Salvelinus fontinalis (brook trout): 129855332
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Entry
129855332 CDS
T11136
Name
(RefSeq) tumor necrosis factor ligand superfamily member 6-like
KO
K04389
tumor necrosis factor ligand superfamily member 6
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04060
Cytokine-cytokine receptor interaction
sfon04068
FoxO signaling pathway
sfon04210
Apoptosis
sfon04217
Necroptosis
sfon05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129855332
04068 FoxO signaling pathway
129855332
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
129855332
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
129855332
04217 Necroptosis
129855332
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
129855332
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sfon04147
]
129855332
04052 Cytokines and neuropeptides [BR:
sfon04052
]
129855332
04090 CD molecules [BR:
sfon04090
]
129855332
Exosome [BR:
sfon04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
129855332
Cytokines and neuropeptides [BR:
sfon04052
]
Cytokines
Tumor necrosis fators
129855332
CD molecules [BR:
sfon04090
]
Proteins
129855332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
129855332
NCBI-ProteinID:
XP_055778851
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All DBs
Position
5:complement(23113828..23117489)
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AA seq
359 aa
AA seq
DB search
MSSLLSTCPATAPVTWLSFLLREEWMESVSERWCELVTDLLSVCGWKLWVPVTQVFIRLR
CSDRSTHLLHTKATHTLTLLSHTLCTMSGTQGYPYPQVFLVDSGRGPQPSPQPSVQPPGM
LPCWSFPPAHERVMERGRVRGCRGVGSWSLAMALLFLLLLVFGALGLGAYQIFKLQTQLD
GIQQEMNIEIDGRGPEKLVGDLPEINPNRGKTAGRPAAHVIGRIEKHVSQNTLRWEPKAG
RAFTEGGVVYRDGGLQVNETGLYHIYSRVQFEANHCTPTDALVHSVFVKRPGNRKSLTLM
EGHREGYCNLGSHGHVWTSGSYLGSTLKLEKQDWLYVNVSHPAMLSHAHHANFFGLHKI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagctcattattatctacttgtcctgcaacagcaccagtcacctggctaagtttcctt
ttgagagaggagtggatggagagcgtgagtgagaggtggtgtgagcttgtcacagaccta
ctcagtgtgtgtggttggaagctgtgggttccagtaacccaggtttttataagactgaga
tgctcagatagaagcacacacctcctgcacacaaaggcgacacacacactcacgctcctc
tctcacacactttgcaccatgagcggtacacagggctatccttacccccaggtgtttcta
gtggacagtggtagaggtccacagccgtctccacagccgtcggtccaacctccaggcatg
ctgccctgctggtccttccctcctgcccacgagagagtgatggagcggggcagggtcaga
ggctgcaggggggttggctcctggagcctggctatggctctgctgtttctgctgctgctg
gtgtttggagcattgggactgggtgcctaccaaatattcaaactacagacgcaactcgat
gggatacaacaggaaatgaacatagagatcgatggtcgtgggcctgagaagctagtgggt
gaccttccagagatcaatccaaacagagggaagacagccggcagacctgcagcacatgtt
ataggtcggattgagaagcatgtttcacagaataccttgcgttgggagccaaaggcgggg
cgggccttcacagaggggggcgtggtctatcgggatggcggtctgcaagtcaacgagact
gggctctaccacatctactcccgggtgcagtttgaagccaatcactgcacccctacagat
gccttggttcactctgtgtttgtaaaaaggccagggaatcgcaagtctctcaccctaatg
gaggggcacagggagggctactgcaacctgggctctcatgggcatgtctggacctcgggg
agttacctgggatccacactgaagcttgaaaagcaggactggctgtatgtgaatgtctcc
catccagccatgctcagccacgctcatcatgccaacttctttggactccacaagatctag
DBGET
integrated database retrieval system
