Scleropages formosus (Asian bonytongue): 108941530
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Entry
108941530 CDS
T04919
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
sfm
Scleropages formosus (Asian bonytongue)
Pathway
sfm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sfm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108941530 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfm03041
]
108941530 (eftud2)
Spliceosome [BR:
sfm03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
108941530 (eftud2)
Complex C
U5 SnRNP specific factors
108941530 (eftud2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
108941530
NCBI-ProteinID:
XP_018619782
UniProt:
A0A8C9SL19
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Position
8:complement(30177596..30187024)
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AA seq
970 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDEDDDLEAEDREADEADEDEDEEPADADEDVPGMEVVLHED
KKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTRKFTLMEQELPHTVYEMEFLADL
MDSSELIRNVTLCGHLHHGKTCFVDCLIEQTHPDIRKRDEMDLRYTDILFTEQERGVGIK
STPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTAAIRISDGIVLFIDAAEGVMLNTERL
IKHAVQESLAITICINKIDRLILELKLPPTDAYYKLRHIVDEVNGMLSTYSTDESVVVSP
LLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYTEFAKRLWGDIYFNPKTRKFTKKAPN
SSSQRSFVEFILEPLYKILSQVVGDVDTSLPRVLDELGIHLTKEELKLNIRPLLRLVCNR
FFGEFTGFVDMCVQHIPSPQTGARNKIEHSYTGGLDSDLGEAMAECDPDGPLMCHTTKMY
STEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCAVGRLWISVARYQIEVN
RVPAGNWVLIEGCDQPIVKTATITEPRGNEEAQIFRPLKFNTASVIKIAVEPVNPSELPK
MLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVTF
CETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTKY
DWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCDE
PIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPADC
VSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVFH
HWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLELA
KQDVVLNYPM
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggatctctacgacgagtttgggaattacatcgggcccgagctggactcggac
gaggacgacgatctggaggcggaggatcgcgaggcggatgaggccgacgaggatgaagac
gaggagcctgcagacgctgatgaggatgtacccggcatggaggtggtgctgcacgaggac
aagaagtactaccccacagcagaggaagtgtatgggccggaggtggagaccattgtgcag
gaagaggacacgcaacccctcacagagcccattatcaagcccgtgaagaccaggaagttc
accctgatggagcaggaactgccgcacaccgtctacgagatggagttcttggcagacctg
atggacagttcggagctgattcgcaacgtcactctctgcggccacctgcaccacggcaag
acctgttttgtggattgcctgattgaacagacgcaccctgacatccgcaagagggacgag
atggacctccgctacacagacatcctcttcacagagcaggagcgcggtgtgggaatcaag
agcacccctgtcaccatggtactgcctgactccaggggcaaatcgtacctgtttaacatc
atggacacgccaggtcacgtgaacttctcggacgaagtgacagcggcgatccgcatctct
gacggcatcgtgcttttcatcgacgcagcagaaggagtgatgctaaacacagagcgcctg
atcaagcacgccgtacaggagagcctggccatcaccatctgtatcaacaaaatcgaccgg
ctcatcctggagctcaagctgccgcccacagacgcttactacaaactgcggcacattgtg
gacgaggtcaacggcatgctcagcacttactccacagatgagagcgtggtggtgtccccc
ctcctgggtaacgtctgctttgccagctctcagtacagcatctgctttaccctcggctcc
ttcgccaagatctactccgacacctacggggacatcaactacacagagtttgccaagcgg
ctttggggagacatttacttcaatcctaaaacgcggaagttcaccaagaaggcccccaac
agcagttcgcagcgcagctttgtcgagttcatcctggagccgctctacaagatcctgtcc
caggtggtgggggatgtggacacctcactgccacgtgtcctggacgagctgggcatccat
ctgaccaaggaggagctgaagctcaacatccggcctctcctccggctggtgtgcaaccgc
ttctttggcgaattcactggttttgtggacatgtgtgtgcagcatatcccatcaccgcag
acaggcgcccgcaataagattgagcacagctacaccggtggccttgactctgacctgggg
gaggccatggcggagtgtgaccctgatggtccactcatgtgccacaccaccaagatgtac
agcacggaggatggcgtgcagttccacgctttcggccgtgtgctgagcggcaccatccag
gccggccagcccgtcaaggtgctcggggagaactacacgctagaggatgaggaagactcg
caggtgtgcgctgtcggacgcctctggatctccgtggccaggtaccagatagaggtgaac
cgggttccagcaggaaactgggttctcatcgagggctgcgaccagccgatcgtcaaaaca
gccaccatcacagagccgcgtggcaacgaggaggcccagatcttcaggcccctcaagttc
aatacggcgtcggtgattaaaattgctgtcgagcccgtcaacccatctgagctccccaag
atgctggatggactgaggaaggtcaacaagagctacccctccctcacgaccaaggtcgag
gagtcgggggagcacgtcatccttggcacgggagagctgtacctggactgcgtcatgcat
gacttgcgcaagatgtactcggagattgatattaaggtggctgaccctgtcgtgaccttc
tgtgagacggttgtggagacctcctcccttaagtgcttcgctgagacacccaacaaaaag
aacaagatcaccatgattgctgaacccctggaaaaggggctggctgaggacattgagaat
gaggttgtgcagatcacctggaacagaaaaaagcttggagagttcttccagacaaagtat
gactgggatctgctggctgcccgttcgatctgggcttttggacccgacacgacaggaccc
aatattctcgtggacgacactctgccctctgaggtggacaaggcccttctgggctccgtg
aaggacagcatcgttcaaggtttccagtggggcaccagggagggaccgctgtgtgatgag
cccatccggaatgtcaagttcaagatcctggatgcggtcattgcccaggaaccactgcat
cgaggcggcggacaggtcattcccacagcccggagggtggtgtactccgccttcctcatg
gcaactcccaggctgatggagccctattactttgtggaggtgcaggcaccagctgactgc
gtgtctgccgtgtacaccgtgctggcccgcaggaggggtcacgtgacacaggacgccccc
atcccgggctcaccgctctacaccattaaggccttcatcccagccatcgactcctttggt
ttcgagaccgaccttcgcacacacacccagggccaggccttcgccctctccgtattccac
cactggcagatcgtacccggtgaccccctggacaagagcatcgtgatccgtcctctggag
ccacagcctgctcctcacttggcccgagagttcatgatcaagacccgtcggcgcaagggc
ctaagcgaggacgtcagcatcagcaagttcttcgacgatcctatgttgttggaactggcc
aagcaggacgtcgtgctcaactaccccatgtga
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