Salvelinus fontinalis (brook trout): 129824006
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Entry
129824006 CDS
T11136
Symbol
dhx9
Name
(RefSeq) ATP-dependent RNA helicase A isoform X1
KO
K13184
ATP-dependent RNA/DNA helicase DHX9 [EC:
5.6.2.6
5.6.2.4
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sfon03041
]
129824006 (dhx9)
03012 Translation factors [BR:
sfon03012
]
129824006 (dhx9)
Enzymes [BR:
sfon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
129824006 (dhx9)
5.6.2.6 RNA 3'-5' helicase
129824006 (dhx9)
Spliceosome [BR:
sfon03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
129824006 (dhx9)
Translation factors [BR:
sfon03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
129824006 (dhx9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
Dicer_dimer
ResIII
AAA_19
nSTAND3
AAA_14
ATPase
Motif
Other DBs
NCBI-GeneID:
129824006
NCBI-ProteinID:
XP_055739225
LinkDB
All DBs
Position
26:complement(25566043..25586473)
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AA seq
1265 aa
AA seq
DB search
MADIKNFLYAWCGKKKLTPSYDIRAAGNKNRQKFLCEVRIEGFNYTGMGNSTNKKDAQAN
AARDFVNYLVRVGEMNAAEVPALGASGPDFSVPDCGGGGDGGNVGFGSLPPSGPIPPHLV
VKAEQGNAPSAPVPGVTGLGYSGGSGNYSGGGANSNAPWDRGANLKDYYSKRDEQEAQAT
LESEEVDLNAGLHGNWTLENAKARLNQFFQKEKNQTDYKYSQVGPDHNRSFIAEMQLFVR
QLGRKIIAREHGSNKKLAAQSSALSIVRQLYHLGVIEPYSGVTKKKEGEILEAFEVNVVD
DLQHQLQSMAQELGVAIPPPPPDPSTPVSLVQGKMAVFEPSQKQSMAGVVPWSPPQVNWN
PWTSSNIDDGPLAFCTPEQISTDLHHELTYQLEQDQSLQKVIGERDGLPVKKFEEEIMTA
VQGSSVVIIRGATGCGKTTQVPQYILDQFIKSGRASECNIIVTQPRRISAVSVAERVSYE
RGEDVGKSCGYSVRFESILPRPHASIMFCTVGVLLRKLEAGIRGISHVIVDEIHERDINT
DFLMVVLRDVVQTYPEVRIILMSATIDTTMFREYFFNCPVIEVFGRTFPVQEYFLEDCIQ
MTHFIPPPSDRKRKDKDEDGGDEEANCNVICGPEYTPETKRSMAQMNEKETPFELVEALL
KYIETLQVAGAVLIFLPGWNLIYSMQKHLEMNPHFGRQRYLILPLHSQIPREEQRRVFEP
VPENITKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWGSKTNLEQR
KGRAGRVRAGFCFHLCSRARFDKLETHMTPEIFRTPLHEVALSIKLLRLGAIGHFLSKAI
EPPPLDAVIEAEHTLRELDALDTNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVC
TISAASCFPEPFINDGKRLGYVHRNFAGTRFSDHVALLSVFQAWDDVRMGGEDAESRFCE
HKRLNMSTLRMTWEAKVQLKEILINSGFPEECLMTQMFNNVGPDNNLDVVISLLTYGSYP
NVCYHKEKRKILTTEGRNALIHKCSVNCPFSSQDMTYPSPFFVFSEKIRTRAISAKGMTL
VSPLQLILFASKKITSNGEIVELDDWIKLKIPHNVAGCIAALRAGMEALVVEVTKDPEYI
KQLDPTNERMLNIIRQISKPSAAGLNLMVNNKRFGDGPRPPKMGRFDGGGGGGYQGGGGG
GYRGGGYRGGGGYQGGGGYRGGGYRGGGGYGGGNRGGGGYGGGNRGGGGYGGGNRGGEYR
GGQGY
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcaagaacttcctgtatgcttggtgtgggaaaaagaaactaacacccagc
tatgacattcgagccgctggaaacaaaaaccgacagaagtttctgtgtgaggttcgtatt
gagggattcaactacactggaatgggaaactcaaccaataagaaggatgcccaggcaaat
gctgctagagactttgtcaattatcttgtccgagttggagaaatgaatgcagcagaagtc
ccagcccttggggcaagtggacctgacttcagtgtgcctgactgtggaggagggggtgat
ggagggaacgttggctttggaagtcttcctccaagtggacctatccctcctcacctggtt
gtgaaagctgagcaagggaatgcaccttctgcgccagtcccaggtgtcactggtttggga
tattcgggcggtagcggcaattattccggaggtggcgcaaacagcaatgctccgtgggat
cgtggggccaatctaaaggactactactcaaagagagatgagcaggaggcacaggcgact
ctggagtctgaggaggtagatctgaacgcaggactccatggcaactggactttagagaac
gccaaggcccgtctgaaccagtttttccagaaggagaagaatcaaacagattacaaatac
agccaagttgggcctgaccacaacaggagctttattgctgagatgcagttatttgtaaga
