Salvelinus fontinalis (brook trout): 129863925
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Entry
129863925 CDS
T11136
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K23932
spectrin beta, non-erythrocytic 2
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04517
IgSF CAM signaling
sfon04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
129863925
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
129863925
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sfon04812
]
129863925
Cytoskeleton proteins [BR:
sfon04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
129863925
Intermediate filaments
Intermediate filament-binding proteins
129863925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
PH_11
PAS_8
PH_17
Motif
Other DBs
NCBI-GeneID:
129863925
NCBI-ProteinID:
XP_055792333
LinkDB
All DBs
Position
10:28389191..28488280
Genome browser
AA seq
2393 aa
AA seq
DB search
MSTISPTDFDSQEIQQQYNDINNRWDLAAETNWDNENSSARLFERSRIKALADEREAVQK
KTFTKWVNSHLGRVTCRIGDLYTDLRDGRMLIRLLEVLSGEQLPKPTKGRMRIHCLENVD
KALQFLKEQKVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKE
ALLLWCQMKTAGYPNVNVHNFTTSWRDGLAFNAIVHKHRPDVIEFDTLKRSNAHYNLQNA
FNTAENKLGLTKLLDPEDVNVDQPDEKSIITYVATYYHYFSKMKALAVEGKRVGKVLDYA
IEADQLVGNYESLASELLQWIEQTILTLNDRQLANSLNGVQNQLQAFNTYRTVEKPPKFT
EKGNLEVLLFTIQSKMRANNQKVYIPREGKLISDINKAWERLEKAEHERELALRNELIRQ
EKLEMLAARFDRKAAMRETWLSENQRLVSQDNFGVDLGAVEAATRKHEAIETDIGAYGER
VAAVEAVARELEAENYHDVRRVLARRDNVLRLWEYLKDLLAARRERLHAHRDLQRLLEEM
RYIMDWMGEMKGRLQSQDSGKHLHDVEDLLQTHNLVEADISAQAERVRGVQRAAQRFTSD
QQVYKPCEPALVGEKVSLLGRAYEELGQLAGERRERLEASRRLWQFLWEMGEEAAWIREQ
EQILSGGDCGRDLTSALHLLSKHEAFRDEMAARYGPLGHSIAAGQTLVEEGHFGAPECTE
RIRDVRAQWAHLEETSQLREVQLKEAVALHQFQTDANDMEAWILETLRQVSSQEVGHDEF
STQTLARKQREVEEEIQSHRTLIDSLHEQALSLPPVHANSPQVEGRLPAIEQRYEELESL
SASRRQALEGALALYRMYSEAGACQLWVGEKEQWLDGIMIPTKLEDLEVVQQRFETLEPE
MNNLGTRISDVNQVALQLLGSDNRSKEQIHQTQDQLNNRWKEFQRLADQRKHALESALNI
QNYHLECNEIQSWMREKTKVIESTESLGNDLAGVMALQRKLTGMERDLEAIQGKLDDLRN
EAEKLAEEHPDQAEEIHAHLGGIQEVWEELNATMKRREESLGEASKLQGFLRDLDDFQSW
LSRTQTAVASEDIPTSLPEAECLLSQHESIKNEWDNYKEDYEKMRAVGDEVTQGQTDAQY
MFLAQRLQALDTGWQDLRRMWENRHSLLAQAFDFQTFLRDVKQAEGFLNSQEYVLSHTEM
PSSLQGAEEAIKKHEDFLTTMEASEEKITGVVEAGRRLVNDLNANSDKIQEKADSIQERH
QKNREAANELLSKLKDNRELQHFLQDGQELTLWINEKMLTAQDMSYDEARNLHSKWQKHQ
AFMAELASNKDWLDKIDKEGQVLVTEKPELQPVVQQTLEGLQSQWEELESTTRAKAQCLF
DANRAELFTQSCSALDIWLKNLSGQLQSDDFGKDLTSVNILLKKHQMLEHQMEVREKEVQ
SLQSQALALSQDDAGVAVVEVDGQQRRVTDSFSQLQDPLNQRRQQLLASKEAHQFNRDLE
DEILWVKERMPLATSTDHGKDLPSVQLLIKKNQTLQKEIQGHQPRIDDIQTHHRGMSPGK
EEVDGEWQSALEQRLVELRDSWAQLIAETDERHARLVEANRAQQFYTDAAEAEAWMGEQE
LHMMSEDKAKDEQSALVMVKKHQTLEQALEDYAQTIHQLANSSRTMMTSEHPESERINLR
QAQVDKLYAGLKDLAEERRGRLQERLRLTQLKREVDDLEQWIAEREVVAGSHELGQDYEH
