Salvelinus fontinalis (brook trout): 129813008
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Entry
129813008 CDS
T11136
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129813008 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129813008 (c9orf72)
Membrane trafficking [BR:
sfon04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
129813008 (c9orf72)
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
129813008
NCBI-ProteinID:
XP_055721089
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Position
16:complement(31072982..31138955)
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AA seq
518 aa
AA seq
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MKGRLEGTQRIERALRGCVCLCVRLRVSVSLAACPICELIWNMDFEMRSSTLRYSNNMSS
GPPQSPAVAKTEVTVEGECPLLAATFAYWDNILGPRVRHIWAPRCEQPLLLSDGEVTFLA
NHTLNGEILRSAECGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQTELAF
YLPLHTVCVERLKHIIRKGRIWMQKGYNIISVLTSEIVPIMELLSSMKTHSVPEDIDIKD
TILNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPDKVNKIVRTLSLFLTPAERKCS
RLCKADSSFKYDTGLFVQGLLKDSTGSFVLPFRQVLYSPYPTTHIDVDINTVKQMPPCHE
HTYNQRLYMRSELSTLWKAASEDDIAPDAVIHTDESFTPNLNIFQDVMHKDTLVKLFIDE
VFMLKPGLNLRSTYLAQFLLILHRKALTLLKYIEDETQKGKKPFRSLRSLKTDLDLMVEG
DLNIVMAFAEKLRAGLHSFVFGKPFYTSVQERDVLMSF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcagattggaagggacacagaggattgagcgggcactccgaggctgtgtgtgt
ttgtgcgttagattgcgtgtaagtgtcagcttggctgcatgccccatctgtgagctaatc
tggaatatggattttgaaatgaggagcagcactttaaggtacagtaacaacatgtcttct
ggcccacctcagtcgcccgcagtggctaagacagaggtgactgtcgaaggagaatgccct
ctcctcgccgccacctttgcctactgggacaacatcctgggcccacgggtgcgccacatc
tgggctcccaggtgtgagcagccgctgttgctgagtgacggtgaagtcaccttcctggcc
aatcacacgctgaacggggagattctgcgcagtgccgagtgtggagcggtggacgtcaag
ttctttgtcctagctgagaagggtgtcatcattgtctcgctgatctttgacggcgagctg
aagggtgacaagaacacgtgtgccctgtccattattcttccacagacagagctggccttc
tacctgcccctgcacactgtctgtgtggagaggctcaaacacataatccgcaagggacgc
atctggatgcagaaaggctacaacataatttctgtgctgacatcagagattgtccccatc
atggagctgctgtcctccatgaagacacacagtgtcccagaggacatagacatcaaggac
accatcctaaatgatgacgacattggagacagctgccatgaagatttcctgcataaggca
atcagttctcatctccaaacgtgtggctgctccatggtggtcggaagcaacccagacaaa
gtcaacaagatagtgcgaacactgagccttttcctcacccctgctgagaggaagtgctct
cggctctgtaaagctgactcctctttcaagtacgacacaggactgtttgtacaaggcctc
ctcaaggactccactggcagcttcgtcttgcccttccgccaggtgctgtactcgccctac
ccgaccacgcacatcgacgtggacatcaacacggtgaagcagatgccaccctgccatgag
cacacgtacaaccagcgcctctacatgcgctcggagctcagcacgctctggaaggcggcc
agcgaggatgacatcgcccccgacgctgtcattcacaccgatgagtccttcacccccaac
ctaaatatttttcaggacgttatgcataaagacactctggtgaagttatttatagatgag
gtgttcatgctgaagccaggcctcaatctgcgaagtacttacttagcccagttcttgctg
atccttcacaggaaggctctcacgctactcaaatacattgaagatgaaacgcaaaaggga
aagaagcctttccgctccttgcgcagcttgaagacagacctcgacctgatggtggaaggt
gacctgaatattgtcatggcttttgctgagaagctgagggctggactgcactcctttgta
tttgggaagccattctacaccagtgtacaggagcgagatgtgctcatgagtttttga
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