Salvelinus fontinalis (brook trout): 129827801
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Entry
129827801 CDS
T11136
Name
(RefSeq) platelet-derived growth factor receptor beta-like isoform X1
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
sfon04510
Focal adhesion
sfon04540
Gap junction
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129827801
04020 Calcium signaling pathway
129827801
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129827801
04540 Gap junction
129827801
09142 Cell motility
04810 Regulation of actin cytoskeleton
129827801
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfon01001
]
129827801
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfon04090
]
129827801
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129827801
Protein kinases [BR:
sfon01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129827801
CD molecules [BR:
sfon04090
]
Proteins
129827801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
VEGFR-1-like_Ig-like
Psg1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
129827801
NCBI-ProteinID:
XP_055744971
LinkDB
All DBs
Position
29:29372145..29424439
Genome browser
AA seq
1094 aa
AA seq
DB search
MRTVRVFTIHLTALITAILHFCPEYGCVEIYPSNSEVVMTPGDSMIFTCSSWGTVGWRFK
RNDDIPYFGVENQNTTSVLILDSVTWRHTGVYVCAEAWTDESREVAVFVPDPEVWFIESS
HGMVTKTSEEGTIPCVVTNPQINVTLYETDSDMHLKGVYIPSEGYRAALEDRTYVCRGEL
NGEEKESQAFYVLSIVVPETIDAYINASKTVLKQGEPLTVNCTVHGVELVFFSWDYPNRD
VDFIEPLTDILSSQSMRSCLTVSKATLANTGQYVCHVHESVQDQRATANVNITVLERGFV
ELRSVQERNVSAQLHQNVELRVEIESYPAPRVRWTKDNATVNGDNTVITRQEHETRYVSM
LTLVRIRTEQKGLYTVLVANGDDTKEVTFDLEVKVPPQITDLSDHHLPGKRHAVICVAEG
VPSPSIQFFSCDSMLKCSNRSTVWQPLVSDPETLSIQTNISFNESRKVGQVRSQVTFHKP
QQVIVRCEASNEGGVRRRDVKLVSSTLFSQVAVLAAVLPLVVILITSIIILIAVWRKKPR
YEIRWKVIESVSLDGHEYIYVDPIHLPYDLAWEMARDSLVLGRTLGSGAFGRVVEATAYG
LGHSQSSTKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKQGPLYLVT
EYCRYGDLVDYLHRNKHTFLQYYAEKNQEDSGCRVSGGSTPLSQRKGYVSFGSEFDGGYM
DMSKDEPTVYVPMQELKDTIKYTDIQPSPYESPYQHHLYQEQDQTTVDSALVISDCPTLS
YSDLIGFSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMHDSNYVS
KGSTFLPLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGAPYPDLPMNELFYSALKR
GYRMAKPNHATDEVYEVMQKCWDEKYERRPEFSFLVHTMGNMLTDSYKKRYCQVNDEFFK
RDHPAVVRTKPRLSSHFPTPALTPSTAPATPQDTNPYTLTGDFRPEADGEEASYNDYIIP
IPDPKPEEEVCSEADDIPMKSLASSRALEDEEADSISQETVEADTIPEEKYLHANQALIP
LESSGTPEAEDSFL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgtcagagtgttcactatccatctgacagccctaataacagctattttgcac
ttctgccctgagtacggttgcgtggagatctaccctagcaacagcgaggtcgtcatgaca
ccgggcgactccatgatcttcacctgttccagctgggggacagtcggatggaggttcaag
cggaatgacgacattccctattttggagtggagaaccagaacacaaccagtgttctcatt
ctggacagcgtgacgtggagacacacaggagtgtacgtctgtgccgaggcttggacggac
gagtctagagaggtggcagtctttgtgccggaccctgaagtgtggttcattgagagctcc
cacggcatggtgaccaagaccagcgaggaggggaccatcccctgtgtggtcaccaacccc
cagatcaacgtcaccctctacgagacggacagtgacatgcacctaaagggggtctacatc