cagcttggtagaaagataattgcccgtgagcatggctctaacaagaagcttgcggcccag
tcctctgcgctgtctattgtccgtcaactttaccacctgggtgtcattgagccttattct
ggtgtcactaagaagaaagagggggaaattttggaagcttttgaggtgaatgtggtggat
gatctgcaacatcagctgcagagtatggcccaagaactgggtgttgcaattccacctcca
ccacctgatccaagtactccagtgtctttggtccaagggaagatggctgtgtttgagccc
tcccagaaacagagcatggccggggtggtgccctggtcccctccgcaagtcaactggaac
ccctggaccagcagcaatattgacgatggaccactagcattttgcaccccagagcaaatc
agcactgacctccaccatgagctgacttatcaattggaacaagatcaaagcctacagaag
gtcattggggagcgagatgggcttccagtgaagaaatttgaggaggagataatgactgcc
gttcagggcagctcagtggtgatcattcgaggggcgaccggctgtggcaaaaccacccag
gttcctcagtacatcctggatcagttcatcaagagtgggagggcgtccgagtgtaacatt
attgtaacccagccccggcgtatcagtgcagtgtctgtggcagagcgtgtttcctacgag
agaggagaggatgtcggtaagagctgtgggtacagcgtccgctttgaatccatccttcca
cgaccccatgccagcatcatgttctgcactgttggtgtgttactgcggaagctggaagca
ggtattcgcgggatcagccatgtgattgtggatgaaatccacgagagagacatcaatact
gacttcctcatggtggtgctgagggacgtggtccagacctacccagaggtccgcatcatc
ctcatgtctgccaccatcgacaccaccatgttcagagagtacttcttcaactgccctgtc
atcgaggtgtttggccgcacattcccagtacaagagtactttttggaagattgcattcag
atgacacatttcattccacctccgagtgatagaaagaggaaggacaaggatgaggacgga
ggagatgaagaggccaactgtaatgtgatatgtgggccagagtacaccccagagactaag
cgctccatggcccagatgaatgagaaggagactccctttgagctggtggaggccctgctg
aagtacatcgagaccctccaggttgccggggccgtgcttatcttcctgcccggctggaac
ctcatctactccatgcagaaacacctggagatgaacccacactttgggcgtcaacggtac
ctgattctgcctctccactctcagatccccagagaggagcagaggagggtatttgagcct
gtgcctgaaaacatcaccaaggtgatcttgtcaacaaacattgcagagaccagtattacc
atcaatgatgtagtatatgtcatcgactcttgcaagcagaaagtgaaactgttcacgtct
cacaacaacatgaccaactacgccacggtctggggctccaagaccaacctggagcagagg
aagggtcgcgccggccgcgtccgggctggcttctgctttcatctgtgtagcagagcacgc
ttcgacaaactggagacccatatgacccctgagatattccgtactcctctccacgaggta
gccctgagcatcaagctgctgagactaggagccattggccatttcctttccaaggccatc
gagccccctcccctggacgcggttatagaggcagaacacacactgagagaactggatgca
ttggacacaaacgacgagttgactccgcttggtcggatccttgcaaagcttccaatcgag
ccgcgtctggggaagatgatgattatgggctgcatattcaatgttggagatgcggtgtgc
acgatctcagcagcctcctgcttcccagagcccttcatcaatgatggcaagcgcttgggc
tatgtgcaccgcaactttgctggcacccgcttctcagaccacgtggcccttctgtcagtc
ttccaggcttgggacgatgtgagaatgggaggtgaggatgcagagtccagattctgtgaa
cacaagaggctcaacatgtccacactgaggatgacctgggaggccaaagtgcagctgaag
gagatcctcatcaactctggcttccctgaggagtgcttgatgacacagatgttcaataac
gttggacccgacaacaaccttgacgtggtcatctctctcctgacatacggctcctatccc
aacgtgtgctaccacaaggagaagaggaagattctcaccactgaggggcgcaatgccctc
atccacaaatgctctgtcaactgccccttcagcagccaggacatgacctacccatcaccg
ttcttcgtctttagcgaaaagatccggactcgagccatctcagccaaaggaatgacacta
gtcagcccactccagctgatcttgtttgcctccaagaaaatcacatcaaacggggaaatc
gttgaactggatgattggatcaaactgaagataccgcataacgtggctggctgcatagct
gctttgagggctggaatggaggcacttgttgtggaagtcaccaaagaccctgagtacatc
aaacagctggatcccacaaacgagcgcatgctcaacatcatccgtcaaatctccaagcca
tccgcagctgggcttaacctcatggtcaacaataaacgttttggagatggtccacgtcct
cccaagatgggcaggtttgacggaggcggtggtggagggtaccagggaggaggcggtgga
ggatacaggggaggaggttacagaggcggtggaggataccagggcggcggcggatacagg
ggcggaggttacagaggtggtggtggttatggaggggggaacaggggtgggggtggttat
ggaggcggaaacaggggtggtggtggttatggaggcgggaacaggggtggtgaatacaga
gggggccagggatattag
DBGET
integrated database retrieval system