VTMLRDKFREFARDTSTIGQERVDAVNGQADDLIESGHPENASVAEWKDGLNEAWADLLE
LIDTRTQMLSASYELHRFHQDAREAMGRVREKKDALPSDLGRDLNTVQHLHRQHNAYEHD
IQALSGQVNQVQDDAARLQKAYAGEKAEEIHRSEHSVTEAWEGLLGAGQARRLLLLDTVE
KFRFFNMVRDLMLWMDGVNLQIDAHDSPRDVSSAGLVIANHQDIKSEIETRADSFTACNE
MGHSLINNNHYAADEIREKLHQLQGKRDEINNKWQDKMDHLQIVLEVLQFGRDAYVAETW
LAGQEPLVRGAELGSNVDEVESLIKRHEAFEKLAAGWEERFTLLEKLTTLEEQEIQRQRE
EEERARRPPTPPPTEVVAPSEAETHDARTSLDQTTLNQSVSVNGIHSDQDTSQSLSVSSV
SVGKKEKCEPVSKPVSKPKHPPRGSDSDSVNGPGRDSGLASSRLDPSATLPSKRADPGTD
AMEGMLYRKQEMESHAKKAASSFSLSSHRSWQNVYCVLRKGSLGFYKDQKSASSGIPYHG
EVPISLGEAVCEVAHDYKKRKHVFKLRLGDGKEFLFQAKDETEMASWIHSIHSAIPAGGS
GDHSPGGPRALNRAMTMPPISPSSADAAGVTMRNKEGKERDREKRFSFFGKKK
NT seq
7182 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatctctcccaccgacttcgacagccaggagatccagcagcagtacaatgac
atcaacaaccgctgggacctggccgcagagaccaactgggacaatgagaacagctcggca
cgcctctttgagcgctcacgcatcaaagctctggcagatgagcgtgaagcagtgcagaag
aagacctttactaagtgggtgaactctcacctgggccgtgtgacgtgccgcatcggggac
ctgtacactgacctgagagatggacgcatgctcatccgcctgctggaggtgctgtcagga
gaacagctgccgaagcccactaaggggcgtatgcgtatccactgcctggagaacgtggac
aaggccctgcagttcctcaaggagcagaaggtccacctggagaacatgggctcccacgac
atcgtggacgggaaccaccgcctcaccctgggcctcatctggaccatcatccttcgcttc
cagatccaggacatcagtgtggagactgaggataacaaggagaagaagtcagccaaagag
gctctgctgctctggtgccagatgaagaccgctgggtaccccaacgtcaacgttcacaac
tttaccaccagctggagagatggcctggcgttcaacgccatcgtgcacaaacacagaccg
gatgtgattgagtttgacaccctgaagcggtccaatgcccactataacctccagaatgcc
ttcaacacagcagagaataagctaggcctcaccaaactcctcgacccagaagatgtcaac
gttgaccagccagatgagaagtccatcatcacctatgtggccacctactaccactacttc
tccaagatgaaggccctagctgtggagggcaagagggttggcaaggtgctggactatgcc
attgaggctgaccagctggtagggaactatgagagcctggcttcagagctgctgcagtgg
attgagcagaccatcctcactctgaatgaccggcagctggccaactccctaaacggtgtg
cagaaccagctgcaggccttcaacacctaccgcacagtggagaaacccccaaagttcaca
gagaaaggcaacctggaggtgctgctgttcaccattcagagcaagatgagagccaacaac
cagaaggtgtacattcccagggagggaaagctcatctctgacatcaacaaggcgtgggag
cgtctggagaaggcagagcacgagcgggagctggcgctgaggaacgagctgattcgacag
gagaagctggagatgcttgctgctcgcttcgaccgcaaggccgccatgagggaaacctgg
ctgagcgagaaccagcggctcgtctctcaggacaactttggcgtggacctgggagcggtg
gaggctgccacgcgtaaacacgaggccatcgagacggacatcggggcgtacggggagcgt
gtggcggccgtggaggcggtggccagggagctggaggcagagaactaccatgacgtgcgt
cgcgtgctggcgaggagggacaacgtgctgcggctgtgggagtatctgaaggacctgtta
gccgctcgcagggagagactccacgcacaccgagacctgcagagactgctggaggagatg
agatacatcatggactggatgggagagatgaagggtcgtctgcagtcccaggacagtggg
aagcatctgcatgatgtggaggacctgctgcagactcacaacctggtggaggcagacatc
tcagcccaggcagagagggtccgcggggtccagagagctgctcagcgcttcacctccgac
caacaggtctacaagccgtgtgagccggcgctggtgggagagaaggtgtctctgctgggc
cgggcctatgaggagctgggccagctggctggtgagcggagggagcgcctggaggcctca
