Salvelinus fontinalis (brook trout): 129855048
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Entry
129855048 CDS
T11136
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129855048 (scn4aa)
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
129855048 (scn4aa)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
IQCJ-SCHIP1
GPHH
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
129855048
NCBI-ProteinID:
XP_055778299
LinkDB
All DBs
Position
1:43966958..44000840
Genome browser
AA seq
1908 aa
AA seq
DB search
MAPLLPPTGADAFRRFTPESLAEIERLMEEKRIAAEVEGYVDDGPSEPSKDLEAGKGLPM
IFGDAPTEMLNTPLEDIDPFYKAKKTFIVITKGNTIFRFNAESACYILSPFNLLRRGAIK
ILIHSLFSMFIMITILSNCFFMTMSDPPSWSKTVEYVFTGIYTFEASCKVLSRGFVVGPF
TFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALVQS
VKKMVDVMILTVFALAVFALIGLQLFMGNLRNKCVRWPILNSTVFDDYNSTSSLDGTMGF
GETSNFTVPFDFKEYISNIENHYYLEGSLDALLCGNSSDAGRCPEGFTCIKAGRNPNYGY
TSYDSFGWAFLSLFRLMTQDYWENLFQLTLRAAGKTYMIFFVLVIFLGSFYLINLILAVV
AMAYDEQNEATLKEAQDMEEEFQRLLEQYRIQAQEQADAAAGSQATLTSRKELSHHSGSY
GGSADDEQSLGDDVIKDCNGRIVPRLAIVPVSSESESVPEDELKEDSMFHLEQPGLKNRS
ASAVSVLTTVMEELEDAQKPCPPGWYKFADTFLKWDCCVPWVWLKKWLLFIVMDPFVDLG
ITICIVLNTLFMAMEHYPMSPEFDHMLSVGNLVFTGIFTAEMVFKLCAMDPYYYFQVGWN
IFDSIIVTFSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNL
TLVLAIIVFIFAVVGMQLFGKSYKECVCKIATDCELPRWHMHDFFHSFLIVFRILCGEWI
ETMWDCMEVAGAGMCLVVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSSDDDGEMNNLQI
AIGRINWGIDWVKAFVRHMVLQLLGKKATGDKEGGEGIEGNPEKETFALNHLDTCQDSKM
ADGMTNCVDGLQADGEMSLNVPIAQGEPDFENDDDDSGSFTSDEENGHGDHVKLLGAVGD
ESSVCSTLDYVPEPEPVEEEEEEEPEPEEPEACFTDGCIARWPCLTFDVSQGRGKKWWNL
RRTCFTIVEHDYFETFIVFMILLSSGALAFEDIYIERRRTIKIILEYADKVFTYVFIIEM
LLKWVAYGFKTYFTNAWCWLDFLIVDVSLVTLGANWMGYSELGPIKSLRTLRALRPLRAL
SRFEGMRVVVNALIGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYRCINTTTEELFPI
TEVNNRSDCLALQHATQEARWVNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREV
EEQPSYEINLYMYIYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGDDIFMTEEQKKYH
EAMKKLGSKKPVKPIPRPTNMIQGAVFDFITQQFFDIFIMVLICLNMVTMMVETDDQSEE
KEKVLYKINLAFIVVFTCECLLKMFALRHYFFTIGWNIFDFVVVILSVAGIMLSDIIEKY
FVSPTLFRVIRLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFG
MSNFAYVKKQAGIDDIFNFQTFGSSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENP
GSDVRGNCGNPGMGIMFFCSYIIMSFLVVVNMYIAIILENFNTAQEESGDLLCEDDFVMF
DETWEKFDLEGTQFIEYAKLSEFCDTLQEPLRIAKPNRIKLISMDLPLVTGDKIHCLDIL
LAVTQEVLGEGVEMTAMKVSIEAKFNMNNPTTDSYEPITTTLRRKEEEAAAVIIQRAYRK
HLLKRSILHASFMRRSKRQIRREVNEEPPETEGLLVRKMNVLYGSDLDLAAEMELAGLRA
QPISVPLVSNRPSDLPKPTQTTRPEPGRPLLLVVPVEVTSEVVLHSAPVTSDPPLDLPEQ
TQPSGSKPTGLEPTWPEPAGPNLLVFPVEVTPYSCSHESIDNLRESIV
NT seq
5727 nt
NT seq
+upstream
nt +downstream
nt
atggcacccctgctccctcccacaggcgctgatgcgttccgccgcttcaccccggaatcc
ctggcagagatcgagaggctcatggaggaaaagcgaatagccgcggaagtagaagggtac
gtagatgatgggccgtcggagcccagcaaagacctggaagccggcaagggtctgcccatg
