Salvelinus fontinalis (brook trout): 129856967
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Entry
129856967 CDS
T11136
Name
(RefSeq) rho guanine nucleotide exchange factor 1-like isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04270
Vascular smooth muscle contraction
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
129856967
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
129856967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sfon04131
]
129856967
Membrane trafficking [BR:
sfon04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
129856967
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Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDV_N
PH
PGDH_C
Motif
Other DBs
NCBI-GeneID:
129856967
NCBI-ProteinID:
XP_055780751
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All DBs
Position
6:complement(9379561..9424443)
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AA seq
1051 aa
AA seq
DB search
MSIIGAEDEDFENDLDPTVDDHSSHFTSIELVKSRPTHLLVFLQHVILQFDCSSLLCYLH
ADLFKNLSTKETKKQFVEFYNSFLDKSAILRVQIPHNVSFELDRTRPDLLSEEQQRKFVQ
DVQLAQAPEVLRQLEDFRQKRMMGMTPNAAELLEVESHYPTDRIPMEMKEKAVAETLLDK
MSEIHPSIVADEEKCSSIFAAVAFYMKHLGVKSRVADSKKSRGFFRRPLGKNKKSEESTK
SKPKGGFPNILSAAGGWIAGSTEVKLPKVEAEVDKEKVNQERKVSSVLPPSRGSSAPDAA
PPALNRKSVSTGSSPHQGLEVSEGPVVHISVTSSPDFSHSEIGLFSSRSDPHLVAEGGEL
SPAGMAGGLAIWELPSPKEPPLEENLDKDRRKTRRVGRSESARVDRHSFRRRGSSRAKQS
RSRSDVDLQAAATAAHSSPTSPHPSVDEGVLLPEGVLPGLSLSGPTPQQEEQDPRLLELE
QDPPNWREHTPPDTLKDLSKKETKRQEVINELFATEHAHVRMLSVLQTVFWKPLEREELM
TATELATIFPSLDEIIDMHYAFYEHLKKLRQHNFIVKAIGTTLLNRFGGTEGEWFQKLTS
RFCSHQTWALEQLKMRQKKDPRFNSFILEAESRPQCRRLQLKDIIPTEMQRLTKYPLLLE
NIAKCTEDTLEKESIQQSAECCRKILNHVNEEVKQMENLLTLKDYQRRLDTSGLKPSNEL
YLEYKYLDLAQRRMIYEGPLTWRVTKEKTLEVQCVLLGDLLVLLQKQDDKMVLKCQSKSN
IAVQEGKQMLSPIIKLDSAFLREVATDRKAFYVIFTWDSGAQIYELVAQSVGERKNWTDV
IKMAVDELKKTGPPSDLKRGNSILTGGGHPYSPTTFPQPPLSPTENGGVLLKNSIERDKN
SLTDEMKSVDSRHSLIYYLSDKGFDLIGNSDQVKVANSALNEVMSLKRLLVGSISLSDDS
QPDEQNGREGPESQDQGLQGEEEGGGEGGGMKIDEEGGISAPLVLSQERMEEVRRKLQSL
EVQLKRLQSVEEEHHRLQQALSKFSLEGGNF
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcatcggggccgaggatgaggactttgagaatgatctggaccccacggtggat
gaccacagcagtcacttcaccagtatagagctagtgaagagccggccaacccacctgctg
gtcttccttcagcacgtcatcctgcagttcgactgctcctccctgttgtgttacctccat
gctgacctcttcaagaacctcagtaccaaagagaccaagaagcagtttgtggagttctac
aacagcttcctggacaagagcgctattctcagagtgcaaatacctcacaatgtatcgttt
gagttggaccgtaccagaccagacctgctcagtgaggagcagcagaggaagtttgtccag
gatgtccagttggctcaggccccagaggtgctgcgacagctggaagactttaggcagaag
aggatgatgggtatgacccctaacgcggcagagctgctggaggtggagtctcactacccc
actgatcgtatccccatggagatgaaggagaaggccgtggcagagaccctgctggacaaa
atgtctgagatccatccctccatcgtcgcagacgaggagaaatgttcgtcgatctttgca
