Salvelinus fontinalis (brook trout): 129827372
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Entry
129827372 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04210
Apoptosis
sfon04217
Necroptosis
sfon04510
Focal adhesion
sfon04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129827372
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129827372
04217 Necroptosis
129827372
09144 Cellular community - eukaryotes
04510 Focal adhesion
129827372
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129827372
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sfon01002
]
129827372
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129827372
03029 Mitochondrial biogenesis [BR:
sfon03029
]
129827372
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129827372
Peptidases and inhibitors [BR:
sfon01002
]
Peptidase inhibitors
Family I32: IAP family
129827372
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129827372
Mitochondrial biogenesis [BR:
sfon03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
129827372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
Motif
Other DBs
NCBI-GeneID:
129827372
NCBI-ProteinID:
XP_055744124
LinkDB
All DBs
Position
29:complement(7627064..7638935)
Genome browser
AA seq
468 aa
AA seq
DB search
MMSSPGRDSDLESDHAVDWSMMDMRLDSFRGSLLAQQVSAERLARAGFYFTGQADKVRCF
SCHKTVENWCGGDAPAERHAEVSPTCKFLSCTHRSRVNSLQGAMLTNEPHYNEDAEDMEF
RLRTGEVVDESTYPMVPHMVSEDSRFNTFGPWPSTSSVQPRELAQAGLFYMGVSDRVQCF
CCGGMLGGWQPGDTAWGEHSKHFPYCFFILGHDVGNLPSQAGREGDVGETRPRPGPRVPM
QSFEERLGSFAGIQHTIDHERLARAGFYNTGAPDRVVCFCCGGGLKGWQPDENPWEEHAK
HYPGCSFLLAEKGQEFVSSVQLQGPDWNNAASSHLNGCSSHGTEVLRSAMAQRAVEMGLE
PALVERTILERIRRAGTGYSTLETLLQDCFNRGPDSDAETAENHDEDPFEKLRKLQREKQ
CKVCMDRDICMVFIPCGHLVVCKECSEALGKCPICCAAITQKIKTYIS
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaagccccgggagagacagtgatctggagtcagaccacgcagtagactggtcc
atgatggacatgcggctggactcgttccggggttccctcctggcccagcaggtgtcagcg
gagaggctggcccgcgctgggttctacttcacgggacaggctgacaaggtgcgctgcttc
agctgccacaagactgtagagaactggtgtggaggggacgcacccgcggagaggcacgcg
gaggtctcccccacctgtaagttcctgagctgcacccatcgatccagggttaactctctt
caaggtgccatgctgaccaacgaaccccactacaacgaagacgctgaggacatggagttc
cgcctgagaacgggagaagtggtggatgagtccacctaccccatggtcccgcacatggtc
agcgaagactcccggttcaacaccttcggcccgtggccctccacatcctcggtccagcct
agagagctggcccaggcagggctcttctatatgggggtgagcgaccgggtgcagtgcttc
tgctgtggagggatgctgggcggctggcagcctggggacacggcatggggggagcactcc
aaacacttcccctactgcttcttcatactggggcatgatgtggggaacctcccctctcag
gcggggagagagggggatgtaggggagaccaggccacgcccgggtcctcgggtccccatg
cagagctttgaggagaggctaggcagctttgcaggaatccagcacactattgaccacgag
aggctggccagagcaggcttctacaacacaggagctccagaccgtgtggtgtgtttctgc
tgtggtggaggtctgaagggctggcagccggacgagaatccctgggaggagcacgccaaa
cactatccggggtgtagttttctgctggcagagaaaggacaggagttcgtcagcagtgtt
cagttacaaggtcctgactggaacaatgctgcttcaagtcacctgaatggatgttcaagt
cacggaacagaggtgctgaggtcagccatggcccagagggcggtagagatgggtctggag
cctgccctggtagagaggactatactggagaggatacgcagggctgggacaggctactcc
accctggagactctgctgcaggactgctttaacagaggccctgacagcgacgcagagacc
gcagagaaccatgatgaggatccctttgagaagctacggaagctgcagagggagaaacag
tgcaaagtgtgtatggacagagacatctgcatggtcttcatcccctgtgggcacctggtc
gtctgcaaggagtgttccgaggccctcggcaagtgtcccatctgctgtgcagccatcaca
caaaagatcaagacatacatctcctaa
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