Salvelinus fontinalis (brook trout): 129834256
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Entry
129834256 CDS
T11136
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03320
PPAR signaling pathway
sfon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129834256
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129834256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129834256
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129834256
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129834256
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
129834256
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Ortholog
Paralog
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
129834256
NCBI-ProteinID:
XP_055755064
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All DBs
Position
35:complement(3736524..3768630)
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AA seq
439 aa
AA seq
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MKHEGNLLPLELPHHAGFSSPPQKGPSSLAEKSSPLLMEPSNIKADPAGDMPANTEGQPV
KRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEM
DMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVV
PLAPEQLEMIEKLVAMQKQCNKRSFIDRPKVTPWPQSQDPQNREARQQRFAHFTELAIMS
VQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKE
DFAKAGLQLEFINPIFEFSKGMNDLHLDEAEYALLIAINIFSAGQRSSGMLVWNRAHMQD
RPNVQDHELVERLQQPYVDALRSYIMIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVFAL
RLQDKKLPPLLSEIWDVHE
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatgagggcaacctcctccccctggaactaccccaccatgcagggttttccagc
cccccccagaaagggccttcctcactagctgagaagagcagcccgctgctcatggagccc
agcaacatcaaggccgaccccgccggcgacatgcctgccaacacagagggtcagccggtg
aagaggaagaagggtccagcacccaagatgctgggtaacgaggtgtgcagcgtgtgcggg
gacaaagcctcgggcttccactacaacgtgctgagctgcgagggctgcaagggcttcttc
cgccgcagcgtcatcaagagcgcccagtactcgtgcaagaacaacggccgctgtgagatg
gacatgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgcgaggcgggc
atgctggagcaatgcgttctctcagaggagcagatccgagtgaagaaaatgaagaagaac
gaggaagagactgcacgcacgtctgccgtggtgacccccaccccggtgccggaggtggtc
ccgctggcgcccgagcagttggagatgatcgagaagctggtggccatgcagaagcagtgc
aacaagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccc
cagaacagggaggcgcggcagcagcgctttgcccacttcaccgagctggccatcatgtcg
gtccaggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagag
gaccagattgccctgctgaagacctcaaccattgagatcatgctgctggaaacttcgcgg
agatataaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggag
gattttgccaaagcagggctgcagttagagtttatcaaccccatctttgagttctccaag
ggcatgaacgacctgcacctggacgaggcggagtacgctctgctcatcgccatcaacatc
ttctctgcaggtcagaggtcaagtggtatgctagtgtggaacagagcccatatgcaagac
cggcccaatgtgcaggaccatgaactggtggagcgactgcagcagccgtacgtggacgca
cttcgttcttacatcatgataaagagaccaaacgatcacctgatgtttccacgcatgctc
atgaagctggtcagcctccgcaccctcagcagcgtccactctgagcaggtcttcgcccta
cgcctccaggacaagaagctcccgccgctgttatctgaaatctgggacgtccacgagtaa
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