Salvelinus fontinalis (brook trout): 129841323
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Entry
129841323 CDS
T11136
Symbol
kdm2aa
Name
(RefSeq) lysine (K)-specific demethylase 2Aa isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129841323 (kdm2aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129841323 (kdm2aa)
04121 Ubiquitin system [BR:
sfon04121
]
129841323 (kdm2aa)
03036 Chromosome and associated proteins [BR:
sfon03036
]
129841323 (kdm2aa)
Enzymes [BR:
sfon01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129841323 (kdm2aa)
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129841323 (kdm2aa)
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129841323 (kdm2aa)
Chromosome and associated proteins [BR:
sfon03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129841323 (kdm2aa)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129841323 (kdm2aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
129841323
NCBI-ProteinID:
XP_055765515
LinkDB
All DBs
Position
42:22208334..22229719
Genome browser
AA seq
1396 aa
AA seq
DB search
MGGFAVAIHDQSSYPENVSQQCKPPGVKTQQKPGGRLAPSTVLEQVYSIMVRSGTRRRYH
DDGISDDEIEGKRTFDLEEKLTSERFTSDRVKRMEGKDLTFEYIQRGGLRDPIIFEKPDG
LGIKMPDPDFSVNDVKIFVGSRRMMDVMDVSTQKGIEMSMAQWRRYYETPPSQRDKLYNV
ISLEFSHTKLENLVQRPASVDIIDWVDNMWPRHLKERQRDSTNSITDMQYPKVQKYCLMS
VQGCYTDFHIDFGGSSVWYHILRGGKVFWLIPPTPQNLELYEDWVLSGKQGDIFLGDKAQ
DCQRIELKQGYTFMIPSGWIHAVYTPVDTLVFGGNFLHSFNIPMQLNIYSIEDRTRVPAK
FRYPFYYEMCWYVLERYLFSLTNTSYLTPDFQKHSLGIGLTRDPSTCESINGHTQEEDEE
GAPPTQGSKPGVKVHLTPFELEGLWNLLGKLESLPSQKNCVPAGIHDAPALLHDIRALLK
EHANDIPKLSYTGKPIVKWPKRPSWYQPPPPPPPVARPKLSATVVPPRPQKPASSMSVLR
RRRVRCKRCEACVRTECGDCNFCRDMKKFGGPGKLKQTCVLRQCLAPGLPLSVVCEICAE
GNQEGGEGPVFALTLMECSNCAQIAHPACLKVTGDGVVNTDLPSCWECPKCVLGITDTES
SGTDDDDSGASVGLGAGVSSLSATQGPLGVSMEPGSAPGLGDEGWGRAILLYPGLVPNPP
SSWFSEAPLPSPGQLLLEQHGLKRAGRWASGRRKRVKGDKNKMLHAKRKSSSYLDGRIAK
IYRRRGHSRDDDDDDDSGSDDDDDDDEGSRGGGGGTGQKMSGPRPRGSGSASRRGYGTGR
RGIWRGSSHRGAGRGSALSPHSSLKMRRGRGGLGAGRGDREGGRRERGGRVRLRGGTRMQ
RRRDESEEDDDDDDDDEEDDDSEEDRQHHHRQRRRRRRTDDDEEDDDEEDDDEEDSSARD
LEGEDEDVADEEDDENRSDSEPEPPVLLVSDLNDDLLNGSYLTVTLQRPPRAKRHPGSIV
PKLEAAMSPRTHGGGPGYVQHKTLGKTRHKNGTVAAGNGLAQPAKNPVGRPPRHRINNPP
GDTADRERERDTASHSSSDSSAPPPTPPPHSSHSPSSLLSLPSFKDVGNEKGGEKEVWVA
VFCYLSRAELASCMTVCKAWYKWSCDKRLWSGVDVSRCPSLSSQAVQGIIKRQPTSLDLS
WTPVSKRQITLLIHRLPGLKELMIAGCSWSSMSALSTPSLPCLRTLDLRWAEGVKDTQIR
DLVTPPGCDSRSRLRGCVALRLAGLDISDSTLRLILRHMPLLERLDLAHCRDLTDQSVCL
LTAAGTRNTLTEINLAGCNKLTDGCLAYLKRASGLALLDLRGCKGVTLRGCEGFISDLSH
CVLFCMTEEKLIQRIS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgggcggctttgctgtagcaatccatgaccaaagtagctacccagaaaacgtgtctcag
caatgcaaacctccgggagtcaagacacagcagaagccaggcggcagactggccccgtcg
accgtccttgaacaggtctactcaatcatggtgcggtcgggcacgcggcggcgctaccat
gacgatggtatctcggacgacgagatcgaggggaagaggacctttgacctggaggagaag
ctgacgagcgagaggttcacctcagacagggtcaaacgcatggaggggaaagacctcacg
tttgagtacatccaaagaggtgggttgagggacccgatcatctttgagaagccagacgga
ctgggcatcaagatgccagatccagacttcagtgtgaacgacgtcaagatatttgtcggc
agcaggcgtatgatggatgtgatggatgtcagtactcagaagggtatagagatgtctatg
gcccagtggagacgttactacgagacgcccccctcccagagggacaaactctacaacgtc
atcagcctggagtttagccacaccaagctggagaacctggtccagaggcctgcgtcggtg
gacatcatagactgggtggacaacatgtggcctcggcacctgaaggagagacagagagac
tccaccaactccatcacagacatgcagtaccccaaagtgcagaagtattgtctaatgagt
gtgcagggctgctacacggacttccacatagacttcggaggttcctcggtctggtaccac
atactgcgtggaggcaaggtgttctggctgatcccgcccacgcctcagaacctggagctg
