Salvelinus fontinalis (brook trout): 129812855 Help Entry 129812855         CDS       T11136                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon04115   p53 signaling pathway sfon04145   Phagosome sfon04148   Efferocytosis sfon04350   TGF-beta signaling pathway sfon04510   Focal adhesion sfon04512   ECM-receptor interaction sfon04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sfon00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     129812855   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129812855  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     129812855    04148 Efferocytosis     129812855   09143 Cell growth and death    04115 p53 signaling pathway     129812855   09144 Cellular community - eukaryotes    04510 Focal adhesion     129812855   09142 Cell motility    04820 Cytoskeleton in muscle cells     129812855  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfon04131]     129812855   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfon00536]     129812855 Membrane trafficking [BR:sfon04131]  Endocytosis   Phagocytosis    Opsonins     129812855 Glycosaminoglycan binding proteins [BR:sfon00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129812855 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 TSP1_ADAMTS cEGF Laminin_G_3 TSP1_CCN EGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  129812855 NCBI-ProteinID:  XP_055720760 LinkDB All DBs Position 16:25271364..25283698 Genome browser AA seq 1172 aa AA seqDB search MKLTGVFLLLVLWNCEGSRVAESRDDNSVYDLFELVKVNKRHQGVTLVKGADPYSPAYKI LNADLIPPVPEISFRDLIDSIQAERGFLLLVNFKQFKKTRGSLLTVEKDDGSGPIFEIIS NGKAQTLDVVYSTGNKQQVVSIEDADLATGHWKNITLFIQEDRAQLFVGCEEINISEMDV PIQKVLTHEVADIARLRIGKGAVKDRFMGVLQNVRFVFGTTLEAILRNKGCQNSATLTDV MTLDNPVNGSSPAIRSDYTGHKTKDIQQVCGFSCEDITSMFKELKGLGVIVKQLSNELNR VNKESTLLMNQMNIHSGICLHNGIVHKDKEEWTVDDCTECTCQNSATVCRKISCPLMPCA NATVPDGECCPRCGNPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINSNCEGTSV QTRDCYPQECDKRFKQDGGWSHWSPWSSCSVTCGEGVITRIRLCNSPTPQMGGRDCQGQG RETEVCQESPCPINGGWGPWSLWDTCSVTCGGGLQSRQRLCNNPAPKYKGKECQGDTKTS QLCGKEDCPINGCLSNPCFAGAKCTSFDDGSWKCGSCPVGYTGDGINCKDIDECKEVPDA CFTLNGVHRCENTEPGYNCLACPTRYSGPQPYGRGVEQATAKKQVCTPRNPCQDGSHDCN KNANCIYLGQFSDTMFRCECKPGYAGNGHICGDDTDLDGWPNKDLLCVENATYHCKKDNC PNLPNSGQEDHDKDGLGDACDHDDDNDGIPDDRDNCPMVYNPAQYDVDTDDVGDRCDNCV HESNPDQVDTDNNGEGDACAIDIDGDGILNERDNCPYVYNVDQRDTDGDGVGDHCDNCPL EHNPDQIDSDSDRVGDKCDNNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDDKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNILDIYDVCPENFAISETDFR RFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNAVDFSGTFFINTDR DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSHTPTRAQGYSGVSIKVVNSTTGPGEHLRN ALWHTGDTAGQVRTLWHDPKNIGWKDYTAYRWHLVHRPKSGLIRVVMYEGKRIMADSGNI YDKTYAGGRLGMYVFSQEMTYFSDLKYECRDS NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagctgacaggagtctttctccttttggtgctttggaattgcgagggcagcagggtg gcagagagtagagatgataacagtgtatacgacctattcgagcttgtgaaagtgaacaaa aggcaccaaggagttaccttggtaaaaggcgcagatccttacagcccagcctataagata ctgaacgcagacctgatccccccggttcccgagatctccttcagggacctcattgattcg atacaagctgagaggggattccttctcctggtcaacttcaagcagttcaagaaaaccagg ggcagtctattgactgtggagaaggatgacggatcaggaccgatattcgaaatcatttct aatggcaaggcgcaaactctggatgtggtatactctaccgggaacaagcaacaggtagtg