cccagtgagggctacagggcagccctggaggacaggacctatgtgtgtcgtggggagctg
aacggggaggagaaagagtcccaggccttctacgtcttaagtattgttgtcccggagaca
atcgacgcctacatcaatgcgtctaagacggtgctgaagcagggcgagcctctgacagtg
aactgcacggtgcacggagtggagctggtcttcttctcctgggactaccccaacagagat
gtggacttcatcgagccattgaccgacatcctgtcgtcccagagcatgcgctcctgtctc
accgtctctaaggcgacgctggccaacacggggcagtacgtgtgtcacgttcacgagagt
gtccaggaccagagggccaccgccaacgtcaacatcaccgtcctcgagcgaggcttcgtg
gagctgaggtctgtccaggagcgtaacgtctcggcccagctgcaccagaacgtagagctg
agggttgagatcgagtcctaccccgctccacgtgttcgctggaccaaagacaacgccacc
gtcaacggagacaacaccgtcatcaccaggcaggagcacgagaccaggtacgtcagcatg
ttgaccttggtgaggatcaggacggaacagaagggactttacactgttctcgtcgccaac
ggagacgacaccaaggaagtgacatttgatctggaggtcaaagttccccctcagataaca
gacctgtcagaccaccacctcccagggaagaggcatgcagtgatctgtgtggctgagggg
gtcccctccccctccatacagtttttcagctgtgacagcatgctcaagtgcagtaaccgg
agcacagtgtggcagcccctggtgtcagaccctgagaccctgagtatccagaccaacatc
agtttcaatgagagccgtaaggtgggccaggtccgcagccaggtcaccttccacaagccc
cagcaggtgatcgtccgctgtgaggccagcaacgagggaggagtccgcaggagagacgtc
aaactggtgtccagcactctgttctcccaggtggcagtgttggctgcggttctacccctg
gtggtcatcctcatcacctccatcatcatcctcatcgctgtgtggaggaagaagcctcgc
tatgagattagatggaaggtgatagagtcggtgagtctggatggccatgagtacatctac
gtcgaccccatccacctgccctacgacctggcctgggagatggctcgagacagcctggtg
ctgggtcgtactcttgggtccggggcgtttggcagggtggtcgaggcgactgcatacggt
cttggtcattcccagtccagtacgaaagtggcggtgaaaatgctcaaatccacagccagg
aggagtgagacccaggctctgatgtcagagctgaagatcatgagccacctggggcctcac
ctcaacatcgtcaacctgctgggagcctgcaccaaacagggtcctctctacctggtgacg
gagtactgtcgctatggagacctggtggactacttacacaggaacaagcacacattcctg
cagtactacgctgagaagaaccaggaggactctggttgccgcgtctctggagggagcacc
cctctcagccagaggaaaggctacgtgtcgtttggcagtgagtttgacggtggctacatg
gacatgagtaaggacgagcccacggtgtacgtccccatgcaggagcttaaagacaccatc
aaatacactgacatccaaccttctccctatgagtcgccctaccagcaccacctttaccag
gaacaagaccagaccacagtggacagtgccctggtcatcagtgactgccctaccctcagc
tattctgacctcattggcttcagctaccaggtggccaagggcatggagttcctcgcctcc
aagaactgtgtccatcgtgacctggccgccaggaacgtgttgatctgtgaggggaagctg
gtgaagatctgtgactttggtctggccagagacatcatgcatgactccaactacgtctcc
aaaggcagcacgttccttcctcttaagtggatggccccagaaagtattttccataacctg
tacaccaccctgagtgatgtttggtcctatggcatcctgctctgggagatcttcaccctg
ggaggagccccctaccctgatctgcccatgaatgagctgttctacagtgccttaaagaga
ggatatcgcatggccaaacctaaccacgccaccgatgaagtttatgaagtcatgcagaag
tgctgggatgagaagtacgagaggaggccagagttctcttttctggtgcacacaatgggg
aacatgctcacagacagctataaaaagagatactgccaggtcaacgatgagttcttcaag
cgtgaccacccagccgtggtccgcaccaaacccaggctctcctctcacttccccacccca
gccctaaccccctccaccgcccctgccaccccccaggacaccaacccctacacgctcact
ggggacttcagaccggaggcagatggtgaggaagcttcctacaacgactacatcataccc
atcccggaccccaagcctgaggaggaagtctgctccgaggctgacgacattccaatgaaa
agcctcgcaagttctcgggctctggaggacgaggaggctgattccatctcccaggagacc
gtggaggcagacaccattccagaggagaaatatctccatgccaaccaggccctgattcca
ctggagtcctctggaacaccggaagcggaagacagcttcctgtag
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