Salvelinus fontinalis (brook trout): 129835292
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Entry
129835292 CDS
T11136
Name
(RefSeq) nectin-4-like
KO
K06593
poliovirus receptor-related 4
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
sfon04517
IgSF CAM signaling
sfon04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
129835292
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129835292
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
129835292
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sfon04515
]
129835292
Cell adhesion molecules [BR:
sfon04515
]
Immunoglobulin superfamily
Nectin family
129835292
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
V-set
ig
Ig_2
C2-set_2
TMEM154
Protocadherin
Tcell_CD4_C
DUF7237
EphA2_TM
DUF5305
LST1
C1orf162
Motif
Other DBs
NCBI-GeneID:
129835292
NCBI-ProteinID:
XP_055756848
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All DBs
Position
36:complement(16032201..16055053)
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AA seq
632 aa
AA seq
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MTSHLGGLTPLLWILWSFIAVVQGDFVEPSPSCSLNSLAEAETQLPCQFKVEVGQVVVQV
TWTKEKVDGTKDQIITVHHTDGHTEFGQYSGRVRFRSKKPTVDSSLIIMNTVESDEGRYN
CHISTFPSGNFERQLSLTVWTTPISSLDPVILVEGQSFQLAASCRSVARPPPHLSWDTDL
TGQSHNRSLEGGSVSTHFSLHPLRSMDGKRLDCLVQHPALKGPRRITNNLVVHYPPNAEI
SGFDQNWYAGLEEAALSCVSGGNPKPQSFNWTRKDGDLPEGVTTENESLLFNRPLVLTDA
GIYQCVAMNSVGAGNAEVDITVTELPQKQASFDSLLMVIVGGVAGVLLLVMIIIVISVTR
HHKRKNKKLSRELTVRKEEISTLSRQASFRKMNSVSMDTTRGQTEENIPLRVEGTLRTSL
SSVVEQGRIRESRSTLVGGGGLDYLGRPVLYNSSRRGRESRAMDREEENRLRVESNEQNS
TMSLANHLHPPLQPSSFPAEQSIELLRSLNGSAIIPTEWGLHIRQGPGSRNTHSPLSCNN
PPITDNDEEEDEGVEGEWETCPRMSPLDQGKSEDQDSKTNSSQISEVECGLNPHFQQNNG
TLRPKPLPKYRPNGILLTSSPHTSFIHKAQIV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacctctcacctgggcggactgacaccactgctgtggatcctttggagtttcatcgct
gtggtgcagggggactttgtggagccctctccctcgtgctccttgaactccctggctgag
gctgagacccagctgccctgccagttcaaggtggaagtgggccaggtggtggttcaggtc
acctggaccaaggagaaagtagatggtaccaaggaccagatcatcacagtgcaccacacc
gacggacacacagagtttggtcagtactcagggcgtgtgcggttcaggagcaagaaaccc
accgtggactcatccctgatcatcatgaacactgtggagtcagatgagggcaggtacaac
tgtcacatcagcaccttcccctcggggaacttcgaacgacagctgtcactcaccgtgtgg
accacgcccatctcctccctggaccctgtgatccttgtcgaaggccagtccttccaattg
gctgcgtcctgccgctctgtggcccgccctccgccccacctctcctgggacacagaccta
acaggccaatcacacaacaggagtttggagggtggttcagtctccacccacttctcgctg
catcccctgaggagtatggatgggaagcggctggactgtctggtgcagcacccggctctg
aagggaccacgcaggatcaccaacaacctggtggtgcactatcctcccaatgcagagatc
tctgggtttgatcagaactggtatgctggtctggaggaagctgccctcagttgtgtcagt
ggaggaaaccccaaaccacagagtttcaattggaccagaaaggacggagacttaccagag
ggcgtgaccacagagaatgaatccttgctgtttaataggcccctcgtcctgacggacgct
ggcatctaccaatgtgtggccatgaactctgtgggggcgggtaacgcagaggtggatatc
actgtgacagagttgcctcagaagcaggcgtcgttcgacagtctcctgatggtaatagtg
ggaggagtggccggagtactgcttctagtcatgatcatcatagtcatctctgtgacccgt
caccacaaacgcaagaacaagaaactgtcgagggaactcactgtgaggaaggaggagatc
agtactctctccagacaggcatctttcaggaaaatgaactcagtcagtatggacactact
agaggacagacagaggagaatatccctctcagagtggaggggacactgcggaccagtctg
tcctccgtagtggaacaagggcgcattagggagagtcgatctactctggtagggggcggg
gggctagactacctgggtcgacctgttctgtacaattcttcacgacgagggagggagagc
agagccatggacagagaggaggagaacagacttagggtggagtcaaatgagcagaatagc
accatgtctttggcaaaccatctccacccccctctccaaccctcttccttcccagcggaa
cagtccatcgagctgctgaggtccctgaacggcagtgccatcatcccaacggagtggggt
ttacatatacgtcaggggcccggtagcaggaacacccactcccctctcagttgcaacaac
cctcccatcacagacaacgatgaggaggaggatgaaggtgtggagggggagtgggagact
tgccccaggatgagtccgttggatcaggggaagtcagaagaccaggacagcaagaccaac
agttctcagatctcagaagtagaatgtggactcaaccctcacttccagcagaacaatgga
acgttgagacccaaaccgctccccaagtaccggcccaatggcatcctcctcacctcatca
ccacacacctccttcatccacaaggcccagattgtatag
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