Salvelinus fontinalis (brook trout): 129854465
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Entry
129854465 CDS
T11136
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 2-like isoform X1
KO
K10165
nucleotide-binding oligomerization domain-containing protein 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
129854465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sfon04054
]
129854465
Pattern recognition receptors [BR:
sfon04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
129854465
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_NLRC3
CARD
NLRC4_HD2
LRR_6
LRR_TMOD-LMOD
WHD_NOD2
LRR_CARMIL
AAA_16
nSTAND_NTPase5
AAA_29
AAA_22
AAA_30
T2SSE
Viral_helicase1
Sigma54_activat
nSTAND3
AAA_25
Motif
Other DBs
NCBI-GeneID:
129854465
NCBI-ProteinID:
XP_055777507
LinkDB
All DBs
Position
4:77754192..77761665
Genome browser
AA seq
1030 aa
AA seq
DB search
MSINYNPHNKSHFLLLQDYFPAVANWLKLRSYICMSARQLVLRQRAELLRALCCGGSSEG
LESVLDLLLSWGMLFWEDYQNVRVPGRALCANTRVLLDLVYTKGDETCQLLLAAFKRVLP
EAQRAGLSFGNCRTADLENTRDDTKELHGTAIQTLQTDRPGLVRRLKDQIEGALEVLLHT
GSFTPSDCDEVQLLVYTPSQQARRLLDQVRSKGEPAAKVLLQYFQQTEDHPSPFNQEAPP
KECLSYQKKLRSTVSAQSHFLSTYGGTSSLSLEDIYTEGQLELAQGGSEAQPQTGALGLE
DVVGLVGTLNQEADTVLVSGEAGSGKSTLLQRLHLLWARGAALHDFFLLFPFSCRRLSSE
QRELSLKELLFLHCCWPDGDQDRIFQFILDHPHLILFTFDGLDEFMQSFSDSEQRHCCPT
QCAPVPTLLFNLLQGSLMKGVRKVVTSRPEAVGPTLKRYLRKEVLLKGFSPGGIDCFVRK
YLRDPTVATRVLESLRSNTALLGLCHIPVFCWIVSKCYKELLGCGEGEGSPQTITDVYLM
ILQHFFQCRASQRNTMGIGWVQEHQDTALHLGQLAMEGLGASCYVFTGTELQKCGVTEKD
ICMGFLIRSEDLSSSTNCKHYEFLHITMQCFFAALYVVLNNNLDRSTIPKLFQPQDRQQQ
PGFHRVCLGHCLTQQEGALKEANTAAETPNLQITATFVSGLLSQRHRSLLLLSCPGPTLD
RKSKQVVTCLSKGMQKHFKSIPRPVEGEKKSMHAMPGFVWLIKCIHEMQDSRIARDTMAK
LEVEHLKLTYCNIGPVECTALAYVLQHLRNPVGLQLDYNYVGDVGVEQLLPCLHVCHSVY
LRHNNISDKGIRKLIEKGIQCERFQKIALFNNKLTDACTECFAHLLKTKQNFLSLRLGNN
NITAAGAGQLAEGLRFNRSLQFLGLWGNKIGDKGAEAIANALKDSQTLVWLSLVDNGVGS
AGACALAPLIKNSTLEELWLTKNCITRTGVECLILALEGNTSVKAVWLRGNELSPEEVEE
MTQREPRLTF
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgtccattaattataatccacataataaatcacatttcctgttgctgcaagattatttt
cctgctgtagcaaactggctcaaattaagatcctacatctgtatgagtgcccggcagctg
gtcctgaggcagagagcagagctgctgcgtgccctgtgctgtggtggctcttctgagggt
ctggagagtgtattggacctactcctgtcctggggaatgctgttctgggaggactaccag
aatgtacgggtaccaggccgtgctctgtgtgccaacacaagggtgctactagatcttgtg
tacaccaagggagatgagacctgtcaactgctcctggctgctttcaaacgggtcctccct
gaggcccaaagagctggcctctcttttggaaactgtcgtactgccgatctagaaaataca
agagatgatacaaaagaactacatggtacagctatccagaccctccagacagacaggcct
ggtctggtgaggaggctaaaggaccaaattgaaggagctctggaggtcctgctgcataca
ggcagctttacaccatctgattgcgatgaagtgcagctacttgtgtacaccccctcacaa
