
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All DBs
Position
2:complement(22664504..22673032)
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AA seq
417 aa
AA seq
DB search
MSSPYFIGKSSASVLSRSARRGVRTRAVGSKGAELTKRGDLEKEAEDHAKGAVKQESEER
SIAEPDRRFQRTGGKQLLPVLEATGRSGSRTEGMRSCGAPPRRGHVKVQYEESDPKKERR
EPPDWRRQLDNIREMRSRRDAPVDHMGAEKCYDSHASPEVGRYHVLVSLMLSSQTKDHVT
AAAMRKLREHGLTVESVLRMDDDTLGKLIYPVGFWRTKVKYIKQTAAILQDEYGGDIPDS
FEGLVRLPGVGPKMAHLAMDIAWNRVSGIGVDTHVHRISNRLGWTRTQTKTPEDTRRELE
DWLPRELWSEINWLLVGFGQQVCLPLSPRCSECLNEHRCPSAHHSSPGKKLKLSPSKTPR
GKTRVWVDSPRPSHAIKVEKALPADPPTERRRTRASAAVAPRESTVGLSIKPDPDAP
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgccgtacttcatcgggaagagcagcgcgagtgtgctgagccggagcgcgcgc
agaggcgtccgcaccagggctgtgggttcgaagggcgccgaactcacaaagcgtggagac
ctcgagaaggaggcggaggatcatgcgaagggagcagtgaagcaggagagtgaggagcgc
agcatcgcagagccggatcggcgcttccagagaacgggtggaaaacagctgttgccagtg
ttggaagcgactgggaggtcaggcagcaggacggaggggatgcgaagctgcggggccccc
cccaggagaggtcacgtgaaggtgcagtatgaggagagcgatcccaaaaaggagcggcgg
gagcctcccgactggaggaggcagctggacaacatccgggagatgaggagccgcagagac
gcccccgttgaccacatgggagcggaaaagtgctacgactcccacgcttctcccgaggtg
ggacgctatcatgtgctagtttccctcatgctgtccagccagaccaaggaccacgtgacg
gcagcggccatgcggaagctcagggaacacgggctgacggtggagagcgtgctgaggatg
gacgacgacacgctggggaaactcatctacccagtgggcttttggaggaccaaggtgaag
tacatcaagcagaccgcggccatcctgcaagacgagtacggcggcgacattccagacagc
ttcgaggggcttgtacgcctcccgggggtcgggcccaaaatggctcacctggccatggac
atcgcctggaatcgcgtgtccggaatcggtgtggacacacatgtgcaccgcatctccaat
cggctgggctggacgaggacccagaccaagacccctgaagacacccggcgggagctggaa
gactggctgcccagggagctctggagtgagatcaactggctgctggtgggcttcggccag
caggtctgtctgccgctgagcccccggtgctccgagtgcctcaacgagcaccgctgcccg
tcagcccatcattcctccccgggcaaaaagctcaagctgagccctagcaagacccccaga
gggaagacgagggtttgggtggactctcctcggccttcgcacgccatcaaagtcgaaaag
gccctgcctgcagaccccccgactgaaagacggaggaccagagccagtgccgctgtcgcg
cctagagaaagcaccgtggggctctccattaagccagatcctgatgctccttga
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