atctttggagacgccccaacggagatgctcaacacacctctggaggacatagaccccttc
tacaaagcaaagaagacctttatcgtcatcaccaaaggaaacacaatcttcaggttcaat
gccgaatcagcttgctacattctaagccccttcaatcttcttagaagaggagccattaaa
attctcatacattcgttatttagcatgttcatcatgattaccattctgtcgaactgcttt
tttatgacgatgagcgacccaccgtcatggagtaaaactgtggagtatgtttttactggt
atttatacctttgaggcctcatgcaaagtgttgtcaagaggctttgttgtcggacctttt
acattccttcgagatccatggaattggctggatttcatggtgatcagcatggcgtacgtc
acagagtttgttgatctaggcaacgtgtcagcccttaggacgttccgtgtactccgagcc
cttaaaacaatcactgtgattcctggattaaaaaccatcgtgggcgccctggtccagtct
gtaaagaaaatggtagacgtgatgatcctcactgtgttcgccctggccgtgtttgcactc
atcggcctgcaactcttcatgggaaatttgcgcaacaagtgtgtccgatggcccatcctc
aactcaacggtgttcgacgattacaactccacctcgtcgcttgacggcaccatgggtttc
ggcgaaacatcaaatttcactgtccctttcgatttcaaggagtacatcagcaatatagag
aatcactactatttggaaggtagtctggatgctcttctctgcggaaacagctctgatgct
gggaggtgcccagaaggattcacgtgcataaaggctgggagaaaccccaactacggctac
accagctacgactccttcggctgggccttcttgtccctcttcagactcatgacgcaggac
tactgggagaacctgttccaactgacacttcgagcagcggggaagacgtacatgatcttc
tttgtgctggtcatcttcctgggttccttctacctcatcaacctcatcctggccgtggtt
gccatggcctacgatgagcagaacgaggccactctgaaagaggcgcaggatatggaggag
gagtttcagaggcttctggagcaatacaggatccaagcccaggagcaagctgatgctgct
gctggaagtcaggcgaccctgaccagtcggaaagagcttagtcatcactctgggtcatac
gggggctctgcggatgacgagcagagcctcggagatgatgttatcaaggactgtaatggg
agaatcgtgccccgtctggccatcgtaccagtgtcctctgagtcggagtcggttccagag
gacgagctcaaagaggacagcatgttccatctggagcagccaggcctgaagaacagatcg
gcgagtgctgttagtgttctcaccaccgtcatggaggagctggaagacgcccagaagcct
tgtccgcccggctggtacaagtttgccgacacgttcctgaagtgggactgttgcgtgccc
tgggtatggttgaagaagtggttgctctttattgtgatggaccccttcgtggacctaggc
ataaccatctgcatcgtgctcaacaccctcttcatggccatggagcactaccccatgagc
ccagagtttgaccacatgctctccgtggggaacctggttttcaccgggatcttcacagca
gagatggtcttcaagctttgcgccatggatccctactactacttccaggtcggctggaac
attttcgacagtatcattgtcacgttcagtctggtggagttaggtctagccaatgtccaa
ggcctgtccgttctcaggtctttccgtttgctgcgtgtcttcaaactagccaagtcgtgg
cccacgctcaacatgctgatcaagattattggcaactctgtgggcgctctgggcaacctg
accttggtgctggccatcatcgtcttcatcttcgccgtggtgggcatgcagctcttcggc
aagagctacaaggaatgcgtgtgtaagattgccaccgactgtgagttgccgcgttggcac
atgcacgacttcttccactcattcctcatcgtgtttcgcatcctgtgcggggagtggatc
gagaccatgtgggactgtatggaggtggccggagccgggatgtgcctggtggtcttcatg
atggtcatggtcatcggaaacctggtggtgctgaacctcttcctggccttgctgctcagc
tcattcagtggagacaacctgtccagtgatgacgacggtgagatgaacaacctccagatc
gccatcggcaggatcaactggggcatcgactgggtgaaagcctttgtccgccacatggtc
ctgcagctactgggcaaaaaagccaccggggacaaggaagggggtgaggggatcgaagga
aaccccgaaaaggagacctttgcactaaaccacttagacacgtgccaggattccaagatg
gccgacgggatgaccaactgtgtggacgggcttcaggcagacggcgagatgagcctcaat
gtgcccattgcccagggggagccggactttgagaacgatgatgatgacagtggatctttt
acatcagatgaagaaaatggacatggtgatcacgtaaagttgttgggtgcagtgggtgac
gagtcctcggtctgcagcacgctggactatgtacctgaaccagagcctgtggaagaggag
gaagaggaggagccagagccagaggaaccagaagcttgcttcactgatggctgtatcgcg
