Salvelinus fontinalis (brook trout): 129818723
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Entry
129818723 CDS
T11136
Symbol
ttc3
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129818723 (ttc3)
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129818723 (ttc3)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129818723 (ttc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
wHTH_TTC3
TTC3_9th
zf-RING_2
TPR_1
zf-rbx1
TPR_2
zf-C3HC4
TPR_11
zf-C3HC4_2
zf-RING_UBOX
TPR_16
zf-RING_5
Prok-RING_1
TPR_17
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
PHD
ANAPC3
zf_RING_Vps8_fungal
TPR_9
zf-RING_Vps41
TPR_8
Motif
Other DBs
NCBI-GeneID:
129818723
NCBI-ProteinID:
XP_055730873
LinkDB
All DBs
Position
2:complement(40496181..40530143)
Genome browser
AA seq
1833 aa
AA seq
DB search
MSDSDSGPEFLDCDIRHGAKLIYDKDSPFVALQPPDVIYDRWNKIPVILKKKAAQLMKLY
AFWYHILLRQENHNTTRWAVQVGFLDSNVSNDLSLKRLHKIEILEAILRAMEKGCLLEDQ
TRHMIWISNKFNLHVPEVLDDAIRWLERTGEPRIKLRVQELGPRGNCFAALQLIFTEYAH
YTQAMGVDRKKMMRELAQDPGQWSIERSEEMKTRGNDQFQKKKYDAAVKCYSKAIKYHPE
NHIIYGNRALCYIRCEKYLKAVGDGKRATLIQPEWAKGHYRYCEALFLLGEHKQAIEANE
WGQTLCKADPEGMKDLLQQHAKLIIEMEESKCHRAEERKAGRSNKTAAKKVSSKRTESNT
RADTTESQQTAKPTSKVEPSAKNTTPENKGLEVKVESQTQPGAGRAHSVDNTKVPKEMKV
EMADKNSSKPEPCASEKTKGKNRNQQSKEKVVSGSSRDPSVRDALMSAVQDAHMALADQR
CRNAEQAFSQALSILATSTPKELGLCALDQVLLIYGHASALIEIGQPEELAEAQKDFEKI
KHFEERKFQCLVFYGIGKAYQKENRFPLALEQFSDSMQMVKKKITPGKLTWPTTKVIVEE
SKLEYFKELLEESIEMCKFPPKPDAICRHQNCHGHSKIEIYFTDPDFKGFIRMVCCQSCK
VEYHINCWKKLKATAFSDKNEKDFLQGMCFTPDCGGRICHIKIYGSTGLVKCEFEASIDK
PMGKATLRVNQKCTSLKKLKSKEDRKLRRKQHRQDASLSTQAKNDEIALENGETIVIEQK
ASSSTWLAYGDRVLLQISERKDLFRAESHNISVLMENLKPWMDLDQIKGNKLGTSYTERQ
VETLGDVVELLLEKKNRVWARVFIHGLSGCLVTSPKLHDWAHQLNSAGLNSAALFIDRYA
DHLEQLDLAPLLNFAPLQDMLIEKFGTMPEFFSRLGLTLTEYLKQAPSQEMRLFIWTLEE
HRDQYATCHTVLDDYFEIMDGHCLVIKKTGIENEINSPIKTRNRNRKKKQKEPKGSVIVL
SGMRGGTSREEDDEDFLHDSLMFLDSTDPFSIPNHLRNQVAEFEGQYNIGSRSSHYNRIL
DNNPDPTKESLYDYFAQILEEYGPLGAQDPLLVGELDNFPPDAQQKIHEAGGLEHFLLES
LRFVMTDNLLGLMKHAVSLQDANTHRMDNLDFIGDIPNGLSLNPSAMEFLPNSHDSGPGD
YDEEPVAIINMRPNPVEFTGYLQVIANLPSPYVLPVFGSPPAPPANEIARAIGTLRAEDK
SYTNHDPHNLEDFDLYISGMDEQGLCETVYAPVHSAKAHGKTAVEVQVVTCDALSEVAVN
TEPCEPFEGNNGDMNKKEKSNAEFEQQIQQMKQDYGAVKQRRQTEISALEGEQEEINHSI
QIIHKELGLFQQKLEEEVKKDQQEKKENQETLKALKVEIKELAESQESISKNIHKKNKEY
ETQLNTFLELSNQSAAEKMSLEDEIKRCRDLCAKATRRSQGAELSILENQRSRGLRCLYR
SLSDARAILAKLKEVSPRLPSQILQSATDAWMACAQEAEEKIRSTEAQYQDQMEQVKRGT
RLCTLPPVAVPSAPWPPPVPALQQLLCHPVHMRAPLYSHPGFPRAPPPPAMDQSVALPSG
MAGVPASATTKRPITRAPQPNQASRPPAPQPTNVYDRIVDRLSVMFPHYSRPVLSKFIGE
MRTANRGCLNSLSYQEVINRVAQLILDHQDSTREQLSSAGRGDTAGTPSRSDSPASVHST
GPPTHVWKSVGAQGHSKSKALNMEDPCIICHEDMSQEDLCVLECRHSFHRECIKSWLKEQ
STCPTCREHALLPEDFPLLPGRIRRGHTPAAFS
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagactccggtccagagtttttggactgcgacatcagacacggggcgaaa
