Salvelinus fontinalis (brook trout): 129825512 Help Entry 129825512         CDS       T11136                                  Name (RefSeq) thrombospondin-1-like   KO K16857   thrombospondin 1 Organism sfon  Salvelinus fontinalis (brook trout) Pathway sfon04115   p53 signaling pathway sfon04145   Phagocytosis sfon04148   Efferocytosis sfon04350   TGF-beta signaling pathway sfon04510   Focal adhesion sfon04512   ECM-receptor interaction sfon04518   Integrin signaling sfon04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:sfon00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     129825512   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     129825512    04518 Integrin signaling     129825512  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     129825512    04148 Efferocytosis     129825512   09143 Cell growth and death    04115 p53 signaling pathway     129825512   09144 Cellular community - eukaryotes    04510 Focal adhesion     129825512   09142 Cell motility    04820 Cytoskeleton in muscle cells     129825512  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:sfon04131]     129825512   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:sfon00536]     129825512 Membrane trafficking [BR:sfon04131]  Endocytosis   Phagocytosis    Opsonins     129825512 Glycosaminoglycan binding proteins [BR:sfon00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    129825512 SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC VWC2L_2nd TSP1_CFP_C EGF_3 TSP1_ADAMTS Laminin_G_3 EGF TSP1_CCN Laminin_G_2 Motif Other DBs NCBI-GeneID:  129825512 NCBI-ProteinID:  XP_055741640 LinkDB All DBs Position 27:36887371..36905760 Genome browser AA seq 1172 aa AA seqDB search MKLTGIFLLLMLWTCESVRVAENRDDNSVYDLFELVQVSKKNHGVTLVKGDDPYSPAYKI LNPDLIPELPESSFRDLIDSIHAERGFLLLLNFKQFKRTRGSLLTVEKRDGSGAVFEIVS NGKANTLDVVFSTVTKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYVGCEEVNTAELDA PIQSILTQETPATARLRIGKGAVKDRFMGVLQNVRFVFGTTLDAILRNKGCQNSVQTDEI VLIDDTINGSSPAIRTDYTGHKTKDLQMICGFSCEDLAGMFKELRGLGVVVKELSNELRK VTDENKFLMNRVGIHSGVCLHNGIVHKNKAEWTVDDCTECTCQNSATVCRKISCPLIPCA NATVPDGECCPRCGTPSDYAEDGWSLWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSV QTRDCYLQECDKRFKQDGAWSHWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCQGEG RQTEKCTKSPCPINGNWGPWSLWDTCSATCGGGAQTRKRLCNDPAPKYGGKECQGDSKAS QQCNKNACPIDGCLSNPCFPGTKCTSFPDGTWRCGKCPSAYSGDGIKCKDIDECKEVPDA CFVFNGVHRCENTDPGYNCLPCPTRYSGPQPFGRGVEEATAKKQVCTPRNPCLDGSHDCN KNARCNYLGHFADLMYRCECKPGYAGNGHICGEDTDLDGWPNQDLVCVENATYHCKKDNC PNLPNSGQEDYDKDGVGDACDNDDDNDGIADDRDNCPFVYNPRQYDYDRDDIGDRCDNCP YNSNPDQTDTDNNGEGDACSVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPL EHNPDQVDSDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDD DNDGIPDEKDNCRLAFNPDQIDSDGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFR KFQMVPLDPKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGFDEFNSVDFSGTFFINTER DDDYAGFVFGYQSSSRFYVVMWKQITQTYWNNKPTKAQGYSGLSIKVVNSTTGPGEHLRN ALWHTGNTTGQVKTLWHDPKNIGWKDFTAYRWHLIHRPRTGHIRVVMYEGKKIMADSGSI YDKTYAGGRLGLFVFSQEMVYFSDLKYECRDA NT seq 3519 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttctgctgttgatgctttggacctgcgagagcgtacgagtt gcagagaaccgtgacgacaatagcgtgtacgacctgttcgagctggtccaagtctccaag aagaaccacggagtgaccctagtgaagggcgacgacccatacagtcccgcctacaagatc ctcaatccggacctgatccccgagctccccgagagttccttcagggacctcatcgattcc atccacgccgagaggggcttcctcctcctgcttaacttcaagcagtttaagcggaccagg