Salvelinus fontinalis (brook trout): 129836298
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Entry
129836298 CDS
T11136
Symbol
ltbp1
Name
(RefSeq) latent-transforming growth factor beta-binding protein 1 isoform X1
KO
K19559
latent transforming growth factor beta binding protein 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
129836298 (ltbp1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
129836298 (ltbp1)
Domain-containing proteins not elsewhere classified [BR:
sfon04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
129836298 (ltbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
TB
EGF
EGF_3
hEGF
FXa_inhibition
Plasmod_Pvs28
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
129836298
NCBI-ProteinID:
XP_055758244
LinkDB
All DBs
Position
37:18498477..18632515
Genome browser
AA seq
1756 aa
AA seq
DB search
MAWIRWDLLFSIGLFMSPAFVSTDQSGFRRYYVLQPGPSGTDRVHVSSISSRSSATGQPH
AYNVELTASYGSQVRTRRMGNQANPIPLRQDTQFTQHQQVIRQTSHNVHQSHQMKISGVN
VCGGQCCHGWSKASGSQRCTKPNCLPQCQNGGMCLRPQLCVCKPGFNGKACEQRTMPTSS
IPAQPGNGHTNGHTNGRSIVPQRPIPQQGYAPVPVSNMAQMTLTVKQSPHLVRPQQSRPG
SQQFIRKPKYYNTHTTHSQTHVQHQPDRPIPLTVEHNPIHVGNHTGRIKVVFTPTICKVT
CTGGRCQNNCELGNTTTIVSENGHAADTLTAPNFRVVVCHLPCMNGGKCSARDKCQCPST
YTGKFCQMPVQNGNGQQRQKGQQQTSQIHSTHTLPLTFSNGQNPVKYAPSIVNIHVKHPP
EASVQIHQVSQLDANGQKVKGNGQNGQSQTQSHYTYHHSDSRQKIQQQGHNIIYSNQQSY
VPQYQPVSSKSQLGRCFQETTGTQCGKVLPGLSKQEECCQSIGTSWGFHKCQKCPKPSIP
LTAGGSRQAMDCPQGYKRINNSHCQDLNECQLQGVCPNGDCLNTMGSYRCSCKVGYIPDP
TLSTCIPDTSAVHEEKGACFRLVSSGKQCLHPVSAQLSKQLCCCSVGKAWGPRCDKCPLP
GTAKFKEICPGGMGYTVTGSYKPKPPNQLPSQPETINKPMITHQEPVAPPLPLPTHEKPV
EALSVAERQLPSVPVATDAPEQELVILEATSSSPIVEVEAGQPQLSPGVSTMRMEPAYKE
VVEETSPPAPALILPTNAGQDIAPTQSAEVDECKVNPHICGQGICYNTAEGYTCICNEGY
QMDETHTTCVDVNECLDSASLCSNGRCKNTPGSFLCVCQPGFMTDEEGTSCIDLNECLNT
HTCPEDEFCVNTVGSYTCLHCDSGYRMSPTGQCEDINECLDLGVCPSGLCINFPGSYECD
LCPKGFQGQGGQCVDVDECLDPSTCANGRCSNFEGYFVCLCNDGFTLSSDGQSCEDVDEC
LDPSTCANGRCSNFEGYFVCLCNDGFTLSSDGQSCEDVDECQDEQVCTRGHCQNTEGSFL
CNCGPGFMASAAGDQCDDVDECQKLTMPCDRVGHCVNNMGSYHCSCPQGYQQINGTSCLD
VDECLDDPELCSPHGECLNAEGSFYCVCERGFAAGQDKHTCEDVDECSDGTRCVGGSCEN
SQGSYRCLCDTGYRLQPDTDTCLDIDECSELGRSICGAWQCENMEGSYRCVVDCPPGHNH
GPEGICMDIDECNVNAMACGSHGFCENMVGSFRCLCDRGYQESQEGLGCVDVNECDLLSG
VCGEALCENVEGSFLCICRDEDQEYNQMTAKCSPAPTASSVERKECYYNLSDENLCENVL
TSSVTMEECCCTLGAGWGDNCEVHPCPVQGTDQFSQMCPAGRGSVPTGDTVFGVTAAESY
KDADECALFGQEICKDGFCFNSPGSYECYCKNGLYYDEVKLQCRDIDECQEESSCVEGEC
LNTQGSYMCFCTHPLVLDSDNKSCVIASEAAEQHGEQTGYQGVCWQTVTDTLTDTLTCTK
PLANRKTTYTECCCLFGEAWGMDCTLCPLKNTEDYASMCNVAMSGGQGHPYGRDALVAGP
VQEYEVSLDYEPHPDQPGALPLYEDEENLSDAFEGLRAEECGILNGCENGRCVRVQEGYT
CDCLDGYTLDMSRMACVDVNECSELNNRMSLCKNSKCINTQGSYKCVCLPGYTPSERPNY
CVAREQGEAAVATERE
NT seq
5271 nt
NT seq
+upstream
nt +downstream
nt
