Salvelinus fontinalis (brook trout): 129862417
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Entry
129862417 CDS
T11136
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1-like
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04260
Cardiac muscle contraction
sfon04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129862417
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
129862417
04261 Adrenergic signaling in cardiomyocytes
129862417
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129862417
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
129862417
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Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
dCache_1
VWA_2
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
129862417
NCBI-ProteinID:
XP_055790053
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All DBs
Position
9:complement(30821173..30945056)
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AA seq
1101 aa
AA seq
DB search
MNVRACVWTGSWRLAMDTYRPHAVLILLLLSSDICLPSQFPTQLIIKEWVDQMQIELVTL
ADMASAGKNLTQIFLDNQNLYTVESNDAEELVARAARNIEQLLLKRAAALETLATSAENF
QMEHQWKDEYADGDIVYYNAKDNLEVNETEGRKNRIRPAFKEDMLFKRLTSHNHTAVHIP
TDIYDGSTIVLNELNWTEALEGVFKKNREDDPTLLWQVFGSATGLARYYPASPWMDARKT
PSKIDLYDVRRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVGEMLETLSDDDYV
NVVYFNTRVNNTACFDHLVQANVRNKKILKDAVQNVSAKGITNYTKGFEFAFEQLYATNI
TRANCNKIIMLFTDGGEERASAILQKYNADKKVRIFTFSVGQHNYDKGPVQWMACANKGY
FYEIPSIGAIRINTQEYLDVLGRPMVLADQLAKQVQWTNVYLDALELGLVITGTLPVFNK
TKYKDESGLEIQNQLILGVMGIDVSLDDIKKLTPRYTIGPNGYYFAIDPNGYVLLHPNLQ
PKNPKFQEPVTLDFLDAELENDIKVQIRRMMIDGNPGEETIDTLVKTQDERYIDRGVRTY
TWAQVNGTDYSLALVLPTYSEHYLQAKLGDTIRQAMGSKDGSLFSSAMDTLQVEMFDELG
YTFIAPREYCKGLKDNDNNTQFLLDFNQFIDRNTLEEPCNVTLVSRLLLDAGLTADLVKL
WKEQTLGGILARFVATDGGITRVYPRSAGEEWTENAETYDSSFYKRTLDNNIYIFTAPYF
NKSRESGYESGILVSKAVDLNIDGVNLKPAVVGVKLNVSAWMSNFMNATIKVNCKDEICG
CLKNDKHVDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVVMISLVNTSLYSFNKTYDY
QSVCDPERDSKAAAGPRSVYVPTIADMLSIGWWASTAAWSIIQQLFYGLIFPSFLEAADS
DDDMSANMFKESCITEQTQYFFDNEERSYSGVLDCGNCSRMYRAEKLPHTNLVFLITDAK
ATCLSCDPRPLRQAEQPSQGPDPCELAQNPRYRKGPDVCFDNNIDEDDSDCGGGTSLSPT
LWPMLGLQLLLLWLLTGFRHS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcgtgcgtgtgtttggacggggagttggcgcctggcaatggacacctacaga
ccacacgccgtgttgattttactgttattatcgtcggatatttgtctgccgtcgcagttt
ccaacacaactcataataaaggaatgggtggatcagatgcagatagagctggtgaccctg
gcagacatggccagcgccgggaagaacctcacacagatctttctggacaaccagaacctg
tacacagtagagtcgaatgatgctgaggaactagtggctagggcagccaggaatatagaa
cagctgctactgaagagggctgcagctctggagactctggccacatctgctgagaatttc
cagatggaacaccagtggaaggatgaatatgcggatggtgacattgtttactacaatgca
aaggacaatttggaggtgaatgagacagagggtcggaagaaccggatcaggccagccttt
aaggaagatatgttgtttaaacgcctcacctctcacaaccacactgctgtacacatccct
actgacatctacgatggctccaccatcgtgctgaatgagttgaactggacggaagcactg
