Salvelinus fontinalis (brook trout): 129856854
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Entry
129856854 CDS
T11136
Name
(RefSeq) pleckstrin homology domain-containing family M member 1-like
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04140
Autophagy - animal
sfon05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
129856854
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
129856854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129856854
Membrane trafficking [BR:
sfon04131
]
SNARE
SNARE associated proteins
Others
129856854
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
PH_11
Motif
Other DBs
NCBI-GeneID:
129856854
NCBI-ProteinID:
XP_055780552
LinkDB
All DBs
Position
1:49132188..49151865
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AA seq
1062 aa
AA seq
DB search
MLATQTPDTGPEAKDVKQWIKEKLAWSLKALQKRYVTTDVVVTSEDGDANLLCCALEAIF
IHGIKSKYVRSEAGGRGRKGGSRGPLPQPEFWSLLKTVTHGDVITELEKLSFVGTDTGRC
RAWLRLALNHGLMECYLASLFREGSKLQAHYQPSALLLDPEEREVLLSYIQGLASLTFNL
SYKSAVLNEWTTTPLALAGLCPAAQAEALDLPFLTNRKESWDTVSQSSGGSDTVEVQRGG
PGVLGKGIGGVSGFKTPLNSSNLSLDTTGSSQLSSSLSSDSLLQGHDPKSPDKETWPCDL
EISNMEKNGNAKRPLKDVLADFRESAHSSQDSMREDSYVSTPGADHLSENTAFSGSDSET
QGHVTHLTGPCNPASLGSDQEEPSTKTHVPSNVYSHIEGPSSLSDCVESTSTTPQLPVTE
TPQEKKTEYSASEPSAHMNLHRTTSVLSRTVSTDSVAHSHSWISEDDIYKPHLEEVADPD
DSLLGSGPACVNGFTSPPPEPETPQSPPSVVHRRQIGLSNPFRGLLKLGHLERRGTVGMW
RDYYCELSPFEFRLYQNAEERTCCDNCSLLRCEDARVTSAEGRFDLSFPGKRLLMRAANR
DEAEDWVDRIAEAVNKCRPLNLIDDQWEVLQLSDSSVTPDEFPKSSPSSASSVPTSPERG
GTVVEQEQQLELDWTRPTDPESDAIKEAVLYFCQDSEARNWTPLVFSLSLETLKGFRMQD
GQKVLRFSHPIEGIRDVVPDVSLGGPAFFRVVTARDTLKLRAKSSEEARVWRGLIRGALD
SYLESGEDWEPESPGVAHGAGGNIHRLVQHRLKGDGVLLAHLCTVPTEKGLDLQGFKCAG
CPKVMGVSRGKARLCEFSGQYYCDACHQGDTIVIPSRMVHNWDLTPREVSRRALKLLAQI
EHEPLLNLDLLNSDLWEHAEAMAQAQSLRQRLRLLGDYLLICRSGACKNIQTRLGPRTYL
LESSHLYSVMDLRQIAEGMYVAYLNTLIQFASNHVHHCDLCTQRGFICQICHASDIIFPF
QFDTTTRCKECKAVFHATCKAKSPSCPRCLRLQRYLERDLQD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgttagccacacagaccccagatacagggccagaggcaaaagacgtcaagcagtggatt
aaggagaagttggcgtggtcactcaaggcgttgcagaagcgctacgtgacaaccgatgtc
gtggtgaccagcgaggatggtgacgccaacctgctgtgctgcgcactggaggccatcttt
atccatggcatcaagagcaaatatgttcgctccgaggccgggggacgcggcaggaaaggg
gggtcccggggacccctaccccaacctgagttctggagcctgctcaagacggtcactcac
ggtgatgtgatcacggagctggagaagctgagcttcgtgggtacggacacgggtcgctgc
cgggcctggctgcggctggccctcaaccacggcctgatggagtgctacctggcctccctc
ttccgcgagggctccaaactgcaggcccactaccagccctccgccctgcttctggaccct
gaggagcgtgaggtgctgctcagttacatccagggcctggcctccctcaccttcaacctc
tcttacaaatcggccgtgctcaacgagtggaccaccacccctctggctctggctggcctc
tgccctgccgcccaggctgaagcgctcgacctcccctttctcaccaatcgcaaggaatcc
