Salvelinus fontinalis (brook trout): 129817771 Help Entry 129817771         CDS       T11136                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon04115   p53 signaling pathway sfon04145   Phagocytosis sfon04148   Efferocytosis sfon04350   TGF-beta signaling pathway sfon04510   Focal adhesion sfon04512   ECM-receptor interaction sfon04518   Integrin signaling sfon04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sfon00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     129817771   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129817771    04518 Integrin signaling     129817771  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     129817771    04148 Efferocytosis     129817771   09143 Cell growth and death    04115 p53 signaling pathway     129817771   09144 Cellular community - eukaryotes    04510 Focal adhesion     129817771   09142 Cell motility    04820 Cytoskeleton in muscle cells     129817771  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfon04131]     129817771   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfon00536]     129817771 Membrane trafficking [BR:sfon04131]  Endocytosis   Phagocytosis    Opsonins     129817771 Glycosaminoglycan binding proteins [BR:sfon00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129817771 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd EGF_3 TSP1_CFP_C EGF_CA TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN cEGF Laminin_G_2 Motif Other DBs NCBI-GeneID:  129817771 NCBI-ProteinID:  XP_055729292 LinkDB All DBs Position 20:34740375..34761358 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAESRDDNSVYDLFELVQIPKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVTKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPITARLRIGKGAVKDRFMGVLQNVRFVFGTSLEAILRNKGCQNSVLTDRI LIMDNPINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELKGLGVVVKELSNELRK VTDENKLLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVSDGECCPRCGTLSDYAEDGWSLWSEWTRCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGDG RQTEKCTKSPCPINGNWGPWSLWDTCSSTCGGGAQTRKRLCNDPAPKYGGKECQGDSKAT QLCNKNACPVDGCLSNPCFPGAKCTSFPDGTWSCGKCPTGYSGDGIKCKDVDECKEVPDA CFVFNGVHHCENTDPGYNCLPCPTRYSGPQPFGRGVEEAAAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADPMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDAILDDRDNCPFVYNPRQYDYDRDDVGDLCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQLDSDGDGRGDVCKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTPGQVRTLWHDPKKVGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMKDSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctattgatgctttggacctgcgagagcgtacgagtt gcagagagccgagacgacaatagcgtgtacgacctgttcgagctggtccaaatccccaag aaaaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaacccggacctgatccccgagctccccgagagctccttcagggacctcattgattcc atccacgccgagaggggattccttctcctcctcaacttcaagcagttcaagcggaccagg ggctccctcttgacggtggagaagcgggacggttccggagccgtgttcgagatcgtctcc aacgggaaagcgaacactctggatgtggttttctccaccgttactaagcaacaggtggtg tcgatagaagatgtggacttggcaacaggccactggaagaatattacgctgtttgtgcag gaggaccgggcgcagctgtatgttggctgtgaggaggtgaacacggcggaactggacgct cccatccagagcatcctcactcaggagactcccatcacagcgcgtctcagaatcgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgttcgctttgtctttggaacc agtttagaagcgatactgcgcaacaaaggatgccaaaactctgttctgactgatagaatc ctcattatggacaaccccatcaatgggtccagccctgccattaggactgactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggagctgaaggggttgggagtggtggtgaaggagctgtctaacgagctgcgcaaa gtgacggatgagaacaagctgttgatgaacagagtggggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgcaccgagtgc acttgtcagaactctgccacagtatgccgcaagatctcctgcccgctgatcccctgtgcc aacgccaccgtgtccgatggagagtgttgtccgcgctgtggaacactgagtgactatgcg gaggacggctggtccctctggtctgaatggacacgctgttccgtgtcttgtgggcggggc atccagcagagaggccgctcctgcgatcgcattaacaacaactgcgaaggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgtctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagatgga agacagactgagaagtgcaccaagtcaccctgccccatcaacggtaactggggaccctgg tcgctatgggatacctgctcttccacctgtggaggaggagcccagacacgtaaacgtctc tgcaatgaccccgcccccaaatatggtggtaaggagtgtcagggtgactccaaggccact cagctgtgcaacaagaacgcctgtcccgtcgatggctgtctgtctaacccctgctttcct ggggccaagtgcaccagctttcccgatggaacatggagttgtgggaaatgtcccactggt tactctggtgacggcatcaagtgcaaggacgttgacgagtgtaaagaggttcctgacgct tgcttcgtgttcaacggagtgcaccactgtgagaacactgaccctggctacaactgtctg ccctgtcccacacgctactctggacctcagcccttcggcaggggagtggaggaggccgcc gccaagaaacaggtgtgtacaccacgtaacccctgcttggatgggagccacgactgcaac aagaacgcccgatgtaactacctgggacactttgccgaccccatgtaccgctgtgagtgt aagcctggctatgctgggaacggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacctaccactgcaaaaaggacaactgc cccaaccttcccaactcaggccaagaagactatgacaaggatggtgttggtgacgcgtgt gacaacgatgatgacaatgatgccattctcgacgacagggataactgtccgtttgtgtac aaccccaggcaatatgactatgacagagatgatgttggagatctttgtgataactgtcct tacaacagcaaccctgaccagaccgacacagacaacaacggggaaggagacgcctgctct gtggacattgacggagatggtattctgaatgagaaagataactgcccgtacgtctacaac gtggaccagcgagacactgacctggacggtgtgggagacatgtgtgacaactgtcctctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagacaagtgtgacagt aaccaggacatcgatgaggacggccaccagaataacctggacaactgcccctacatcccc aacgctaaccaggccgaccatgacaaagacggcaagggagacgcctgcgaccacgatgat gacaacgacgggatccctgacgagaaagacaactgcagactggccttcaaccctgaccag ctcgactctgatggtgatggtcgcggagatgtttgcaaagacgactttgaccaagacaac gtccctgacatctacgacgtgtgtccggagaactttgacatcagcgagacggacttcagg aagttccagatggttcccctggaccccaagggaacttcccagatcgatcccaactgggtg gtcagacatcaaggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactccgtggacttcagtggaaccttcttcatcaatacagagaga gatgatgactacgccggctttgtgtttggctaccagtccagctctaggttctacgtggtg atgtggaagcagatcacacagacttactggagcaacaaaccaaccaaagctcagggatac tcaggactgtccatcaaggtggtcaactctactactggacctggagagcacctcaggaat gctctctggcacacaggaaacaccccaggacaggtgaggactctgtggcacgaccctaag aaagttggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatgaaggattctgggagcata tacgacaagacgtatgcaggcggaagactaggtctctttgtcttctcgcaagagatggta tacttctcagacctcaagtatgaatgcagagatgcataa

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