ggctccctcttgaccgtggagaagcgggacggatccggagccgtgttcgagatcgtctcg aatggaaaagcgaataccctggatgtggttttctccaccgttactaagcaacaggtggtc tcgatagaagatgtggacttggcgacgggccactggaagaatattacgctgttcgtgcag gaggaccgcgcgcagctgtatgttggctgtgaggaggtgaacacggctgaattggacgct cccatccagagcatcctcactcaggagactcccgccacagcgcgcctcaggatcgggaag ggagcggtgaaggaccggttcatgggggtgctccaaaacgtgcgctttgtttttggaacc actttggacgcgattctgcgcaacaagggatgccaaaactctgttcagactgatgagatc gtccttatcgacgacaccatcaatgggtccagccctgccattaggacggactacactggc cacaaaactaaagacctgcagatgatctgtgggttctcctgtgaggacctggctggcatg ttcaaggagctgagggggttgggagtggtggtgaaggagctgtccaatgagctgcgcaaa gtgacggatgagaacaagtttttgatgaacagagttgggatccacagtggagtctgtctg cacaacggcatcgtccacaagaacaaggccgagtggaccgtcgacgactgcaccgagtgc acttgtcaaaactctgccaccgtgtgccgtaagatctcgtgccccctgatcccttgtgcc aacgcaaccgtgcccgatggagagtgctgcccgcgctgtggaacaccgagcgactatgcg gaggatggatggtccctgtggtctgaatggacccactgttccgtgtcttgtgggcggggc atccagcagagaggccgctcctgcgaccgcatcaacaacaactgcgagggaacctccgtc caaaccagggactgctaccttcaggagtgtgacaaacgcttcaagcaggacggtgcctgg agccactggtccccctggtcttcctgctcggtcacctgtggggcgggtgtcatcacccgt atccgcctctgcaactcccccacaccccagctgggaggcaaggactgccaaggagagggg agacagactgagaagtgcaccaagtcaccctgccccatcaacggtaactggggaccctgg tcactatgggatacctgctctgccacctgtgggggaggagctcagacacgtaaacgtctc tgcaacgaccccgcccctaaatatggtggtaaggagtgccagggtgactccaaggcttct cagcagtgcaacaagaacgcctgtcccatcgatggctgtctgtccaacccttgcttccct gggaccaagtgcaccagcttccctgatggaacatggaggtgtggaaaatgcccctctgct tactctggtgacggcatcaagtgcaaggacattgatgagtgcaaagaggttcctgacgct tgcttcgtattcaatggagtacaccgctgtgagaacactgaccctggctacaactgtctg ccctgtcccacacgctactctggacctcagcccttcggcaggggagtggaggaagccacc gccaagaaacaggtgtgtacaccacgtaacccctgcctggatgggagccacgactgcaac aagaacgcccgctgtaactacctgggacactttgccgacctcatgtaccgctgtgagtgt aagcccggctatgctggaaatggacacatctgtggtgaggacacggacctggacggatgg cccaaccaagacctggtctgtgtggagaacgccacataccactgcaaaaaggacaactgc cccaaccttcctaactcaggccaagaagactacgacaaggacggtgttggtgacgcttgt gacaacgatgatgacaatgatggtattgctgacgacagggataactgtccgtttgtgtac aaccccaggcaatatgactatgacagagatgatatcggagatcgttgtgataactgtcct tacaacagcaaccctgaccagacagacacagacaacaacggagaaggagacgcctgctct gtggacattgacggagatggcattctgaatgagaaagataactgcccgtacgtctacaac gtggaccagagagacactgacctggacggtgtgggagacatgtgtgacaactgtccgctg gaacacaaccctgaccaggttgactctgatgacgaccgtgtgggagataagtgtgacagc aaccaggacatcgatgaagacggccaccagaacaacctggacaactgcccctacatcccc aacgctaaccaggccgatcacgacaaagacggaaagggagacgcttgcgaccacgatgat gacaatgacgggatcccagacgagaaagataactgcagactggccttcaaccctgaccag atcgactccgatggtgacggtcgaggagacgcttgcaaagacgactttgaccaagacaat gtgcctgacatctacgacgtgtgtccggagaactttgacatcagcgagacagacttcaga aagttccagatggttcccctggaccccaagggaacgtcccagatcgaccccaactgggtg gtcagacatcagggcaaagagctggtccagaccgtcaactgtgaccctggcattgctgtt ggttttgatgagttcaactctgtggacttcagtggtaccttcttcatcaacacagagaga gatgatgactacgccggctttgtgttcggctaccagtccagctccaggttctacgtggtg atgtggaaacagatcacacagacctactggaacaacaaacccaccaaggctcagggatac tcaggactgtccatcaaggtggtcaactccactactggacctggagagcacctcaggaac gctctctggcacactggcaacaccacaggacaggtgaagactctttggcacgaccctaag aacattggctggaaagacttcacagcctacagatggcacctgatccacagaccaagaaca ggacacatcagagtggtcatgtacgaggggaagaagatcatggctgattctgggagcata tacgacaagacgtacgcaggcggaagactaggcctctttgtcttctcccaagagatggtg tacttctcagacctcaagtatgaatgcagagatgcataa

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