Salvelinus fontinalis (brook trout): 129813105
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Entry
129813105 CDS
T11136
Name
(RefSeq) LOW QUALITY PROTEIN: tectonin beta-propeller repeat-containing protein 2-like
KO
K23881
tectonin beta-propeller repeat-containing protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129813105
Membrane trafficking [BR:
sfon04131
]
Autophagy
Other autophagy associated proteins
Others
129813105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_HPS5
Hyd_WA
Tectonin
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Enterotoxin_b
WD40_WDHD1_1st
Beta-prop_RSE1_2nd
Beta-prop_WDR75_1st
Beta-prop_VPS8
WDR55
Beta-prop_WDR19_1st
WD40_like
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
129813105
NCBI-ProteinID:
XP_055721264
LinkDB
All DBs
Position
16:36788433..36830737
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AA seq
1379 aa
AA seq
DB search
MAAPTPPQSTLREFCPLYYLLNAIPAKVQKGFRSVVVYLTALDTNRDYIAVGSSNGMLYL
YCRRVSQINKYSIEGKSEAITAVKLLSCFDDLVAVGTAFGRVAVFQLVSQLPGRNKQLRR
FDVVGLHKSTVTALAWSANGMKLFSGDVKGKVVYSTVDLDQGVCNPVLLVEEXSAIVHLE
YSQKVLLISSYQRSLLFYTQEQTLQQLVTKPRKSNGKFGACFQPGLCKQSDLLVYAARPG
LRLWRTDVRGLVVDTLVLKRLFNQEVPQFELFTRPGPTGGCRPHERQLGVVSCFLREGWV
LSWNEYSVYVLDCLNQVIIGALESCGDIVSVSCTENDXLLKGDRDIVRISNAPEDLASNI
SELSFRLTSPLTTPTILLPPSGSVXTVQPIRTMAITEQGERERLVDEEVEEVLEQDQLSN
ILEAGKAGALMERPELGERLDHQRGGSVGGTSDFHSRSSSITSCDRVQGMMLSTSTMEQS
ELSSSQYSAINQEDFQHELVVQAIKVKKNAKRRRQESGNRIGEQHNSWSESIYSQDGGGG
SDGGTSTSISEPPSASDHTSFPCSSLDLQSRSSGSPDQEGSISRASPELTASGAQSQGGD
QREDPLTQTQPPGTQPPSCPMSLPSQDMECQSYPKNENRPSITNKEGEAPTRHVDLLLEC
TFAYMQTSKEQDPMEEQEDDLLSPLIGLDDLDQDDPHHQHCQLDLEPPSCVDQMCYSLEP
EQCHSSDEEDIYAVHGVPYSASSASLGNRLNALNLQGSNIGQQDQDKTLAESWMGYTGPG
CGILNLVVTDQYIWCLDFKGGLYCSALPDRGLSWQKFEDNVQQVALSPSGSLLWKVEQKT
MTAYACGKVTIKGKKHWYMALEDSAFVALGEDTAWIIRTSGDLYLQTGLSVDRPCARAVK
VNCPCPMAQIAARGGVVWALSQHRAVFYRDSDGLSSYCSEGEMWKYDKISESQGLEPICI
ALGESNTAWALDTSGSLWFRTGVTARKPQGEDDHWWQVSITDYVVFDQGSLFQTLIQATQ
NMATATKAVERVAECLRMAFLSQQFQCQPSLVSSNTSGVWIASGRNNFXKGSLSGTFWQG
VVPRGTVSATKWAFVYSSAVLTKEGSFLWLGQSRKDLFCVWDQDGQMHLTTVQLPQDTEM
VQLSACRDALWGLDQHGRVHIRTLSTSCPTGMHWNLLDLSQLDQVRLVSVSCGSQNVWAC
DGYGMVYFRVGTQPLNPSMMLPAWICIEPPEQPLGVHFIRIHTSPNDRMLWAMDNRGNVH
ARTGITDKMPIGTDWEHIPGLQANQLVLSVKTVWVRCPNREVARRYGITDKNPAGDYWKK
IPGLLNWLTVTPMDELWAVSVSGGLRHRLTETLVHNTINSHVNTGSLSREDLEEEWEVI
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccaactcctccacagagcaccctgagggagttctgtcccctatactacttg
cttaatgcaatacctgccaaggtccagaaaggcttccgctctgtagtggtctacctgact
gctctggacaccaacagagattacattgctgtggggagcagtaatgggatgctctatctg
tactgcaggcgggtcagccagattaataaatacagcatagaggggaaatccgaagctatc
acagcggtgaagctgctcagttgttttgatgacttggtggcagtgggcacggcgtttggt
cgggttgctgtctttcaactggtgtctcaacttccaggcaggaacaaacagctaaggcga
tttgatgtggttggtttgcacaaaagcacagtcactgccttggcctggagtgctaatgga
atgaagctcttctctggtgatgtcaaaggaaaggttgtgtactctactgtggacctggat
cagggtgtgtgtaacccagtgctgctggttgaggagncttcagccatagtccacctggag
tatagtcagaaggtcctgctcatctcctcttatcagagatccctgctgttctacacccag
gaacagaccctgcagcagctggtcaccaagcctaggaagagcaatgggaagtttggtgcg
tgcttccagccaggcctgtgtaagcagagtgacctgctagtctatgcagcgaggcctggc
ctccggctgtggcggacggatgtaagagggcttgtggtggacacgctggtcctcaagcgt
ctgttcaaccaggaggtgccacagtttgagctgttcaccaggccgggccccacggggggt
tgccggccccacgagaggcagctgggtgtggtgagctgcttcctcagagagggctgggtc
ctcagctggaatgaatatagtgtctacgtgttggactgcctcaaccaggtgatcatcggt