gagggtgtgtttaagaagaacagagaggatgaccctactctgctctggcaggtgtttggt
agtgctactggactggcccgatactacccagcctctccgtggatggatgctcggaagacc
cccagtaagatcgacctgtacgacgtacgcaggagaccctggtacattcagggagctgcc
tcacccaaggacatgctgatcctagtggacgcgagtggcagtgtgtctggtctgactctg
aagctgatcaggacctctgtcggtgagatgctggagactctgtctgatgatgactatgtc
aacgtggtctatttcaacaccagggtgaataacacagcgtgttttgaccacctggtccag
gccaacgtgaggaataagaagatcctgaaggatgctgttcagaacgtctctgctaaaggc
atcaccaactacaccaagggatttgagtttgccttcgaacagctctatgcaactaacatc
actagagccaactgtaacaagatcatcatgctgttcactgatggaggagaggagagagcg
tcggccatactgcagaaatacaacgctgacaagaaggtgcgtatcttcaccttctcagtg
ggtcaacacaactatgataaaggtccagtccagtggatggcctgcgctaataaaggatac
ttctatgagattccctctattggagccatacgcatcaacactcaggagtacctggatgtc
ctgggcagacccatggttctagctgaccagctggccaagcaggtccagtggactaatgtc
taccttgatgctctggagctaggtctggtcatcacaggaaccctacctgtcttcaacaag
accaagtataaagatgaatcgggtttagagattcagaaccagttgatcctcggggtgatg
gggattgacgtgtcactagatgacatcaagaagctcacaccacgctacactattggacct
aatggatattattttgccatcgaccccaatggatatgtactgctacaccccaacctccaa
cctaagaatcctaaattccaggagcctgtcactctggacttcctcgatgctgaactggag
aacgacatcaaagtccagatcaggagaatgatgatagatgggaacccaggtgaagagacc
atagatactctagttaaaactcaggatgagagatacatcgacagaggagtaaggacgtac
acctgggctcaggtcaatggaacagactacagcttggccctggtcctgcctacctacagt
gaacactacttacaggccaaactgggagacaccatcagacaggccatgggttctaaagat
ggctctctattctcttcagccatggacactctgcaggtggagatgtttgatgagttggga
tacaccttcatcgcccccagggagtactgcaaaggcttgaaagacaacgacaacaacacc
cagttcctcctggacttcaaccagttcatagacaggaacacactggaagaaccatgtaat
gtgactctggtcagtaggctgctgttggacgctgggttgactgctgatctggtcaaactg
tggaaggagcagacattgggtgggattctggccaggtttgtagccactgatggagggatc
accagagtctatcccaggagtgctggagaggagtggacagagaatgctgagacctatgac
tcaagtttctacaagaggactctggataacaacatctatatattcaccgctccatacttc
aacaagagcagggaatcaggctacgagtcaggtattctggtgagcaaggctgtagacctc
aacatagatggagtcaacctcaaaccagctgtggtgggggtgaaactgaacgtctctgcc
tggatgagcaacttcatgaacgccaccatcaaagtcaactgcaaggatgaaatctgtggc
tgtctgaagaatgataagcacgttgactgtgtcatcctggatgatggcggcttcctgctg
atgtccaatcaggatgagtatatcactcagattggtcagttctttggggaggtagaccca
gtcgtgatgatcagtctggtcaacacgtctctgtactccttcaacaagacttacgactac
cagtcagtctgtgatcctgagagagacagcaaggctgctgcagggccacgatctgtctat
gtgcccactatagcagacatgctgagtataggttggtgggcctccactgctgcctggtcg
ataatacagcagctcttctatggtctcatattccccagcttcctagaggcagcggactca
gatgatgacatgtcagctaacatgtttaaggagagttgtatcacagagcagactcagtac
ttcttcgacaacgaagagagatcctactcgggagtccttgactgtggaaactgctccagg
atgtatcgagctgagaagctgccccacactaacctggtgtttctgatcactgatgcgaag
gccacctgtctgtcttgtgaccccagaccactaagacaagctgagcaaccctcccagggt
ccagacccctgtgagctggctcagaaccccagatacaggaaaggacctgacgtgtgtttc
gacaacaacatagacgaggatgattctgactgtgggggcgggacctctctaagccccacc
ctctggcccatgttggggctccaactactgctgctgtggctcctcactggcttccgacat
tcatga
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