Shigella flexneri 2003036: SFy_1098
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Entry
SFy_1098 CDS
T03267
Name
(GenBank) 23S rRNA -methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sfn
Shigella flexneri 2003036
Brite
KEGG Orthology (KO) [BR:
sfn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sfn03009
]
SFy_1098
Enzymes [BR:
sfn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
SFy_1098
Ribosome biogenesis [BR:
sfn03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SFy_1098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
AIL34801
LinkDB
All DBs
Position
823453..824580
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AA seq
375 aa
AA seq
DB search
MQCALYDAGRCRSCQWITQPIPEQLSAKTADLKNLLADFPVEEWCAPVSGPEQGFRNKAK
MVVSGSVEKTLLGMLHRDGTPEDLCDCPLYPASFAPVFAALKPFIARAGLTPYNVARKRG
ELKYILLTESQSDGGMMLRFVLRSDTKLAQLRKALPWLHEQLPQLKVITVNIQPVHMAIM
EGETEIYLTEQQALAERFNDVPLWIRPQSFFQTNPAVASQLYATARDWVRQLPVKHMWDL
FCGVGGFGLHCATPDMQLTGIEIAPEAIACAKQSAAELGLTRLQFQALDSTQFATAQGEV
PELVLVNPPRRGIGKPLCDYLSTMAPRFIIYSSCNAQTMAKDIRELPGYRIERVQLFDMF
PHTAHYEVLTLLVKQ
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactttacgacgcgggtcgctgtcgttcctgtcagtggataacgcagccg
attccagagcaactctccgctaaaaccgccgatcttaaaaatctgctcgccgattttccg
gttgaggaatggtgcgcgccggtgtcaggcccggaacaagggtttcgtaataaagccaaa
atggtggtgagtggtagcgttgaaaaaacactgctcggtatgctgcatcgcgatggcacg
ccggaagacctttgtgactgcccgctttatccagcctcatttgcgcccgtttttgcggcg
ctaaaaccgtttatcgcccgagcggggttaacgccctacaacgtggcgcgtaagcgtggc
gaactgaaatacattctgctgactgaaagccagagtgatggcggcatgatgctgcgcttt
gtactgcgttctgataccaagctggcgcaactgcgtaaggcgctgccgtggttacacgaa
caactaccgcagctgaaagttattaccgtcaatattcagccggtacatatggcgattatg
gaaggggagacggagatctacctgaccgaacaacaggcactggcggagcgttttaatgac
gtaccgctgtggatccgtccgcaaagtttcttccagactaatccggcggtcgccagccag
ttgtacgccaccgcgcgcgactgggtacgacagctgccggttaaacatatgtgggatctg
ttctgcggtgtggggggctttggtttacactgcgcgacgcctgacatgcagttaaccggg
atcgaaattgcgccagaggccattgcctgtgcaaagcagtcagccgctgaactgggctta
actcgtttacaatttcaggcgctggactccactcagtttgccactgctcagggggaggtg
ccggagctggtgctggttaacccgccgcgccgcggcattggtaaaccgctgtgtgattat
ctttcaacgatggcaccgcgttttattatctactccagctgtaacgcccaaaccatggcg
aaagatatccgcgaactgccaggttaccgcatcgaacgggtacagctttttgatatgttc
ccgcacaccgcgcactatgaagtgttgacgctgctggtgaagcaataa
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