gcactggagagctgtggggacatcgtctctgtatcatgcaccgaaaatgatnngctcctg
aaaggagatcgggacattgttcgcatctcgaatgctcctgaggacttggcttccaacatt
tctgagttgtccttccgtctgacctctcccctgaccactcctaccatcctgcttcctccc
tccggctccgtgtagacagtccagcctatcaggacaatggccatcacagagcagggggag
cgggagaggctggtggatgaggaggtagaggaggtgctggagcaggaccagctgagtaac
atcctcgaggcggggaaggccggagccctgatggagaggcctgagttgggggagcgactg
gaccaccagagaggaggcagtgtagggggcaccagtgattttcatagccgcagcagttcc
atcacgtcctgcgacagagttcagggcatgatgctctccaccagcaccatggagcagtca
gagctctcctccagccaatacagtgccatcaaccaggaggactttcagcatgagctagtg
gtccaggccatcaaagtcaagaagaatgccaagaggaggaggcaagaaagtggaaaccgc
atcggtgagcagcacaacagctggtccgagagcatttacagtcaggatggaggagggggc
agcgacggggggaccagcacctctatcagtgagcccccctcagcttctgaccacacaagt
ttcccgtgcagcagtctggacctacagagcaggagcagcggatcccccgaccaggagggc
tccatcagtagggcctctccagaactcactgcctctggagctcagagccagggtggtgac
cagagagaggaccctctgactcagactcaaccccctgggactcagcctccctcctgcccc
atgtccctgccctcccaggacatggagtgccagtcctacccaaagaatgaaaacagaccc
tccatcactaacaaagagggggaggctcccacccgacacgtagacctattactggagtgc
acctttgcctacatgcagacctcgaaggagcaagaccccatggaggagcaggaggatgat
ctcctgagccccctcattgggctggatgacttggaccaggacgacccccaccaccagcac
tgtcaactggatctggagcctcctagctgtgttgatcagatgtgttattccctggagcct
gagcagtgccactctagtgacgaggaggacatttacgctgtccacggagttccgtactca
gcctccagcgccagcctgggaaacagactcaacgccctcaacctccaggggtccaacatc
gggcagcaggaccaagacaagacattggcagagagctggatgggctacacagggccaggc
tgtggcatcctcaacctggttgtgactgaccaatacatctggtgcctggactttaaagga
ggcctgtactgcagtgccctcccagacaggggcctgagctggcagaagtttgaggacaat
gtgcagcaggtggcactgtcaccttcagggtccctgctatggaaggtggaacagaagacc
atgacagcgtatgcatgtggtaaagtcaccatcaaaggaaagaagcactggtacatggcc
ctggaggattctgcctttgtggcacttggtgaagacacagcatggatcatccgaaccagc
ggggacctctacctgcagacaggtttgagtgtggaccgtccgtgtgcacgagctgtgaag
gtgaactgcccgtgtcctatggcccagatcgcagcgcgtggcggggtggtgtgggccctc
agccaacacagggccgtcttctacagagatagcgatggcctcagcagctactgctctgag
ggggaaatgtggaagtatgacaaaatcagtgagagtcagggtctggagcccatctgtata
gccctgggagagagcaacacggcttgggctctggataccagcggcagtctgtggtttagg
actggagtcactgccaggaagccccaaggggaagatgaccactggtggcaggtgagcatc
acagactatgtggtgtttgatcagggcagtctgttccagactctgatccaggccactcag
aacatggccacagccaccaaggctgtggagcgggttgcagagtgcctccgcatggccttc
ctgtcccagcagttccaatgccagcccagcctggtctcctccaacaccagcggcgtctgg
attgcatccggcaggaacaacttcnncaagggcagcctcagcggtacgttttggcagggt
gtggtacccagaggaaccgtctcagccaccaagtgggcattcgtctattcctcggctgta
ctcactaaagaagggagcttcctgtggctgggccagagcaggaaagacctgttctgtgtt
tgggaccaggatggtcagatgcacctcaccacagtccaactgccccaggacacagagatg
gtccagctctctgcctgccgcgatgccctgtggggactggaccaacacggccgcgtccac
atccgcaccctctccactagctgccccaccggcatgcactggaacctactggacctcagc
cagctcgatcaggtaaggctggtcagcgtatcttgtggcagccagaacgtgtgggcgtgt
gatggctatgggatggtctatttccgcgtcggtacgcaacccctcaaccccagcatgatg
cttcctgcctggatctgtatcgaaccaccagagcagccactaggagtgcattttattaga
atccacaccagtcccaacgacagaatgctgtgggccatggacaacagagggaacgtacat
gcccgcacgggaatcacagacaagatgcctatcggcacagactgggaacacattccaggc
ctgcaggccaatcagctggtgctgagtgtgaagactgtttgggtgcgctgccccaacagg
gaggtggcgaggcgctatggtatcactgacaagaacccagcaggggactactggaagaag
ataccaggcctgctcaactggctgacagtgacacccatggacgagctgtgggctgtgagt
gtttctggaggtctgaggcaccggctcaccgagaccctggtgcacaacaccatcaattcc
catgtcaacacaggctccctgagcagagaggacctggaagaggagtgggaggtcatctaa
DBGET
integrated database retrieval system
