Salvelinus fontinalis (brook trout): 129839679
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Entry
129839679 CDS
T11136
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
129839679 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sfon03400
]
129839679 (nthl1)
Enzymes [BR:
sfon01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
129839679 (nthl1)
DNA repair and recombination proteins [BR:
sfon03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
129839679 (nthl1)
Prokaryotic type
129839679 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
129839679
NCBI-ProteinID:
XP_055763212
LinkDB
All DBs
Position
40:731605..739055
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AA seq
427 aa
AA seq
DB search
MLLATVRPTCNTTVSCAFHCFKMTSPYFVESTAVFTRGGNKTVPHTGLATTLKTRMERRV
LRAHVKQEEEDSSVSNQSLGRDASDIGSSRFHRSSIGQSKAEPDKARSLLPLAPILRRRR
GQVKVEYDGKVEPKHWEPPDWSKQLCHVRQMRSARDAPVDLMGAEKCYDRHAPDEVRRYQ
VLVSLMLSSQTRDQVTSAALQRLRAHGCTVDNIVNTDDDTLGQLIYPVGFWRTKVKYLKQ
TSVMLQREFRGDIPNTVEGLVRLPGVGPKMAHLAMDIAWHQVSGIGVDTHVHRISNRLGW
TRGGTKNPEETRKALEDWLPRDLWSEINWLLVGFGQQVCLPVNPLCSVCLNQHSCPSAHQ
ASPAKRPKAGSPRSPHSSKTSRVKLEPGLGLPPPSSATMVKEEPLATTLSPPLLPRKRKS
KAKTFST
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgttattagccacggtccgtcccacttgcaacacaacggtctcctgtgctttccactgt
ttcaaaatgacctcgccttatttcgttgagagtaccgcggtattcactcggggcggtaac
aagaccgtaccccataccggtttagccacgacgttaaaaactaggatggagaggagagtg
ttgagggcgcacgtgaaacaggaggaagaagattcgagcgtatcaaatcagagtttggga
cgagacgcttcagatattggctcctctaggttccatcgctcatccatcggccaatcaaaa
gctgagccagacaaagcccggtccctgttaccactggcacccatcttgcgtaggaggagg
ggccaggtgaaggtggaatatgatgggaaggtggagcctaaacactgggagcctcctgat
tggagcaagcagctgtgtcatgtgcgtcagatgaggagcgccagggatgcgcctgttgac
ctcatgggggcggagaaatgctacgacagacacgcccctgatgaggtgcgacgttaccag
gtgctggtgtctctgatgttgtcaagccagacaagggaccaggtgaccagtgcagctctg
cagagactcagggctcatggctgtacggtggacaacatagtcaacactgacgatgacaca
ctgggacaactcatctaccctgttggcttctggaggaccaaggtgaagtacctgaagcag
acgtcagtgatgctccagagggagtttagaggggacatccctaacacagtggagggcctg
gtacgactacctggagttggacccaagatggctcacctggccatggacatcgcctggcac
caggtctctggcataggcgtggacacgcacgtccaccgtatctccaaccggctgggatgg
acgagaggtgggaccaagaacccagaggagacacgcaaggccctggaagactggttacca
agggatctatggagtgagatcaactggttgctggtggggtttggtcaacaggtgtgtcta
cctgtcaatcctctctgctccgtgtgtctgaaccagcacagctgcccctccgcccaccaa
gcctccccagccaagaggcctaaagctgggtcacctcgctccccacactcctccaagacc
tccagggtcaagctggagcctggtttggggttaccacccccctcctctgccacaatggtc
aaagaggaacctctggctaccaccctctcccctcctctgctgcccagaaagaggaagtcc
aaagccaaaaccttctctacatga
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