atggcttggatcagatgggacctcttgttttctataggtttattcatgtcaccagcattt
gtgtccacggatcagagtggctttaggagatactacgtgttgcagccaggtccgagcggg
acggacagggtacatgtgagttccatttcttcgcgctccagtgccacaggacagccccat
gcctacaatgtggagctcacggccagttatggtagccaggtccgaacccggaggatgggt
aaccaagcgaacccgatcccgcttcgccaggatacacagtttactcagcaccagcaagtc
attcggcagaccagccacaacgttcaccaaagtcaccaaatgaaaatttcaggggtgaat
gtctgtggagggcagtgctgtcacggatggagtaaggcctctggatcgcagcggtgcacc
aagcccaactgcctgccccagtgccagaatggaggaatgtgtctgaggccccagctctgt
gtctgcaagccgggcttcaatggcaaggcatgtgaacagaggaccatgcccacctcctcc
atcccagcgcagccagggaacggccacaccaatggacacaccaatggccgtagcatagtg
ccccagaggcccattccccagcagggctatgccccagtccctgtcagcaacatggctcag
atgaccctgaccgtcaagcagtcccctcaccttgtccggccccagcaaagccgacctggt
agccagcagtttatccggaagcccaagtactacaacacacacaccacacactcccagacg
cacgtccaacaccagcctgacagacccattcccctgacggtggaacacaaccccatccat
gtggggaaccacacaggccggatcaaggtggtcttcacgcccaccatctgcaaggtgacc
tgcacggggggccggtgccagaacaactgtgagctgggcaacaccaccaccatcgtcagt
gagaacggccatgccgcagacaccctcaccgcccccaacttcagagtagtggtatgccat
ctgccctgcatgaatggaggaaagtgcagtgccagggacaagtgtcagtgcccatctacc
tatacggggaagttctgccagatgcctgttcagaatgggaatgggcagcagcgccagaaa
gggcagcagcagacatctcagattcactccactcacactctgcccctcaccttcagcaat
ggacagaaccctgtgaaatatgcccccagcatcgtgaacatccatgtgaagcaccctccg
gaggcctcggtgcagatccaccaggtctcccagctggatgccaatgggcagaaggtgaaa
ggcaatgggcagaatggccaatcccagacccagtctcactacacctaccaccactcagac
agcagacagaagatccagcagcagggacacaacatcatctactccaaccagcagagctac
gtcccccagtaccagcccgtctcctccaagagccagctgggacgctgcttccaggagacc
accggcacacagtgtggcaaggtcctccctggtctcagcaagcaggaagaatgctgtcag
agcatcggaacatcctgggggttccacaaatgccagaagtgcccaaaaccatctattcct
ctgacagcaggaggatccagacaggcgatggactgcccccagggatacaagcgcatcaac
aactctcactgccaagatcttaatgagtgccagctgcagggtgtgtgtcccaacggagac
tgtctgaacaccatgggtagctacaggtgcagctgtaaggtcggctatatccctgacccc
accctctccacctgtatccccgacacctctgccgtccacgaggagaaaggggcttgtttc
cgattggtcagttcggggaagcagtgtttgcacccggtgtctgctcagctgagcaaacag
ctctgctgctgcagtgtgggcaaggcctggggcccgcgctgcgacaagtgccccctacca
ggaacagctaaattcaaggagatatgccctggtgggatgggctacactgtcacgggatct
tacaagcccaaaccacccaatcaattacccagccaacctgagaccatcaacaagccaatg
atcacccaccaagagcctgtggccccgcctctgcccctgccgacacatgagaaaccagtg
gaggccttgagcgtcgctgagagacagcttccctctgtaccagtagccacagatgcacct
gagcaggagctggttattctggaggctactagtagtagtccaatagttgaggtcgaggct
ggccagccacaactctctcccggtgtctctaccatgaggatggagccggcctacaaagag
gttgtggaggaaacgtccccccctgctccagccctgatcctccccaccaacgctggccag
gacatcgcccctactcagtcagcagaggtggatgagtgcaaggtgaaccctcacatctgt
ggccaggggatctgctacaacactgccgagggctatacctgcatctgtaacgagggctac
cagatggacgagacacacaccacctgtgtagatgttaatgaatgcctggattctgcatca
ctgtgctccaacggccgctgcaagaacactcccggcagcttcctgtgtgtttgccaacca
