Salvelinus fontinalis (brook trout): 129827474
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Entry
129827474 CDS
T11136
Name
(RefSeq) RING-box protein 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03420
Nucleotide excision repair
sfon04110
Cell cycle
sfon04114
Oocyte meiosis
sfon04120
Ubiquitin mediated proteolysis
sfon04141
Protein processing in endoplasmic reticulum
sfon04310
Wnt signaling pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
129827474
04120 Ubiquitin mediated proteolysis
129827474
09124 Replication and repair
03420 Nucleotide excision repair
129827474
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
129827474
04350 TGF-beta signaling pathway
129827474
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
129827474
04114 Oocyte meiosis
129827474
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129827474
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129827474
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
129827474
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
129827474
Multi subunit type E3
SCF complex
Ring finger protein
129827474
Cul2 complex
129827474
Cul3 complex
129827474
Cul4 complex
129827474
Cul7 complex
129827474
Cul8 complex
129827474
Cul9 complex
129827474
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
129827474
TCR (transcription coupled repair) factors
Cul4-CSA complex
129827474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
129827474
NCBI-ProteinID:
XP_055744342
LinkDB
All DBs
Position
2:77731002..77734008
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSATNSGASKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgttgataccccaagcgccacgaatagtggagcaagcaagaaa
cgttttgaagtgaagaagtggaatgcagtggcactttgggcctgggacattgtggtggac
aactgtgccatctgtaggaatcacattatggatctctgcatagagtgccaggctaaccag
gcctctgccacatcagaggagtgcaccgtagcctggggagtctgcaatcatgcattccat
ttccactgtatctctcgttggttgaagaccaggcaggtgtgccccctagacaacagggag
tgggagtttcagaaatatggacactag
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