cggcgcctctggcagttcctgtgggaaatgggagaagaggcggcctggatcagagagcag
gagcagatcctgtcaggaggagactgtggccgcgacctcacctccgctctgcacctcctc
agtaagcatgaggccttcagggacgagatggcagcccgctacggtcctctcggccacagc
attgccgccggacagaccctggtggaggagggacactttggagccccagagtgcactgag
aggatcagggacgtacgtgctcagtgggcacacctggaggagacgtcccagctgagggaa
gtgcagctgaaggaggcggtggccctgcaccagttccagactgatgccaatgacatggag
gcctggatcttggagacgctgcgccaggtgtccagccaggaggtgggccacgacgagttc
tccacccagaccctagcccgcaagcagagagaggtggaggaggagatccagagccaccgc
accctcatcgactccctgcatgagcaggccctcagcctgcccccggtccatgcaaactcc
cctcaggtggaggggcgtctgcctgctattgagcagcgctatgaggagctggagtctctg
tctgcatcgcggcgtcaggccctggagggggccctggccctctaccgcatgtacagcgag
gcgggcgcctgccagctgtgggtgggggagaaggaacagtggctggacggcataatgatc
cccaccaaactggaagacctggaggtggtgcagcagaggttcgagaccctggagcctgag
atgaacaacctggggactcgtatctctgatgtcaaccaggtggccctgcagctcctggga
tcagacaaccgcagcaaagagcagatccaccagacacaagaccagcttaacaacaggtgg
aaggagttccagcgtctggcggaccagaggaaacatgccctggagtcggccctcaacatc
caaaactaccacctggagtgtaacgagatccaaagctggatgagagagaagaccaaggtg
atcgagtccaccgagagcctgggcaatgacctggctggtgtcatggccctgcagcgcaaa
ctcaccggcatggagagagacctggaggccattcagggtaagttggacgacctgagaaat
gaggcagagaagctggctgaggagcacccggaccaggccgaggagatccatgcccacctg
ggggggatccaggaggtgtgggaggagctcaacgccaccatgaagcgtcgtgaggagtct
ctgggcgaagccagtaagctgcagggattcctccgggacctggatgacttccagtcctgg
ctttcccgcacgcagaccgctgtggcgtccgaggacatccccacctcgctgccagaggct
gagtgcctgctctcccagcacgagagcatcaagaacgaatgggacaactacaaggaggac
tatgagaagatgcgggcggtgggtgatgaggtgacccagggccagacggacgcccagtac
atgttcctggcccagaggctgcaggcgctggacaccggctggcaagatctgcgccgcatg
tgggagaaccgccacagcctgctggcccaagctttcgacttccagaccttcctgagagac
gtcaagcaggctgagggcttcctcaacagccaggagtatgtgctgtctcacactgagatg
ccctccagcctgcagggagcagaggaggccatcaagaagcacgaggacttcctgaccacc
atggaggccagcgaggagaagatcacaggcgtggtggaggctggacgccgcctggtcaac
gacctcaacgccaactctgacaagatccaggagaaggccgactccatccaggagagacat
cagaagaatagggaagctgcaaatgaactcctctctaaactgaaggacaaccgtgaactt
cagcacttcctgcaggacggacaggagctgactctgtggatcaatgagaagatgctgaca
gctcaggacatgtcgtatgacgaggccaggaacctccacagcaagtggcagaaacaccag
gccttcatggctgagctggcctccaacaaggactggctggacaagatcgacaaggagggc
caagtgctggtgacagagaagccggagctgcagcctgttgtccaacagactcttgaaggc
ctgcagagccagtgggaggagctagagagcactacgcgcgccaaggcacagtgcctcttc
gatgccaacagggcggagcttttcacccagagctgctctgccctggacatttggctgaag
aacctgtcaggacagctgcagagtgatgacttcggaaaggatctgacatccgtcaacatc
ctgctcaagaagcaccagatgctggagcaccagatggaggtgcgtgagaaggaggtgcag
tcgctgcagtcccaggcgctggcgctgtcccaggacgatgctggtgtggcggtggtggag
gtggacggccagcagaggagagtcactgacagcttctctcagctccaggaccccctcaac
cagaggaggcagcaactgctggcatccaaggaggcccaccagttcaacagagacctggag
gatgagattctgtgggtgaaggagaggatgcccctggccacctccacagaccatggcaag
