Salvelinus fontinalis (brook trout): 129868403
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Entry
129868403 CDS
T11136
Name
(RefSeq) E3 ubiquitin-protein ligase TTC3-like isoform X1
KO
K15712
E3 ubiquitin-protein ligase TTC3 [EC:
2.3.2.27
]
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sfon04121
]
129868403
Enzymes [BR:
sfon01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
129868403
Ubiquitin system [BR:
sfon04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
129868403
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TTC3
TTC3_DZIP3_dom
WHD_TTC3
TTC3_9th
zf-RING_2
TPR_BSK1_C
zf-rbx1
TPR_2
zf-C3HC4
TPR_16
TPR_1
zf-C3HC4_2
zf-RING_UBOX
TPR_17
TPR_11
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_11
TPR_19
Prok-RING_1
zf-RING_Vps41
ANAPC3
TPR_9
VPS18_RING_C
TPR_8
Motif
Other DBs
NCBI-GeneID:
129868403
NCBI-ProteinID:
XP_055798326
LinkDB
All DBs
Position
13:complement(30080606..30148415)
Genome browser
AA seq
1801 aa
AA seq
DB search
MSDSYSGPEFVDYDDIRHGAKFTYVKDSPFVALQPPDDKYERWNKIPVSLKKKAAQLMHV
SAFWYHILLCRENHNTTRWAVQVGFLDSNVSNDLSLKRLHRIEILEAILRAMEKGCLLED
QTRHMIWISNTFNLNVLEVLDDAICWLEQTGEPRIKQQVQELGPRGNCFAALQLIFAEYA
HYTQAMGVSRKKCMRELAQGPCQWFIEKSEEMKAKGNDQFQKKKYDAAVKYYSKAIKYHP
ENHIIYGNRALCYIRSEKYLKAVGDGKRATLIQPEWAKGHYRYCEAMFLLGEHKQAMAAN
EWAQTLCKADPEGMKDLLQQHAKFNIEMEESKCLREEESKVGSPNKTAAKKVSSKRTEST
TRADTTESRKQTAKSASKVEPSTKSTAPENKCSGVKVESLTQPVKAEGGAHSLDNAEGPK
ETKSQMADKKSSKSEHIASDKPKGKSRNQYSKTILGSSRDPSVRDTLVSAVQDAHTALAD
QRYRNAEQAFSQALVILETSTPKELGLCALDQVVLIYGHASALLEMGQPEELAEAQRDFE
KIITFEERKFQCLVFYGIGKVYQKENRFPVALQQFSDSMQMVKKKITPGKLTWPTTKVIV
EETKLNYFKELLEESIEICKFPPKPDAICRHQNCLGHSKMEIYFTDPDFKGFIRVVCCQS
CKVEYHISCWKKLKATAFSDKNEKDFLQEICFTPECGGRICHIKIYGSTGLVKCEFVSLA
SIEKPTGTEKLRVNQKCSSLKKLKSKEDRKLRRKQHRQDASLTMQDKNDQMPLENRETII
IEQKALFPTWLSYGDRVLLQISESKDLFRDQSHSVSVLMKNLKPWMDMDRIKRSELGMSY
AGRQPETLGDVVELLLERKNRVWARIFIHSLSGCLDTSPMLHDWAHKLDSSGLNAAGLFI
DRYADHLEQLDLAPLLQFAPLQDMLIEKFGTMPELFSRLGLTVTEYLKQAPPQEMRLFIW
TLEEHRDQYASCHAALDYYFEIMDGLCVVIKKTENENTINSLFKTKNRNRKKKQKEPKES
FVLSGMRGGTSKEDDDFFEEDSLMFLDPSDPFSVPNHLRDQVTEFEGQYNNGSRSSHYKR
ILDNNPDATESLYDYFAQILEEYGPLKAQDPQLVGELDNFPPDAQQKIQEAGGLKPFLLE
SLRFVMTDNLLGLMKHAVSLQDANTHRMDDLYFIGDIPNRLSLNPSAMAFLPNPQDSGTR
DYDEPIAIIPVQPNTVQFCGYLQAIGTPLDKSYDNHYLDNLEDLDLYISDVEEKGVETPG
KTAAEVQVSTCVTLSEVAVNTEPCDPFEGNNGDMAKKEKSNAEFEQQIQQIKQDYDTVKQ
RRLKEISALEGELEKINHLIQISHKELDLFQQKLEEEVKKDQREKKENQETVNTLKTKIK
ELAESQESISKSICEKNKDYETHLNNVLELSNQSAVEKMSLEDEIKRCRDLCAKATRRSE
GAELSILENRRGAGLRCLYRSLSEARAILAKLKEVAPRLPTQILQSATDAWGACVQEAEE
KVCATEFCCTPQLQYQDHKKQVKRGARLCTLPPVTVPSPPRPPPVPMLFPPQAHQQLPRH