tccatagaagatgcggatctagcgactggacactggaagaatatcacgctgttcattcag gaggatcgtgcccagctgttcgtcgggtgtgaagagatcaatatatcagaaatggatgtg cccatccaaaaggtcctgacgcatgaggttgccgacattgcccgtctgaggatcggaaaa ggagctgtgaaagatagatttatgggagtgcttcagaacgtgcgcttcgtttttggaacc actttggaggcgattttacgcaataagggatgccaaaactctgcaactttgactgatgtc atgacactggacaacccagtaaatgggtccagcccagcaataaggtctgattacactggc cacaaaaccaaagatattcagcaagtctgtggtttttcctgtgaggatatcaccagcatg ttcaaggagctcaagggccttggtgtgattgttaagcagctgtcaaatgagctcaacaga gtgaataaggagagcactctgctcatgaaccagatgaacatccacagtgggatctgtctt cacaacggcattgtgcacaaggacaaagaagagtggactgtggacgactgcacagagtgt acctgccagaactctgccactgtgtgtcgcaaaatctcttgccccctgatgccctgtgcc aacgccaccgtgcctgatggagagtgctgcccacgttgtggaaacccgagtgactatgct gaggatggctggtccccctggtctgaatggacccattgttctgtgtcttgtggacggggt atccagcagcgaggtcgctcctgcgaccgcatcaacagcaactgcgaaggcacttctgtg cagacccgcgactgctaccctcaggaatgtgacaagcgctttaagcaggatggtggctgg agccactggtctccctggtcctcctgctctgtgacctgtggtgagggagtcatcacccga atccgcctctgcaactcccccactccccagatgggaggcagagactgtcaaggacagggc cgagagacagaagtctgccaggaatcaccttgtccaattaacggaggctggggaccctgg tctctgtgggacacctgttctgtcacctgtggaggtggactccagtctcgccagcgtctc tgtaacaaccccgcccccaagtacaaagggaaggaatgtcagggtgacaccaaaacatcc caattgtgtggcaaagaggactgccctatcaatggctgtctgtccaacccgtgctttgct ggagctaagtgtaccagctttgatgatggttcctggaagtgtggctcatgcccagtgggc tacaccggagacggcatcaactgcaaggacatcgacgagtgcaaggaggtccctgatgcg tgcttcacactcaacggagtccaccgctgtgagaacactgagcctggctacaactgcctt gcctgccccactcgctactcaggaccacagccctatgggaggggagtggagcaggccaca gccaagaaacaggtgtgcacaccccgtaacccctgccaagacggcagccatgattgcaac aagaatgctaactgtatctacctgggtcagttcagcgacaccatgttccgctgtgagtgc aaacctggttacgctggcaatggccacatctgtggagatgacaccgacctggatggatgg ccaaacaaagacctcctgtgtgtggagaacgccacctaccactgcaagaaagacaactgt ccaaaccttcccaactctgggcaggaggaccatgacaaagatgggcttggtgacgcttgc gatcacgatgatgacaacgacgggatccctgatgatagggacaactgcccaatggtctac aacccagctcagtatgatgtggacacagatgacgttggtgatcgctgtgataactgtgtg catgagagcaaccctgaccaagtcgacacagacaacaacggagagggagatgcctgtgct attgacattgacggtgatggtattctaaatgagagggacaactgcccctatgtctacaat gtggaccagagagacactgacggggacggagtgggagaccactgtgacaactgccctctt gagcacaacccagaccagattgactctgactcagatcgtgtgggagacaagtgcgacaac aaccaggatattgatgaggacggtcatcagaacaacttggacaactgtccctatatcccc aacgccaaccaggccgaccacgacaaagacggcaagggtgacgcctgcgaccacgatgac gacaacgacggtatccctgatgacaaggacaactgcaggctggcctttaaccctgaccag ctggactctgatggtgatggtcgtggagatgtttgcaaagatgactttgaccaagacaac atacttgatatctacgatgtgtgccctgagaactttgccatcagcgagacggacttccgc agattccagatggtaccgctggaccccaagggaacctcccagatcgaccccaactgggtg gtccgtcaccagggcaaagaactggtgcagactgtcaactgtgaccctggcatcgctgtt gggttcgatgagtttaacgcagtggacttcagtggaacgttcttcatcaacacagacagg gatgatgactacgctggctttgtgtttggctaccagtccagctccaggttctatgtggtg atgtggaagcagatcacacagacctactggtcccacaccccaaccagagctcagggctac tctggagtgtccatcaaagtagtcaactccaccacaggacctggggagcatctgaggaac gccctttggcacaccggtgacactgctggacaggtacgtactctgtggcacgaccccaag aacattggctggaaagactacaccgcctacagatggcacctggtccacaggcccaagtct ggactcatcagagttgtgatgtatgaaggcaagagaatcatggcggattctggaaatatc tacgacaagacttatgctggtggcagactaggcatgtatgtcttctctcaggagatgaca tacttctcagacctcaaatacgaatgcagagattcttaa

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