Scleropages formosus (Asian bonytongue): 108942315 Help Entry 108942315         CDS       T04919                                  Symbol traf6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism sfm  Scleropages formosus (Asian bonytongue) Pathway sfm04010   MAPK signaling pathway sfm04120   Ubiquitin mediated proteolysis sfm04140   Autophagy - animal sfm04144   Endocytosis sfm04620   Toll-like receptor signaling pathway sfm04621   NOD-like receptor signaling pathway sfm04622   RIG-I-like receptor signaling pathway sfm05132   Salmonella infection sfm05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:sfm00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     108942315 (traf6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     108942315 (traf6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     108942315 (traf6)    04140 Autophagy - animal     108942315 (traf6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     108942315 (traf6)    04621 NOD-like receptor signaling pathway     108942315 (traf6)    04622 RIG-I-like receptor signaling pathway     108942315 (traf6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     108942315 (traf6)   09171 Infectious disease: bacterial    05132 Salmonella infection     108942315 (traf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfm04131]     108942315 (traf6)    04121 Ubiquitin system [BR:sfm04121]     108942315 (traf6) Enzymes [BR:sfm01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      108942315 (traf6) Membrane trafficking [BR:sfm04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     108942315 (traf6) Ubiquitin system [BR:sfm04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     108942315 (traf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_3 zf-C3HC4_4 zf-RING_5 TRAF3_RING U-box RING_XB3-XBAT31 zf-TRAF_2 zf-RING_11 SlyX DM Sina_ZnF Cas12f1-like_TNB Motif Other DBs NCBI-GeneID:  108942315 NCBI-ProteinID:  XP_029107647 UniProt:  A0A0P7V9U0 LinkDB All DBs Position 5:complement(24674427..24680727) Genome browser AA seq 552 aa AA seqDB search MSQSCCETEKDGLEAACGSSELSACAASVEKERESCWSPSESPVTLGTSSSLQQSSSTGQ TDLQGYDVEFDPPLESKYECPICLMALRAAVQTPCGHRFCRGCIEKSLRDAGQKCPVDNE VLLEEQLFPDNFAKREILSLTVRCPNTGCNHKMELRHLEAHVVQCQFTTVQCPLCQNDVW KSQLEEHTSLHCPRRPVSCPDCMHPYVYEESKLHEQQCPLAYVVCNYCSMELIRDQLASH CDLDCLKAPVACPFSSFGCQERMPRNDLAQHMQEFTQMHMRHMADHLRNLTLGSGPFAPG ASCEERAGTTRAGPTSGPPCECGPSLQHMRETVHQLEGRLVRQDHQLRELSIHNDTQVAQ LAELRRQVRVLEERARELEAQQCQGIYVWRVEGFSAHLRNQEAGQPVVIHSPGFYTGRPG YKLCLRLHLQTPNAPRCSNYISLFVHTMQGDFDSQLSWPFQGIIRLAILDQVDNQHHVEV METKPDLLAFQRPTSPRNPKGFGYVTFMHLQALQQRQYVRDDTLLVRCEVTPRFDMCIRR EGFQPRGPEASL NT seq 1659 nt NT seq  +upstreamnt  +downstreamnt atgagccaatcctgctgtgagacggagaaggatggtctggaagctgcatgtggctcctct gaactgtcagcgtgtgcagcctctgtggagaaggagcgcgaatcctgctggagcccttcg gagagtccggtcaccttgggcacatcttccagcctccagcagagcagcagcacggggcag actgatctacaggggtatgatgtcgagtttgacccgcccctggagagcaagtatgagtgc cccatctgcttgatggctttacgggcagctgtgcagaccccctgcggtcaccgattctgt cgcggctgcattgagaagtcactccgggatgcaggacagaagtgtccagtggacaatgaa gtgctgttggaagagcaactcttccccgataactttgcgaagcgtgaaattttgtcactg actgtgcgctgccccaatactggctgcaaccacaagatggagctccggcacctggaggcc catgtggtgcagtgccagttcaccacggtgcagtgcccgctgtgccagaatgatgtgtgg aagagccaactagaggagcacacttccctgcactgcccgcgccgaccagtgtcctgtcct gattgcatgcatccctacgtgtacgaggagagcaagcttcacgaacagcagtgccccctt gcttacgtggtgtgcaactactgcagcatggagctgatccgagaccagttggcatcacac tgtgacttggactgtctcaaagctcctgttgcctgtccattcagctcctttggatgccag gagaggatgccacggaacgacctggcgcagcacatgcaagagttcacacagatgcacatg cgtcatatggcagaccatctgcgcaacctgacgctggggagcgggccgtttgcaccaggg gcatcgtgcgaggaacgggcaggcaccacgagagctgggcccacgtcaggccctccctgc gagtgtggcccaagcctgcagcacatgcgtgagacagtgcaccagctggagggtcgtctc gtgcggcaggaccaccagctgcgtgagctgagtattcacaatgacacgcaggtggcgcag ctggccgagctgcggcggcaggtgcgcgttctggaggagcgggcacgcgagctggaggcc cagcagtgccagggtatctatgtgtggcgggtagaaggcttctctgcccaccttcgcaac caggaggcaggccagcccgtggtcatacacagccctggtttctacacggggcggccgggc tacaagctctgcctccggctgcacctgcagacgcccaatgccccacgctgctccaactac atctccctgttcgtgcacaccatgcagggtgacttcgacagccagctgtcctggcccttc cagggtatcatccggctggcgatcctggaccaagtggacaaccagcaccacgtggaagtg atggaaaccaagccagatctgttggcattccagcggcccacatccccacgcaaccccaag ggctttggctatgtcaccttcatgcacctgcaggcccttcagcagcggcagtatgtgcgg gacgacaccctactggtacgctgcgaggtcaccccccgattcgacatgtgcatccgcaga gagggctttcagccccgcgggccggaggcttccctctaa

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