cttatctatgacaaagacagtccctttgtagccctgcaacctccagatgttatatatgat
cgatggaataaaatccctgtcattttgaaaaagaaggcggcccagttaatgaaattgtat
gccttttggtaccacattctgctgcgtcaagagaatcacaacaccacacgctgggctgtg
caagtgggcttcctagactcaaatgtcagcaatgacttgagtctgaagagactgcacaag
atagaaatattggaagctatcctcagggcgatggaaaaaggatgtttattagaagatcaa
acaaggcatatgatctggataagcaataaatttaacttgcatgtgccagaggtcctggac
gacgcgatacgctggctggagcggacaggagagccccgcatcaagctgcgggttcaggag
ctgggccccagagggaactgctttgctgccctgcagctcatcttcactgagtatgcccac
tatacacaggccatgggagtcgacagaaagaaaatgatgcgagagcttgcacaggacccc
ggccaatggtctattgagagaagtgaagagatgaagactagaggaaatgatcagtttcag
aaaaagaaatatgatgcagcagtcaagtgttactcaaaagccatcaaatatcaccctgaa
aaccacattatctatgggaaccgagcactttgttatatccgttgtgaaaaatatttaaaa
gctgttggggatggaaaacgagccactttaatacaaccagagtgggcaaagggtcactac
cggtactgtgaggcgctgttcctactgggggaacacaagcaggcgatagaggccaacgag
tggggccagaccctgtgcaaggctgacccagagggcatgaaggacctgctgcagcaacat
gccaagttgatcatagagatggaggagagcaagtgccaccgggcagaggaacgtaaagct
ggaagatcaaataaaactgcagctaagaaagtttcaagtaaaaggacagagagtaacacc
agagcagacactacagagtcacaacagactgctaaacccaccagtaaggttgagccttcc
gctaaaaacactactcctgagaacaagggcttggaagtcaaggtggaaagccagacacaa
ccaggtgcaggaagagcacattcggtggataataccaaggttcctaaagagatgaaagtt
gaaatggctgataaaaatagcagcaaaccggagccctgcgcttcagagaaaacaaaaggg
aagaacagaaaccagcagtcaaaggaaaaggtggtatccggcagctccagagaccctagt
gtgcgggatgcactgatgtccgctgtgcaggacgcccacatggccctggccgaccagcga
tgccgcaacgcagagcaggccttctcccaggccctcagcatcctggcgaccagcacacca
aaggaacttggactctgtgctcttgaccaagttttgctgatttatggccacgcctcagct
ctgatagagattggtcaaccagaggaacttgctgaagctcaaaaagactttgaaaagatc
aaacattttgaagagaggaagtttcagtgtctggttttttatggcattggaaaggcatat
cagaaggagaaccgatttccacttgctctggaacagttttctgattctatgcaaatggtt
aagaaaaagataacacctggtaaactgacctggcccactactaaagttattgttgaggaa
agtaagctggaatatttcaaggagctgctagaggaatccatagagatgtgcaaatttcca
cctaaaccagatgccatttgtcggcatcagaattgccacggacattccaaaatagaaatc
tacttcacagatccagattttaagggtttcattcggatggtttgctgccaaagctgcaaa
gtggagtaccatatcaactgttggaagaagttgaaagcaacagcattctctgataagaat
gaaaaggatttcctgcagggaatgtgctttactccagactgtgggggtagaatctgtcat
attaaaatctatggttcaacagggcttgtcaaatgtgagtttgaagcatctattgacaaa
cctatgggtaaagcaacattgagagtaaatcagaaatgtacaagtctcaagaagttgaaa
tccaaagaggatcgtaaactcaggcggaagcaacataggcaagatgcttctctgtctacg
caagccaagaatgatgaaatagctttggagaacggggaaaccattgtcatagaacagaag
gcttcatcctccacctggctagcttacggggatcgtgttctgcttcagatcagtgagcgt
aaagacctattcagggctgagagccacaacatctctgtcctgatggagaaccttaagcca
tggatggacctggatcagatcaaggggaacaagctgggcacttcgtacactgagagacag
gtggagaccctgggggatgttgtagagctcctcctggaaaagaagaaccgggtgtgggcc
cgtgtctttatccatggcctaagcggctgtctggtcaccagccccaagctgcacgactgg
gcccaccaactgaacagtgcaggtctgaattcagctgcactgttcattgaccgctatgca
gaccacctggagcagctcgacctcgctcctttgctcaattttgcccccctgcaggacatg
ctcatagagaagtttggaaccatgcctgagttttttagccgcctaggcctgactctaacg