tatgaggactgggtgttgtcagggaaacagggagacatcttcctgggagacaaggcccag
gactgtcagaggatagagctgaagcagggctataccttcatgatcccctcaggttggatc
catgcggtctacactccagtggacaccctggtgtttgggggaaacttcctccacagcttc
aacatccccatgcaactcaacatctacagcatcgaggacaggacacgggtaccagctaag
ttccgttacccgttctactatgagatgtgttggtacgtgttggagagatacctcttcagt
ctgaccaacacctcctacctcacgcctgacttccagaaacactccctgggcatcggtctt
accagagacccctccacctgtgagtcgatcaacgggcacacccaggaggaggatgaagag
ggtgctcccccgacccagggctctaagcccggggtgaaggttcacctcacgccctttgag
ctggaggggctgtggaacctgctggggaagctagagtctctgccctcacagaagaactgt
gtcccggcaggcatacacgatgctcccgctctgctgcacgacatcagggccctgctgaag
gagcatgctaatgacatccccaaactgtcctacactggcaagcccatcgtcaagtggccc
aagaggccgtcgtggtaccagccccctccccctcctcccccggtggctcgtcccaagctg
tctgccacggtggtgcccccgcgaccccagaagcccgcttcctccatgtccgtgctgcgg
cggcggcgtgtgcggtgtaagcgctgcgaggcgtgcgtcaggacggagtgcggggactgt
aacttctgcagggacatgaagaagttcggagggccggggaaactcaaacagacctgcgtg
ctccgacagtgtctggcgccgggtctgcccctgtcagtggtgtgtgagatctgtgcagag
gggaaccaggagggaggagaggggccagtctttgccctcaccctcatggagtgttccaac
tgtgcccagatagcccaccccgcctgcctgaaggtaacaggggatggtgtggtgaataca
gatctgcccagctgctgggagtgtcccaaatgtgttctgggaatcaccgacactgagtct
tcgggcaccgatgatgatgacagtggggcgtccgttggcctcggcgctggcgtgagctcc
ctctccgccacccaggggcctctaggggtctccatggagccaggctctgctcctgggttg
ggggacgagggctggggcagggcgatactgctatacccagggctggttcccaaccccccc
tcctcctggttctccgaggcgccccttccctcccctgggcagctactactagagcagcac
ggcctcaagcgggcggggagatgggcaagcgggcgcaggaagagggtgaagggggacaag
aataaaatgttacacgcgaaacgcaagtcttcttcgtatctcgacggtcgcatcgccaag
atctaccgtcgccgtggtcacagccgagacgacgacgacgacgacgactcgggcagtgat
gatgatgatgatgatgatgaaggctccaggggcggaggaggcggcacgggacagaagatg
tccgggccacgccctcgcggcagtggctccgcctctcggagaggttacgggactgggagg
cggggcatttggagaggctcctcccacagaggggcaggccgcggaagtgctctgtcccct
cactcctccctgaagatgaggcgcggcagaggagggctgggggcgggccgaggggataga
gagggggggcgtagggagaggggagggagagtgcgcctccggggaggcactaggatgcag
agacgcagggacgagtcagaggaggatgacgacgatgatgacgacgacgaggaagatgac
gacagtgaggaagatcggcagcatcaccaccggcaacgccgcaggcggaggagaacggat
gacgatgaggaagacgatgatgaggaagacgatgatgaggaagacagctcggcccgggac
ctggagggggaggatgaggacgtagccgatgaggaagacgacgagaaccggtcagactct
gaaccagagcctcccgtcctcctggtgtctgaccttaacgacgacctcctaaacggctcg
tacctgacagtgaccctacagcgcccccccagggccaaacgccaccccggctccatcgtg
cccaagctggaggccgccatgtctcccagaacccacggcggcggtccaggttacgtccag
cataaaaccctcgggaagacgcggcacaaaaacggcacggtcgccgccggcaacggcctg
gcccagcccgccaagaatccagtcggccggccgcctcgtcatcgtatcaacaatccacca
ggcgacacagcagacagggaaagagagagggacactgcctctcattcctcctctgactcc
tcggcccccccccccacccctcctccccactcctcccactctccttcctcgctcctgtcg
cttccctccttcaaggatgtaggaaacgagaaaggaggggagaaggaggtgtgggtggcg
gtgttctgttacctgagcagagccgagctggctagctgtatgactgtctgtaaggcctgg
tacaaatggagttgtgacaagcgtctgtggagtggtgtggatgtatcgcggtgtccctcc
ctctcctcccaggccgtgcagggcatcatcaaacgccagcccacctccctggacctttcc
tggacccccgtgtccaagagacagatcaccctgctcatacaccgcctgccaggtctgaag
gagttgatgatagcaggttgctcctggtcgtcaatgtcagccctgtccacccccagcctg
ccgtgcctccgtaccctggacctgcgctgggcagagggggtcaaagacacccagatcagg
gacctggtcacaccaccaggttgtgacagtcggtctcggctgcgtggctgtgtggcgctg
cgtctagccggcctggacatcagtgactccaccctgagactgattctccgtcacatgccc
ctgctagagaggctggacctggcccactgcagggacctcacggatcagtccgtctgcctg
ctcaccgccgccggcacacgcaacacgctcacagagatcaacctcgcaggctgtaacaag
ctgacggacggctgtctggcgtacctgaagagggcgtctggcctggcgctgctagacctg
cggggctgcaaaggtgtgacgctgcggggctgtgagggcttcatctcggacctctctcac
tgcgtcctgttctgtatgacggaggagaaactcatccagaggatatcctaa
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