Salvelinus fontinalis (brook trout): 129840860
Help
Entry
129840860 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase Itchy-like isoform X1
KO
K05632
E3 ubiquitin-protein ligase Itchy [EC:
2.3.2.26
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04120
Ubiquitin mediated proteolysis
sfon04144
Endocytosis
sfon04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
129840860
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
129840860
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
129840860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129840860
04121 Ubiquitin system [BR:
sfon04121
]
129840860
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
129840860
Membrane trafficking [BR:
sfon04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
129840860
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
HECT type E3
129840860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
SWI-SNF_Ssr4_C
Motif
Other DBs
NCBI-GeneID:
129840860
NCBI-ProteinID:
XP_055764904
LinkDB
All DBs
Position
3:complement(21334076..21403136)
Genome browser
AA seq
870 aa
AA seq
DB search
MKAQLQVTVLSAKLKENKKNWFGPSPYVEVAVDGQSKKTEKCNNTHNPKWKQSLTVILTP
FSKLIFRVWSHQTLKADILLGMATLEISETLKSNDMKLSEVVQTLQLCSDRDHTDVVGDL
SVCLDGMQVDPETFTSAERDHVAVPNGEVRQNGDSVNSDNIPPRSSRDTSPSSDSTEDWV
IVPNGHTVNSMGSPAPSPGGSKSTRPPRPARPPPPTPRRPAASPASSSSSTHSEVSEPPA
SYGSSLASASGASSDPPQENGAAPPQAASTPPAIGAPAGAPPAGGPPRVIPNGPLPPGWE
QRVDQNGRMYFVDHIEKRTTWDRPESLPSGWERRVDPMGRVYFVDHITRTTTWQRPTQES
VRNYEEWQHQRSQLQGAMQQFNQRFIFGLQDQQIAAANKEFDPLGPLPHGWEKRTDTNGR
VYFVHHTTRMTQWEDPRTQGLLNDKPLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTGK
SSLENGPQITYVRDFKAKVQYFRFWCQQLSMPQHIKITVTRKTLFEDSFQQMMSFHPQDL
RRRLWIIFPGEEGLDYGGVAREWFFLLSHEVLNPMYCLFEYAGKDNYCLQINPASYINPD
HLKYFKFIGRFIAMALFHGKFIDTGFSLPFYKRILNKPLALKDLESIDPEFYNSLIWIKD
NNLEECGLEMYFSVDKEILGEVTTHELKPDGGNVLVTEENKEEYIRLVAEWRLSRGVEEQ
TQAFFEGFNEVLPQQYLQYFDAKELEVMLCGMQEIDLVDWQRHTIYRHYARSSKQILWFW
QFVKEMDNEKRMRLLQFVTGTCRLPMGGFADLMGSNGPQKFCIEKVGKENWLPRSHTCFN
RLDLPPYKSYEQLKEKLMFAIEETEGFGQE
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcccaactacaagttactgtgctgtcggccaaactgaaggagaacaaaaagaac
tggtttggccccagtccgtacgtggaggtggctgtggacggtcagtcgaagaagaccgag
aaatgcaacaacacacacaaccccaaatggaagcagtcactgacagtaattctcacacct
ttcagtaagctcattttccgggtatggagtcatcagacgctgaaggccgacatcttattg
ggaatggctacattggagatcagtgaaaccctaaagtccaatgatatgaaactctctgag
gtggtgcagaccctgcagctgtgttcagaccgagaccacactgacgtggtgggggacctg
tcagtctgtctggacggcatgcaggtggacccagagacattcacctctgcagagagggac
catgttgctgttccaaacggggaggtgagacagaacggagatagtgtcaacagtgataat
ataccacccagatccagcagggacacgtccccctccagtgactccacagaggactgggtc
atcgtccccaacggccacacggtcaacagcatgggttctcctgccccatccccagggggc
tccaagtccacacggccccccagacctgcacggcctcccccacccaccccccgcagacca
gccgcttccccagcctcctccagcagctctacccatagcgaggtgagtgagcccccggct
tcatacggctcgtccctggcctcggccagcggggcctcctcagacccccctcaggagaac
ggagctgcacccccacaggcagccagcacccccccggctatcggggcaccagctggtgca
cccccagccggtgggcccccccgagtcatccctaacggcccactgcctccaggctgggag
cagagggtggaccagaatggccgcatgtatttcgtggatcacattgagaagagaacgaca
tgggaccgaccagagtctctcccctctggttgggagcggcgtgtggaccccatgggcagg
gtgtacttcgtggaccacatcacccggaccaccacgtggcagcgccccacgcaggagtct
gtgcgcaactatgaggagtggcagcaccagcgcagccagctgcagggggccatgcagcag
ttcaaccagaggttcatttttgggctccaggatcagcaaatagctgcagcaaacaaagag
tttgacccacttgggccgctgccacacggctgggagaagcgaacagacaccaacggcagg
gtttattttgttcaccacacaacgcggatgactcagtgggaggacccacggacacaaggg
ctgctgaatgacaagcccctacctgaaggctgggagatgaggttcacagtggatggcatc
ccctactttgtggaccacaaccggagaaccaccacctacatcgaccctcgcacgggcaaa
tcctcccttgagaacgggccccagatcacctacgtcagggacttcaaagccaaagtgcag
tacttcaggttctggtgtcagcaactgtcaatgccacagcacatcaagatcaccgtcacc
cgcaaaaccctgtttgaggattcattccagcaaatgatgagctttcatccacaagatctc
aggcggagactgtggataattttccccggagaggaaggcttggactacggaggagtggca
agggagtggttcttcttgctatcccacgaggtgctgaacccaatgtactgcctgtttgag
tatgccggcaaggacaactactgtctccagatcaaccctgcctcctacatcaaccccgac
cacctcaagtacttcaagttcattggacgattcattgccatggccttgttccatgggaag
ttcatcgacactggattctccctgcccttctacaagcgcatcctgaacaaacccctggcc
ctgaaggacctggaatccattgacccggaattctacaactccctcatctggatcaaagat
aacaacttggaggagtgtggtctggagatgtacttctctgtggacaaggagatcctgggg
gaggtcaccactcacgagctgaagccagacggaggcaatgtcttggtcactgaggaaaac
aaagaggaatacatcaggctggtggcagagtggaggttgtccagaggggtggaggagcag
acccaggccttcttcgagggctttaatgaggtcctcccccagcagtacctgcagtacttt
gacgccaaggaactggaggtgatgctgtgtggcatgcaggagatagacctggtggactgg
cagaggcacaccatctacaggcactacgcacgcagcagcaagcagatcctctggttctgg
cagtttgtgaaggagatggacaatgagaaacgtatgaggctgctgcagtttgtcaccggc
acctgtcggcttcccatgggcggcttcgctgacctcatggggagtaatggcccacagaag
ttctgcattgagaaggtgggcaaagaaaactggcttccaagaagtcacacttgctttaat
cgactggacctgcccccgtacaagagctacgagcagctgaaggaaaagctgatgtttgcc
attgaggaaactgagggcttcggacaggagtag
DBGET
integrated database retrieval system