tgggatacggtgtcacagtcgtccggcgggtcggatacggttgaagtgcagcgagggggg
ccaggggtactggggaaggggattgggggggtctcagggtttaagaccccactaaattca
tccaatttgagcctggacaccacagggtcgtctcagctctcctccagtctgagctctgac
agtctgcttcaaggtcacgatcccaagagcccagacaaggagacctggccatgtgacctg
gaaatctccaacatggagaagaatggcaatgccaagaggcctctcaaagatgttctggca
gacttcagggagagtgcccattccagtcaggactccatgcgcgaggattcgtacgtgtcc
accccaggcgcagaccacctctctgagaacactgccttcagtggctccgacagcgagacc
caggggcatgtcacacatctcactggcccctgtaaccctgcttcactggggtcagaccag
gaggagccttccactaagacccacgtcccctccaacgtgtactcgcacattgaagggccc
tccagtctcagtgactgtgtagagagcacatcgacaactcctcaactgcctgtcactgag
acgccacaggagaaaaaaactgaatattctgcctcggagccttcagcccacatgaaccta
caccgcactaccagcgtgctcagtcggacggtgtctacagactcagtcgcacattcccac
tcctggatctctgaggatgacatctataagccacaccttgaggaagtggctgaccccgat
gactctttgctagggtctggcccagcttgtgtgaatggatttacctctccccctccagag
cccgagaccccccagtctccccccagcgtggttcaccgcaggcagataggcctctccaac
cctttccgcggactgctgaagctgggccacctggagcggcggggcacggtgggcatgtgg
cgcgactactactgcgagctctcgcccttcgaattccgactctaccagaatgcagaggag
cgtacctgctgcgacaattgctccctgctgcgttgcgaggacgcccgcgtcacctcggcc
gagggccgcttcgacctttccttccccgggaaaaggctcctcatgcgggcggccaaccgc
gatgaggccgaggactgggtggaccgcatcgctgaagccgtcaacaagtgccgcccgctt
aacctcatcgatgaccagtgggaggtgctgcagctctctgacagcagtgtaaccccggat
gaattcccaaaatcttccccttcatccgcctcctccgtacccaccagtcccgagcgaggg
gggactgtggttgagcaggagcaacagctggagctggactggacgcgtcccacagaccca
gagtcagacgccattaaggaagcggtgctgtacttctgccaggactccgaggcacgcaac
tggactcctctcgtcttctccctctccttagagactctcaagggcttccggatgcaagac
gggcagaaggtgctgcgcttctcccacccaatcgagggcatccgggacgtggtcccagac
gtttctctgggtggaccagccttctttagggtcgtaacggccagggatacgctcaagctg
agggccaagagctctgaggaggcacgtgtctggaggggcctcatcaggggagccctggac
tcctacctggagagtggagaagactgggagcctgagagccccggggtggcacatggggcg
ggagggaacatccacagactggtgcagcatagactgaagggggacggggtgctgctggcc
catctatgcacagtgcccacagagaaggggctggaccttcagggcttcaagtgtgcaggt
tgtccaaaggtgatgggcgtttcccgagggaaagccagactgtgtgagttctcagggcag
tactactgcgacgcttgtcaccagggcgacaccatcgtcataccctcccgcatggtgcac
aactgggacctcacacctcgggaggtctccaggcgtgcacttaagctgctggctcagatt
gaacatgagcccctgctgaaccttgaccttttgaactctgacctgtgggagcatgccgag
gccatggcccaggcacagagcctcagacagaggctgcgtctcctaggagactaccttctc
atctgccgcagcggagcatgcaagaacatccagaccagactgggtccaaggacatactta
ttagaatcaagccatctctacagtgtcatggacttacgacagatagcggagggaatgtat
gtggcctacctgaacactttgatccagtttgcctccaaccacgtccaccactgtgacctt
tgtacccagaggggcttcatctgccagatctgtcacgccagtgacatcatcttccccttc
cagttcgacactaccaccaggtgtaaagagtgtaaggccgtgtttcacgcaacctgcaag
gccaagtcgccttcctgtccacgatgcctgcgtcttcagaggtacctcgagagagatctg
caggactaa
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