caggcaaggcgtctactggaccaggtcagatcaaagggggagcctgcagcaaaggtccta
ctgcaatactttcagcaaacagaggaccatccctcaccatttaaccaagaggctcctccc
aaagagtgcttgtcctatcagaagaagctgcgcagcactgtgtcggcccagtcacatttc
ctcagcacgtatggaggaaccagcagtctgtctctagaagacatctacacagagggtcag
ctggagcttgcccagggtggcagtgaggcccagccccagactggtgctctggggctggag
gacgtggtgggcctggtgggcaccctgaaccaggaggctgacactgtgctagtctctggg
gaggcaggcagtgggaagagcacccttctccagaggctgcacctcctctgggccaggggg
gcggctctacatgatttcttcctcctctttcccttcagctgccgcaggctgagctcggag
cagagggagctgtctctcaaagagctgctgttcctgcactgctgctggccggacggggac
caggaccgaatcttccagttcatcctggaccatccgcacctcatcctcttcaccttcgac
ggcctggacgagtttatgcagagcttctcagactcagagcagaggcactgctgccccacc
cagtgtgccccagtccccaccctgctcttcaacttgctgcagggatccctcatgaagggg
gtgaggaaggtggtgaccagccggccagaggcagtgggtcccaccctgaagaggtacctt
cgcaaggaagtcctcttgaaaggcttctcgccaggcgggatcgactgcttcgtgaggaag
tatcttcgcgacccgacggtggccaccagggtcctggagtctctacgaagcaacacagct
ctactgggcctgtgtcacatcccggttttctgctggattgtgtctaagtgttataaggag
ctgctgggctgtggagagggagagggcagtccccagaccatcacagatgtttacctcatg
atcctgcagcacttcttccagtgccgggcctctcagaggaacaccatggggatagggtgg
gtgcaggagcaccaggatactgccttgcatctggggcagctagccatggagggcctgggg
gcctcttgttatgtcttcacaggcacagagctacagaagtgtggggtgaccgagaaagat
atctgcatggggttcctcatccgtagtgaagacctctcctcctctactaactgcaaacac
tacgagttcctgcacattaccatgcagtgcttctttgctgctctctacgttgtcctgaac
aataacttggaccgctccaccatccctaagctttttcagccgcaggacaggcagcaacag
cctggctttcacagggtgtgtctgggccactgcttgacccaacaagaaggggccttgaag
gaggccaatacggcagcagagacccccaacctccagataacagccacttttgtgtctggg
ctcttgtctcagcgccaccgcagcctgctgctcctctcctgccctgggcccactctggac
aggaagtccaagcaggtggtgacgtgcctgtccaaaggcatgcagaagcactttaaatcc
atccctcggcccgtggagggggagaagaagagcatgcacgccatgccgggcttcgtgtgg
ctcatcaagtgcatccatgagatgcaggacagtaggatcgccagagacactatggctaag
ctagaggtggaacacctgaagctgacctattgtaacataggccctgtggagtgtactgcg
ctggcctacgtgctccagcaccttaggaaccctgtggggcttcagctagactacaactac
gtaggagacgttggggtggagcagcttctgccttgcctgcatgtctgccactctgtatac
ctgagacacaataacatatcagataagggaatccgtaaattgattgaaaaaggcatccag
tgtgagcgctttcagaagattgcgctcttcaacaacaagctaactgatgcctgcacagag
tgcttcgctcacctcctgaagacgaaacagaattttctctctctaaggctgggaaacaat
aacatcacagcagcaggggcagggcaactggcggagggactgaggttcaatcggtcacta
cagttcttggggctttggggaaataaaataggtgataaaggtgcagaggccattgccaat
gctctaaaggacagccaaaccttggtgtggctcagcctggtagacaatggtgttggcagt
gcaggagcatgtgctcttgccccactcatcaagaacagtacgcttgaggagctgtggtta
accaaaaactgcatcacaagaacaggtgtggagtgtctaatactggctcttgaaggcaac
actagtgtgaaggcagtgtggttgagaggtaatgagctcagcccagaagaggtggaggag
atgacacagcgggaacccaggcttacattctga
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