Salvelinus fontinalis (brook trout): 129815796
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Entry
129815796 CDS
T11136
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
129815796 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sfon01007
]
129815796 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sfon03016
]
129815796 (iars1)
Enzymes [BR:
sfon01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
129815796 (iars1)
Amino acid related enzymes [BR:
sfon01007
]
Aminoacyl-tRNA synthetase
Class I (U)
129815796 (iars1)
Transfer RNA biogenesis [BR:
sfon03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
129815796 (iars1)
Prokaryotic type
Other AARSs
129815796 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Plectin_PPL
Motif
Other DBs
NCBI-GeneID:
129815796
NCBI-ProteinID:
XP_055725897
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All DBs
Position
18:complement(58724826..58888779)
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AA seq
1266 aa
AA seq
DB search
MVEPVPESIHFPSEEKRILQLWKDKDCFQECLKQSKNRPKYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLDIKGPADVAKMGIAEYNRQC
RMIVMRYANEWENSVTRMGRWIDFKNDYKTLYPWFMETVWWVFRQLYDKGLVYRGVKVMP
FSTACNTPLSNFESNQNYKDVQDPSVIVNFPLLEDENVSLIAWTTTPWTLPSNLALCVNS
ELQYVKVKDNSTGKVYIMMESRLVALFKTEEEYTIMDKFPGKTLKGKKYKPLFDYFRKCG
ETGAFQVVMDNYVREEEGTGVVHQAPYFGADDYRVCMENNICQRDQVPVCPVDSSGCFTD
EVTDFVGQYVKDADKNIIKWLKEQGRLVNSSSFKHSYPFCWRSDTPLIYKAVPSWFIRVE
HMVEKLLENNDKCYWVPEFVRERRFGNWLRDARDWAVSRNRYWGTPIPLWCSDDFEEVVC
VGSMAELEELTGVKVTDLHRESIDQLTIPSRCGKGVLRRVTEVFDCWFESGSMPYAQAHY
PFENRKEFEDTFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPGLVVENYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLHKEDGISFLYNEATAKCSDNIMDKWIQSFTQSLIQFFKAEMDAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRFKGESGTEDCLGALENLFSVLFSMCRLMAPFTPFITEMM
YQNLRHLIDPASVEEKDSSSIHYLMLPLVRESLIDKRIESAVCQMQSVIELGRVIRDRRT
LPVKYPLKEVVVIHQDPEALRDITSLQKYILEELNVRQLTLSTDKDKYGISLRAEPDHMV
LGKKLKGAFKSITASIKELKSEQLETFQKTGSIVVDGQELHEEDLRLMYSFNQTSGSATQ
YEAHSDSQVLVLLDVTPDQSMLDEGVAREVINRIQKLRKKGHLVPSDEITVYYSCEPAGD
YLDSVIRAHTDFILATTKAPLETYPVPKGSGVIVQEKTQLKGSDLDLTIVKGAAASRAPL
TGPACAYVNLRLNNKEQEGVVLLENPKGDICLDMAKLRQVCASLFGLNNTKLCVFNGKTE
LTGKCDLLSLNGKTLSVTSGSSPSDSSPNSDSLVCPYVNLRLANCQPAECQSGDVGTLLL
VNPVGHDCLTHNALLSETAKLFGLRGRRLKLYLDDLLTQEMPAEWSVKTLDRKTVYVGVV
PTTAEA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccggttcctgaatccatccacttcccttctgaggaaaagaggatcctgcag
ctgtggaaggacaaggactgcttccaggagtgtctcaaacagtccaagaacaggcccaag
tacacgttctatgacgggcctccgttcgccacaggtctcccccactacggtcacatcctg
gcagggaccatcaaagacatcgtgactcgcttcgcccaccagagcgggttccacgtggac
cgccggttcggctgggactgtcacggcctgcctgtggagtatgagattgataagaccctg
gacatcaagggaccggccgatgtggccaagatggggattgctgagtacaacaggcaatgc
aggatgatcgtcatgagatacgctaacgaatgggagaactctgtaaccaggatgggacgg
tggattgactttaagaacgactacaagactctgtacccctggttcatggagacggtctgg
tgggtgttcaggcagctgtatgataaaggtctggtgtaccgcggggtgaaagtcatgccc
ttctctaccgcctgtaacacgccactgtccaacttcgagtctaaccagaactacaaggat
gtgcaggatccatcagtgatagtgaacttccctcttctggaggatgagaacgtgagcctg
atcgcctggacaaccaccccctggactctgcctagcaacctggctctctgcgtcaactca
gagttgcagtatgtcaaggtcaaagacaacagcactgggaaggtgtacattatgatggag