LLHMRGHPGMPSAPPASAMAQSVALSPGSANDPSGHFTRPPQQNQAPGPQAPQPNNVCER
IMDRLSVMFPHYSRLLLYKFTGEMRTANGGCLTSLSYEEVINRVAQHILDHQDNTREQLS
SVGEGDPGAQPYGTPSHSDSPASVCSTGTPPPAHVWKRVGAHRHSQSKALNMEDPCIICH
EDMSKEDLCVLECRHSFHRECIKSWLKEQSTCPTCREHALLPEDFPLLLGRICRGHTSAF
S
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcatactctggtccagagtttgtggactacgacgatatcagacacggggcg
aaatttacctatgtcaaagacagtccctttgtagccttacaacctccagatgataaatat
gagcgatggaataaaatccctgtcagtttgaaaaagaaagcggcacagttgatgcatgta
tctgccttttggtatcacattctgctttgtcgagagaatcacaacaccacacgctgggct
gtgcaagtgggcttcctagattcaaatgtcagcaatgacttgagtctgaagagactgcac
aggattgaaattttggaagctatcctcagagcgatggaaaaaggatgtttattagaagat
cagacaaggcatatgatctggataagcaatacgtttaacttgaatgtgctggaggtcctg
gatgatgcgatatgctggctggagcagacaggagagccccgcatcaagcagcaggttcag
gagctgggccccagagggaactgctttgctgctcttcaactcatcttcgctgagtatgct
cactatacacaggccatgggagtcagtagaaaaaaatgtatgcgagagcttgcacagggc
ccctgccaatggtttattgagaaaagtgaagagatgaaggctaaaggaaatgatcagttt
cagaaaaagaagtatgatgcagcagtcaagtattactcaaaagccatcaaatatcaccct
gaaaaccacattatctatgggaacagagctctttgctatattcgtagtgaaaaatatcta
aaagctgttggtgatggaaaacgagccactttgatacaaccagagtgggcaaagggtcac
taccggtactgtgaggcgatgtttctccttggggaacacaagcaggcaatggcggccaat
gagtgggcccagactctgtgcaaggctgacccagaaggcatgaaggacctgctgcagcaa
catgccaagttcaacatagagatggaggagagcaaatgcctcagggaagaggagagcaaa
gttggcagtccgaataaaactgcagctaagaaagtttcaagtaaaagaacggagagtact
accagagcagacactacagagtcacgaaaacagaccgctaaatccgccagtaaagttgag
ccttccactaaaagcaccgctcctgagaacaagtgctcgggagtcaaggtggaaagtctg
acacagccagtgaaagctgaagggggagcacattcactggataatgcagaggggccgaaa
gagacgaaaagtcaaatggctgataaaaagagcagcaaatcagagcacatcgcttcagac
aaaccgaaagggaagagcagaaaccagtattcaaagacaatattaggcagctccagagac
cccagtgtgcgagacacgctggtgtcagctgtgcaggatgcccacacggccctggcagac
cagcgataccgcaacgcagagcaggccttctcccaggcccttgtcatcctggagaccagc
acaccaaaggaacttggtctctgtgctcttgaccaagttgtgctgatttatggccatgcc
tcagctctgttagagatgggtcaacctgaggaacttgctgaagctcaaagggactttgaa
aagatcataacctttgaagagcggaagtttcagtgtctagtgttttacggcattggaaaa
gtgtatcagaaggagaacagatttccagttgctctgcaacagttttctgattctatgcaa
atggttaagaaaaagataacacctggcaaactgacctggcccaccacaaaagttattgtt
gaggagactaagctgaactatttcaaggagctgctagaagaatccatagagatatgcaaa
tttccacctaaaccagatgcaatttgtcggcatcagaattgccttggccattccaaaatg
gaaatatacttcacagatccagattttaagggtttcattcgtgtggtttgctgccaaagc
tgcaaagtggagtaccatatcagctgttggaagaagttgaaagcaacagcattctctgat
aagaatgaaaaggatttcctgcaggaaatatgctttactccagaatgtgggggtagaatc
tgccatattaaaatctatggttcaacagggcttgtcaaatgtgagtttgtgtctttagca
tctattgaaaaacctacaggtacagaaaaattgagagtaaatcagaaatgttcaagtctc