gagtacctgaagcaggccccttcccaggaaatgaggctgtttatctggactctggaggag
cacagagaccagtacgccacctgccacactgtgctggatgattattttgaaataatggat
ggacattgtttagtgattaaaaagacagggattgaaaatgaaattaattcccctattaag
actaggaacagaaaccggaaaaaaaagcagaaggagccaaaggggtcagttattgtcctg
tcgggaatgagaggtggtacctcaagagaggaggacgacgaggatttcttacatgactct
ttaatgttccttgactccactgacccattcagcattcccaatcatcttcgaaatcaggtg
gcagagtttgagggacagtacaacattggcagtcgcagtagccactacaatagaatattg
gacaacaaccctgacccaactaaggagagtttgtacgactactttgcccagatcctagaa
gagtacggtcccttaggggcccaggaccccttgctggtgggtgagctagacaacttccct
cctgatgcccagcagaagatccatgaggcaggtggccttgagcacttcctcctcgagtcg
ctgcgcttcgtcatgaccgacaacctcctgggcctcatgaagcacgctgtgtcactgcag
gatgccaacactcacagaatggacaatctagacttcataggggatatccccaatggactc
tctctaaacccttctgctatggaattcctcccaaactctcatgactctggacctggggat
tatgatgaagagcctgttgccatcattaatatgcggcctaacccggttgaattcactggc
tatcttcaggtgatcgccaatctccccagcccatatgttttacctgtttttggctctcca
cctgccccccctgccaacgaaatagcacgtgccattggaactctgagagcggaggacaag
tcatatactaaccatgatccgcataaccttgaggattttgacctttatattagcggcatg
gatgaacagggattgtgtgagactgtttatgctcctgttcacagtgccaaggcacatgga
aagactgcagtggaagtacaggtagtaacttgtgacgcattgagtgaagtggctgttaac
acggagccttgtgagccttttgaagggaataatggagacatgaacaagaaagagaagagt
aatgcagagtttgagcagcagatccagcaaatgaagcaggattacggtgctgtgaaacaa
agacgccaaacggagatatctgccctagaaggagagcaagaggaaatcaaccattcaata
cagatcatccataaagagctgggcctgttccagcagaagctggaggaggaggtgaagaag
gaccaacaggagaagaaagagaatcaggaaacactgaaggccttaaaggttgagataaag
gagctggcggagtcacaggagagcatttctaagaacatccacaagaagaacaaggagtat
gagacccagctgaatactttcctggagctgagtaaccagtcagctgctgagaagatgagc
ctggaggatgagatcaagcggtgcagagacctgtgtgccaaggcaactagaaggtctcag
ggagcagagctgtctatattggagaaccagcgtagccgcggcctgcgctgcctctacagg
tctctgtctgatgccagggccatcctggccaaactcaaggaagtctcacccagattacct
tcccaaattctccagtcagccacagatgcttggatggcatgtgctcaagaagcagaggag
aaaatccgctcaactgaggcacagtaccaggatcagatggaacaggtaaagagggggacc
aggctgtgcactctacccccagttgcagtccccagcgccccctggcccccacctgtaccg
gctctccagcagctcctttgccatccagtgcacatgagagcccccctctatagtcacccg
gggtttcctagagcccctcctcccccagccatggatcagagtgttgcactgccctccggt
atggctggagttccagctagtgcgaccactaaacgtcctatcacgagggcgccccagccg
aaccaggcttccaggccaccggccccacagcccaccaatgtgtacgatagaatcgtagat
cgcctcagcgtcatgttccctcactatagcaggcctgtgctgtccaagttcattggggag
atgcgcacggccaacagaggctgcttgaactccctgtcctaccaggaggtcatcaacaga
gtggcccagctcatcctggaccaccaggactccaccagagagcagctgagcagtgccggt
agaggtgacactgctgggaccccttcgcgctctgactctccagcctctgtccactccact
ggaccccccacccatgtctggaagagtgtgggtgcccagggacactctaagtcaaaggcg
ttgaacatggaggatccctgtatcatctgccatgaggacatgtcccaggaggacctatgt
gtgctagagtgcagacatagcttccacagagagtgtattaagtcatggctgaaggagcag
agcacctgtcccacctgcagagagcacgctctcctgcctgaggatttccctctgctacct
ggcagaatacgcaggggccacacgcccgctgccttctcttaa
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integrated database retrieval system