gcagtggccttctacatgaagcacctaggagtgaagtccagagtagctgacagtaagaag
tccagagggttcttcaggagaccccttgggaagaataagaagagtgaggagtccactaaa
tctaaaccgaaggggggttttcccaacatcctcagcgccgccggtggctggattgctggc
agcactgaggtcaaacttcctaaagtggaggctgaagtggataaagagaaggtgaatcag
gagcgtaaggtttccagcgtcctccccccctctcgaggctcttctgcccctgatgctgct
cctccagcattaaacaggaagtctgtttccacaggatcctccccccatcagggtttggag
gtcagtgagggcccagtagttcacatcagtgtgacctccagcccagacttctcccacagc
gagataggtctgttcagcagccgttcggacccccatttggtggcggaggggggcgagctg
tcccccgcggggatggcaggggggctggctatatgggagctcccctcacccaaagaaccc
cccctggaggaaaacctggacaaagacagacgcaagacaaggcgtgtgggacgcagtgag
agtgctcgtgtggacagacattccttccgtcgccgtggctcctcccgggccaaacagtcg
cgttcccgtagcgacgtggacctgcaagccgccgccacggcagcacactcctccccgacc
tctccccacccctctgttgatgaaggggtgttactccccgagggtgtgctcccaggtctt
tccctctctggccccacaccccagcaggaggaacaggaccctcgcctcctggagctggag
caggacccgcccaactggagagaacacacccccccagacaccctcaaagacctcagcaag
aaggagaccaagcggcaggaggtcatcaacgagttgtttgcgacggagcacgcccacgtg
cgcatgctgagtgttctgcagacagtgttctggaagcctctggagagagaggaactcatg
accgccacagagctggccaccatcttccccagcctggatgagatcatagacatgcactat
gctttctatgagcacctgaagaagctgcgtcagcacaatttcatcgtcaaggccatcgga
accacgttactcaacaggtttggagggacggagggtgagtggtttcagaagctgacgtct
aggttctgtagtcaccagacgtgggccctggaacagctgaagatgagacagaagaaagac
cctcgtttcaactccttcatactggaggcagagagtaggcctcagtgtcgtaggctgcag
ctgaaggacatcatccccactgagatgcagaggctcaccaaataccccctactgctggaa
aacattgccaagtgcacagaggacaccttggagaaggagagtattcagcagagtgcagag
tgctgtaggaagatcctcaaccacgtcaacgaggaagtcaaacagatggagaacctgctg
accctgaaagactaccagcgcaggctggacacctcaggactcaaacccagtaacgagctg
tatctggagtacaagtaccttgacctggcccagagaaggatgatctatgaggggcctctg
acctggagagtgaccaaggagaaaacattagaagtgcagtgtgtgttgctgggggatctg
ttggtgctgttacagaagcaggatgataagatggtgttgaagtgtcagagtaagagtaac
atcgctgttcaggagggcaagcagatgctcagccctatcatcaaactagactctgccttc
ctccgagaggtggccacagaccgtaaggccttctacgtgatcttcacctgggacagcggg
gctcagatctacgaactggtggctcaatctgtcggggagaggaagaactggacagatgtg
atcaagatggcagtagatgagcttaagaagacaggacctccatctgacctcaagagagga
aacagcatcttaactggaggaggacacccatacagccccaccacgtttcctcaaccccct
ctcagccccactgaaaatggaggagtcttgttgaaaaacagcattgaacgagataagaac
agcctgactgatgagatgaagtctgtggactctcgtcattctctgatttattacctctcg
gacaaaggcttcgacttgattggcaacagtgatcaggtgaaagtggccaatagcgcgtta
aacgaagtcatgtccctcaagagactattggttggcagcatcagcctatcagatgactca
cagcctgatgagcagaatggaagggagggaccagagagccaggaccaaggactgcaaggg
gaggaggagggaggaggagagggtggagggatgaagatagatgaggagggagggatcagt
gctcctctggttctgtcccaggagaggatggaggaggtgcgccggaaactgcagagtctc
gaggtacagctgaagagactgcagagtgttgaggaggagcaccacaggctgcagcaggcc
ctgtctaagttctccctggaggggggcaacttctag
DBGET
integrated database retrieval system
