KEGG   Salvelinus fontinalis (brook trout): 129827474
Entry
129827474         CDS       T11136                                 
Name
(RefSeq) RING-box protein 1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
sfon  Salvelinus fontinalis (brook trout)
Pathway
sfon03420  Nucleotide excision repair
sfon04110  Cell cycle
sfon04114  Oocyte meiosis
sfon04120  Ubiquitin mediated proteolysis
sfon04141  Protein processing in endoplasmic reticulum
sfon04310  Wnt signaling pathway
sfon04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:sfon00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    129827474
   04120 Ubiquitin mediated proteolysis
    129827474
  09124 Replication and repair
   03420 Nucleotide excision repair
    129827474
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    129827474
   04350 TGF-beta signaling pathway
    129827474
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    129827474
   04114 Oocyte meiosis
    129827474
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:sfon04121]
    129827474
   03400 DNA repair and recombination proteins [BR:sfon03400]
    129827474
Enzymes [BR:sfon01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     129827474
Ubiquitin system [BR:sfon04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   129827474
  Multi subunit type E3
   SCF complex
    Ring finger protein
     129827474
   Cul2 complex
     129827474
   Cul3 complex
     129827474
   Cul4 complex
     129827474
   Cul7 complex
     129827474
   Cul8 complex
     129827474
   Cul9 complex
     129827474
DNA repair and recombination proteins [BR:sfon03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      129827474
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      129827474
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 129827474
NCBI-ProteinID: XP_055744342
LinkDB
Position
2:77731002..77734008
AA seq 108 aa
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctctcgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag

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