Salvelinus fontinalis (brook trout): 129854116
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Entry
129854116 CDS
T11136
Name
(RefSeq) oxysterols receptor LXR-alpha-like isoform X1
KO
K08536
liver X receptor alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon03320
PPAR signaling pathway
sfon04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
129854116
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
129854116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sfon03000
]
129854116
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sfon03310
]
129854116
Transcription factors [BR:
sfon03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
129854116
Nuclear receptors [BR:
sfon03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
129854116
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
129854116
NCBI-ProteinID:
XP_055776818
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Position
4:complement(60647965..60671271)
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AA seq
467 aa
AA seq
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MSTLSATDITDVGHGEVFDGAPELQLDCLCSGDDRTSAEMKHEGNLLPLEPPDHVGFSSP
PQKGPSSLAEKSSPLPMEPSDIKADPADSMPANTEGQPVKRKKGPAPKMLGNEVCSVCGD
KASGFHYNVLSCEGCKGFFRRSVIKSAQYSCKNNGRCEMDMYMRRKCQQCRLRKCREAGM
LEQCVLSEEQIRVKKMKKNEEETARTSAVVTPTPVPEVVPLAPEQLEMIEKLVAMQKQCN
KRSFIDRPKVTPWPQSQDPQNREVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTRED
QIALLKTSTIEIMLLETSRRYNPAIESITFLKDFSYNKEDFAKAGLQLEFINPIFEFSKG
MNDLHLDEAEYALLIAINIFSAGQRSSDRPNVQDHELVERLQQPYVDALRSYIMIKRPND
HLMFPRMLMKLVSLRTLSSVHSEQVFALRLQDKKLPPLLSEIWDVHE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtccacactgtctgcgactgatatcacagatgttggtcatggtgaggtgtttgacggg
gccccagagctgcagctggactgcctctgcagtggtgacgaccgcaccagtgcagaaatg
aagcatgagggcaacctcctccccctggaaccacctgaccatgtagggttttccagcccc
ccccagaaagggccttcctcactagctgagaagagcagcccactgcccatggagcccagc
gacatcaaggccgaccccgccgacagcatgcctgccaatacagagggccagccggtgaag
aggaagaagggtccagcgcctaagatgctggggaacgaggtgtgcagcgtgtgcggggac
aaggcctcaggcttccactacaatgtgctgagctgcgagggctgcaagggcttcttccgc
cgcagcgtaatcaagagtgcccagtattcgtgcaagaacaacggccgctgtgagatggac
atgtacatgcgccgcaagtgccagcagtgccggctgcgcaagtgccgtgaagcgggcatg
ctggagcaatgcgttctctcagaggagcagatccgagtgaaaaagatgaagaagaacgaa
gaagagactgcacgcacgtctgcggtggtgacccccaccccggtgccggaggtggtcccg
ctggcgcccgagcagttggagatgatcgagaagctggtggccatgcagaagcagtgcaac
aagcgctcgttcatcgaccggcccaaagtcacgccgtggccccagagtcaggacccccag
aacagggaggtgcggcagcagcgctttgcccacttcactgagctggccatcatgtcggtc
caggagatagtggactttgccaagcagttgcctggcttcctagagctcaccagagaggac
cagattgccctgctgaagacctcaaccattgagatcatgctgctggagacatcgcggaga
tacaaccctgccattgagagcatcacgttcctgaaggacttcagttataacaaggaggat
tttgccaaagcagggctgcagttggagtttatcaaccccatctttgagttctccaagggc
atgaacgacctgcacctggacgaggcggagtatgctttgctcatcgccattaacatcttc
tctgcaggtcagaggtcaagtgaccggcccaatgtgcaggaccatgaactggtggagcga
ctgcagcaaccgtacgtggacgcacttcgttcttacatcatgataaagagaccaaacgat
cacctgatgtttccacgcatgctcatgaagctggtcagcctccgcaccctcagcagcgtc
cactctgagcaggttttcgccctgcgcctccaggacaagaagctcccgccgctgctatct
gaaatctgggacgtccacgagtga
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