tccaggctggtggcactcttcaagacagaggaggaatacaccatcatggacaagttccct
gggaagacgctgaaggggaagaaatacaagcctctgtttgactacttcaggaagtgcggg
gagacgggggcgttccaggtggtgatggataactatgtcagagaggaggaggggaccgga
gttgtccaccaggcaccatactttggagctgatgattaccgtgtgtgtatggagaacaac
atctgccagagagaccaggttcccgtctgtcctgtggactcctctgggtgcttcactgat
gaagtcactgactttgtgggacagtatgtcaaggacgcggacaagaacatcatcaaatgg
ctgaaggaacagggtcgtctggtcaacagcagctctttcaagcatagctaccctttctgt
tggagatctgacactcctctgatctacaaggctgttcccagctggtttattagggtggaa
cacatggtggagaagctgctggaaaacaatgacaaatgctactgggttcctgagtttgtg
cgggagcgtcgtttcggtaactggctgagggatgcgcgtgattgggccgtttccaggaac
cgctattggggcacgcccatccccctctggtgcagcgacgactttgaggaggtggtgtgt
gtaggatccatggctgagctggaggagttgacaggagtgaaagtaactgatctgcatcgg
gagagcattgaccagttgactatcccgtcccgctgtggtaaaggcgtgttgcgcagggtc
acggaggtgtttgactgctggtttgagtcgggcagcatgccctacgcccaggcccactac
ccctttgagaacaggaaggagttcgaagacaccttccccgctgacttcattgctgagggc
atcgaccagaccagaggatggttctacaccctgctggtgttgtccaccgctctgtttggt
aaaccaccgttcaagaacgtcatcgtcaacggactggtgctggccagcgatggacagaag
atgagtaaacgtaagaagaactaccctgatcctggtctggtagtggagaactatggagcc
gatgccctgaggctctatctaatcaactccccggtagtgagagctgagaacctgcgtttc
aaagaggaaggagtcagagatgttctgaaggatgtcttcctcccctggtacaacgcctac
cgcttcctggtccagaacgtccagcgtctccacaaggaggacggcatcagcttcctgtac
aacgaggccacagccaagtgcagtgacaacatcatggacaagtggatccagtcattcacc
cagtctctcatccagttcttcaaagctgagatggatgcttacaggttgtacacggtggtg
ccaaagcttgtcaagtttgtggacatgctgaccaactggtacgtgaggaccaaccgtagg
cgtttcaagggagagagtggaacagaggactgtctgggggctctggagaatctcttcagt
gttctgttctccatgtgcagactgatggctcccttcaccccctttataacagagatgatg
taccagaacctgcgtcacctgatcgaccccgcctctgtagaggagaaggactccagtagc
atacactacctcatgctgccgctagtcagggagtcgttgattgacaagcgtatagagagt
gctgtgtgtcagatgcagtctgtcattgagctcggacgagtcatcagagaccgcaggact
ctgcccgttaagtatcctctaaaggaggtggtagtgattcaccaagatccagaagctctg
agagacatcacctccctgcagaaatacatcctggaggagttgaatgtccgtcagttgacc
ttgtccacggacaaagacaagtacggcatcagtctgcgggctgaaccggaccacatggtg
ctgggaaagaagctgaaaggagccttcaaatccatcacggcttccattaaggaactgaag
agtgagcagctggagaccttccagaagactggctccattgtggtggacggtcaggagctt
catgaggaggacctgaggttgatgtacagcttcaaccagacctcggggtcagcgacacag
tacgaggcccattctgactcacaggtgttggtgctgctcgacgtcactccagaccagtcc
atgctggatgagggtgtggctcgtgaggtcatcaaccgcatccagaaactacgcaaaaag
ggtcacctggtgccttctgatgagatcacagtgtactacagctgtgagccggcaggtgat
tacctggacagtgtgatccgggcccacacagacttcatcctggcaaccaccaaggcacca
ctcgagacctacccggtccccaaaggctccggcgtcatcgtgcaggagaaaacacagttg
aagggttcggacctggacctcaccatagtgaagggagcagctgcctctcgagctcctctg
actggaccagcctgcgcctacgtcaacctccgactcaacaacaaggaacaagagggtgtg
gttctcctggagaaccctaaaggagatatctgtctggacatggccaagctgaggcaggtc
tgcgccagtctctttggtctcaacaacaccaagctctgtgttttcaacggcaagactgag
ttgactggtaagtgtgatctgctgtctctgaatgggaaaaccctgtcggtgacctcaggc
tccagtcccagtgactcctctcccaactctgactctctggtgtgcccttacgtcaacctc
cgattggccaactgtcagcctgccgagtgtcagagtggagatgtggggaccctgctgctg
gtcaatcctgtcggacacgactgcctgacccacaatgctttgctgtctgagacggccaag
ttgttcggcctccgcggccgcaggctgaaactctacctggacgatctgctcacccaagaa
atgccagcagagtggtcggtgaagacgctggacaggaagactgtgtatgttggagttgtg
cccaccaccgcagaggcatag
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integrated database retrieval system