cgatggccgtgtctgacatttgacgtctctcagggcagaggcaagaagtggtggaacctc
cgcaggacctgtttcaccatcgtggaacacgactactttgagaccttcatagtcttcatg
atcctcctaagcagtggagctctggcttttgaggatatttacattgagaggcgaagaact
atcaaaatcatcctggagtatgcagacaaagtcttcacctatgtctttatcattgagatg
ctcttaaaatgggtggcgtacggcttcaagacctacttcaccaacgcttggtgttggctg
gacttcctaattgtggatgtttccttagtcactttaggagctaactggatgggctactct
gaacttggaccaatcaagtctcttcgaacactcagggctctaaggccacttcgagccctg
tcaagatttgagggaatgagggtggtggtaaacgctcttatcggcgccatcccctccatc
ttcaacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggggtcaac
ctgtttgccggaaagttctaccgctgcatcaacaccaccacggaggagctgttccccatc
accgaggtcaacaacaggagcgactgccttgccctgcagcacgccacccaggaagcccgc
tgggtcaacgtcaaagtcaactacgacaacgtgggcttgggctacctctctctgctgcaa
gtggccacatttaaaggctggatggacatcatgtatgctgcagtggactctcgagaagtg
gaggagcagccctcgtatgagatcaacctctacatgtacatctactttgtcatcttcatc
atcttcggctccttcttcaccctcaatcttttcattggtgttattattgacaatttcaac
cagcaaaagaaaaagtttggtgatgacatctttatgacagaggagcagaagaaatatcat
gaagccatgaagaaacttggctcgaagaagccagtgaagcctatcccaaggcctacgaac
atgattcaaggcgctgtgtttgacttcatcactcagcagttctttgacatcttcatcatg
gtcctcatctgcctcaacatggtcaccatgatggtggagacggacgaccaaagcgaggag
aaggaaaaggtcctttacaagatcaacctggccttcatcgtagttttcacctgcgagtgt
ctgctcaagatgtttgcccttcgccattacttcttcaccatcggatggaatatttttgat
tttgtcgtggtcatcctgtccgtcgcaggtataatgctgtcggacatcatagagaagtac
tttgtgtcacccaccttgttcagggtcatcaggctggctaggataggcagggtcctgcgt
ctcatcaaaggtgccaagggcattcggacgctgttatttgcgttgatgatgtcactccct
gccctgttcaacatcggcctcctgctcttcctcatcatgttcatcttctccatattcggc
atgtccaactttgcctatgtcaaaaaacaggcgggcatcgacgacatcttcaatttccag
acgttcggcagcagtattatctgcctgtttgagatcaccacctctgcgggttgggatggt
cttctgctgccaattctaaacagcggtcctccagactgcgacccagacattgagaacccg
ggctcggacgttcggggcaactgcggcaacccaggcatgggtatcatgttcttctgcagt
tacatcatcatgtccttcctggtggtggtcaacatgtacatcgccatcatcctggagaac
ttcaacacggcccaagaggagagcggggacctgctgtgcgaggatgactttgtgatgttc
gacgagacctgggagaagttcgaccttgagggcacgcagttcatcgaatacgccaagctg
tcagagttttgtgacaccctgcaggaacccctgcgtatcgccaagcccaaccggatcaag
ctgatctcgatggacctgcccctggtcacgggcgataagattcactgcctggacatccta
ttggccgtcacccaggaggtgctgggcgaaggggtggagatgacggccatgaaggtgagc
atcgaggccaagttcaacatgaacaaccccacgacagactcctacgagcccatcaccacc
acgctgcggcgcaaggaggaggaggcagcagccgtgatcatccagcgggcttaccgcaag
cacctgctcaagcgctcaatcctgcatgcctccttcatgcgccgctccaagaggcagata
aggcgggaggtgaacgaggagcccccggagacggagggacttctggtgcgaaagatgaac
gtgctctatgggagcgacctggaccttgccgcagagatggaattggctgggttgcgagca
caacccatatcggtccctctggtgtccaatcggccatcggaccttcccaagccaacacag
accaccaggccggagcctggcagaccactcctcttggtggtccccgttgaggtcaccagt
gaggtggtgttacactcagcccctgtgacgtctgatccgccattggacctcccagagcaa
acacaaccatcagggtcgaagcccacagggctggaacctacctggccggagcctgctggg
ccaaacctcttggtgttccccgtagaggtcaccccctattcgtgtagccatgagtcaata
gacaacctgcgagagtcgattgtataa
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