ggcttcatgacagatgaggagggaaccagttgcattgatttaaacgagtgtctgaacacc
cacacgtgtcctgaggatgagttttgtgtcaacaccgtgggttcctacacctgtttgcac
tgtgacagtggctacaggatgagcccaacaggccagtgtgaagatataaatgagtgtctg
gacttgggtgtgtgtccgtccggcctgtgcatcaacttcccaggctcgtatgagtgtgat
ctgtgtccaaagggcttccagggccagggaggacagtgtgtcgacgtagacgaatgcctg
gacccgtcaacttgtgccaacgggaggtgctccaactttgagggatactttgtctgcttg
tgtaacgatggattcacgctcagctcagatggacagtcatgcgaagacgtagacgaatgc
ctggacccgtcaacttgtgccaacgggaggtgctccaactttgagggatactttgtctgc
ttgtgtaacgatggattcacgctcagctcagatggacagtcatgcgaagatgtggatgag
tgccaggatgagcaggtgtgtaccagggggcactgccaaaacactgagggctctttcctc
tgtaactgtgggcctggtttcatggcttctgcggcaggggaccagtgtgacgatgtggat
gagtgccagaagctgaccatgccctgtgacagggtgggccactgtgtcaacaacatgggc
tcctaccactgcagctgcccccagggctaccagcagatcaacggcaccagctgcctagat
gttgacgagtgtctggacgacccggagctgtgttccccacacggggagtgtctcaacgct
gagggctccttctactgcgtctgtgagagaggcttcgctgccggccaggacaaacacacc
tgtgaagacgtggatgagtgctcagatggcaccaggtgtgttggcggttcctgtgagaac
agccagggttcctacagatgcctgtgtgacactggctaccgcctgcagccagacactgac
acatgcctggatatcgacgagtgttcagagttggggcggagcatctgtggggcgtggcag
tgtgagaacatggagggctcctataggtgtgtggtggactgcccccctggacacaaccat
ggcccagagggcatctgtatggacattgatgagtgcaacgtcaacgccatggcgtgtggc
agccacggcttctgtgagaacatggtcggatccttccgctgcctgtgtgaccggggctac
caggagtcccaggagggcctcggctgtgtggatgtcaacgagtgtgatctgctgagcggt
gtgtgtggcgaggccttgtgtgagaacgtggagggctccttcctgtgtatatgccgcgat
gaggaccaggagtacaaccagatgaccgccaagtgtagtcctgctcccacagcctcgtca
gtggagaggaaggagtgctattacaacctcagcgatgagaatctgtgtgagaacgtgctg
accagcagtgtcaccatggaggagtgctgctgtacgctgggggcaggctggggggacaac
tgtgaggtgcacccctgccccgtccagggcactgatcagttttcccagatgtgtccagct
gggagaggcagtgtcccaaccggtgacactgtgtttggagtgaccgcagccgagagttat
aaagatgcagatgagtgtgcgttgtttggccaggagatctgtaaggatggcttctgcttc
aacagcccaggaagctacgagtgttactgtaagaatggcctgtactacgacgaggtcaag
ttgcagtgcagagatattgatgagtgtcaggaggagtctagctgtgtggagggagagtgt
ttgaacacacagggctcctacatgtgtttctgtacacacccgctggtgttggactctgac
aacaagagctgtgtgatcgcctctgaagcggcagagcaacatggtgagcagactggctac
cagggtgtttgctggcagacggtgacagacactctgacagacactctgacctgcaccaag
ccccttgccaacagaaagaccacatacacagagtgctgctgtctgtttggagaggcctgg
ggcatggactgtaccctctgccccctcaagaacacagaggactatgcctccatgtgtaac
gtggcaatgagtggaggacaggggcatccgtatggtcgcgatgccctcgtggccggccct
gtccaggagtacgaggtcagcctggactacgagcctcaccccgaccagcctggtgccctg
cccctgtacgaggacgaggagaacctgtccgatgcgtttgagggcctgagagcggaagag
tgtggcattctgaacggctgtgagaacgggcgctgcgtgcgggtacaggaaggctacacc
tgcgactgcctcgacggatacaccctggacatgtcccgcatggcgtgtgtggatgtgaat
gagtgttctgagctcaacaaccggatgtccctctgcaagaactccaaatgtatcaacacg
caaggatcctacaagtgtgtgtgcctgccaggatacaccccatctgagcggcctaactac
tgtgtggccagggaacagggggaggcagcagtggccacagagagggagtga
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