gacctgcccagtgtacagctgctcatcaagaagaaccagactttgcagaaggagatccag
ggccaccagccccgtattgatgacatccagacccaccaccggggtatgtccccagggaag
gaggaggtggacggggagtggcagtctgctctggagcaacgtctggtggagctccgggac
tcctgggcccagctcatcgctgagacagatgagcgccacgcccggctagtggaagctaac
cgcgcccagcagttctacaccgacgctgccgaggccgaggcctggatgggagagcaggag
ctacacatgatgtcagaggacaaggccaaggatgagcagagtgctctagtgatggtgaag
aagcaccagacattagaacaggctctggaggactacgcccagaccatccaccagctggcc
aacagcagccgcaccatgatgactagcgaacacccagagagtgagcgtatcaacctacgg
caagcccaggtggacaagctgtacgcagggctgaaggacctggctgaggagcgtcgtggg
cgtctccaggagaggctgaggctgacccagctgaagagagaggtggacgacctggagcag
tggatcgctgagagggaggtcgtggctggatcccatgagctgggacaggactacgaacat
gtcacaatgctgcgggacaagttccgggagtttgctcgggacaccagcaccattggccag
gagcgcgtggatgccgttaacggtcaggccgatgacctcatcgagtcgggtcaccctgaa
aacgccagcgtggcagagtggaaggacggtctgaacgaggcatgggccgacctgctggag
ctgatcgacacgcgcacccagatgctgtccgcctcctacgagctgcaccgcttccaccag
gacgcccgcgaggccatggggagggtccgggagaagaaggatgcgctgccctctgacctg
ggccgtgacctcaataccgtccagcacctccaccgacagcacaatgcctatgagcacgac
atccaggccctcagtggacaggtgaaccaggtgcaggacgacgcagcgcggctgcagaag
gcctacgctggggagaaggctgaggagatccaccggagtgagcactctgtcactgaggcc
tgggagggtctgctgggggccggccaggctcgccgactcctcctgctggacaccgtggag
aagttccgcttcttcaacatggtgcgtgacctcatgctgtggatggacggggtcaacctg
cagatcgacgcccatgacagccccagggacgtgtcctctgcagggctggtcatagccaac
catcaggacatcaagtccgagatcgagacccgggcagacagcttcaccgcctgcaatgag
atgggacactctctcatcaacaacaaccactatgcagctgatgagatccgggagaaactg
caccagctccaaggcaagagggacgagatcaacaacaagtggcaggacaagatggaccac
cttcagatagttctggaggtgctgcagtttggccgggatgcatatgtggcagagacatgg
ctggcaggccaggagcccctggtgcgtggggcggagctgggctctaacgtggacgaggtg
gagagcctgatcaaacgccacgaggcctttgagaagctagccgccggctgggaggagcgc
ttcaccctgctggagaaactcactacgctagaggagcaagagatccagagacagagagag
gaggaggagagggcgaggcgaccccccacaccaccacctacagaagtggtggccccatct
gaggctgaaacgcatgatgccaggaccagcctggaccagaccacactgaaccagtcagta
tcagtaaacggaatccacagcgaccaggacacctcacagtctttatcagtatcatcagtg
tcagtgggaaagaaagagaaatgtgaacctgtctctaaacctgtgtctaagccaaagcat
ccgccgcgtggttctgactctgactctgtgaatggtccggggagagacagcgggcttgcg
tcttcacgcctggacccgtctgccacgctacccagcaagagagctgaccctggcacagat
gccatggagggcatgctctaccgcaagcaggagatggagtcccacgccaagaaggcagct
agcagcttctctctctcttcccataggtcctggcagaatgtgtactgtgttctgcgtaag
ggcagccttggcttctacaaggaccagaagagcgcctccagtgggatcccctaccacgga
gaagtccccatcagcctgggagaggctgtgtgtgaggtggcacacgactacaagaagagg
aaacacgtcttcaagttacggctaggggacggtaaggagttcttgttccaagctaaagat
gagacggagatggcctcgtggatccactccattcatagcgccatcccagcagggggatca
ggagaccactcccccggaggccccagggccctgaaccgagccatgactatgccccccatc
tcccccagctcagcagacgctgccggggtcaccatgcgcaacaaggagggcaaggagagg
gaccgggagaagaggttcagcttctttggaaagaagaaataa
DBGET
integrated database retrieval system