aaaaagttgaagtccaaagaggatcgtaagctcaggcggaaacaacataggcaagatgct
tctctgactatgcaagacaagaatgatcagatgcctttggagaatcgggagaccattatt
atagaacagaaggctttatttcccacctggctgtcttacggggaccgtgttctgcttcag
atcagcgagagcaaggatctgttcagagaccagagccacagcgtctctgtgttgatgaag
aaccttaagccatggatggatatggaccggatcaaacgaagtgagctgggcatgtcgtat
gctgggaggcagccggagacgctgggggatgtggtggagctcctcctggaaaggaagaac
cgggtatgggcccgcatcttcatccacagcctgagcggctgcctggacaccagtcccatg
ctgcatgactgggcccacaaactggacagctcaggtctgaatgcagctggactgtttatt
gaccgctatgcagaccacctggagcagctggacctagctcctttgctacagtttgccccc
ctgcaggacatgctcatagagaagtttggcaccatgcctgagttatttagccgtcttggc
ctgactgtaacggagtacctaaagcaggcccctccccaggagatgaggctgtttatctgg
acgttggaggagcacagagaccagtatgcctcctgccacgctgcgctggattactatttt
gaaataatggatgggctttgtgtagtgattaaaaagacagagaatgaaaatacaattaat
tccctttttaagactaagaacagaaatcgcaaaaaaaagcagaaggagccaaaggagtcg
tttgtcttgtcgggaatgagaggtggtacctcaaaagaggatgacgattttttcgaggag
gactctttaatgttccttgaccccagtgacccattcagcgttcccaatcatcttcgtgat
caggtgacagagtttgagggacagtacaacaatggcagccgcagtagccactacaagaga
atattggacaataacccagacgcgactgagagtttgtatgactactttgcccagatcctg
gaggagtacggtcccctgaaggcccaggacccccagctagtgggtgagctggacaacttc
cctcccgacgcccagcagaagatccaggaggcaggcggcctgaagcctttcctcctcgaa
tcgctgcgcttcgtcatgactgacaacctcctgggccttatgaaacacgctgtgtcactg
caggatgccaacactcacagaatggatgatctgtacttcataggggatatccccaacaga
ctctccctaaacccttctgctatggcgtttcttccaaaccctcaagattctggaactagg
gattatgatgagcctattgctattatccctgtgcagcctaacacagttcaattctgtggc
tatcttcaagccattggaactccattggacaagtcgtatgataaccattatttggataac
cttgaggatcttgacctttatattagtgatgtagaggaaaagggagttgagacacctgga
aagactgcagcggaagtacaggtatcaacttgtgtcaccttgagtgaagtggctgttaac
acagagccttgtgatccttttgaagggaataatggagacatggcaaagaaagagaagagt
aatgcagagtttgagcagcagatccaacaaataaagcaggactacgacactgtgaagcaa
agacgcctaaaggagatctctgccttggaaggagagctagagaaaatcaaccatttaata
cagatcagccataaagagctggacctgttccagcagaagctggaggaggaggtcaagaaa
gatcaacgggagaagaaagagaaccaggagacagtgaataccttaaagacgaagataaag
gagctggcagagtcacaggagagcatttctaagagcatctgtgagaagaacaaggactat
gagactcacctgaataatgtcctggaactgagtaaccaatcagctgttgagaagatgagc
cttgaggatgagattaagaggtgcagagacctgtgtgccaaggcaaccaggaggtctgag
ggagcagagctgtctatattagagaaccggcgtggcgctggcctgcgctgcctctacagg
tctctgtcggaagccagggccatccttgccaaactcaaggaagtggcacccagattacct
acccaaattctgcagtcagccacagatgcctggggagcatgtgttcaagaagcggaggag
aaagtctgtgcaactgagttttgttgtactccacagctgcagtaccaggatcataagaag
caggtgaagaggggggccaggctgtgcactctgcccccagtaactgtacccagccccccc
cggcccccacctgtacctatgctgttcccaccccaggctcaccagcagctccctcgccac
ctgctgcacatgagaggccacccggggatgcccagtgcccctccggcctcagccatggct
cagagtgttgcactgtcccccggcagtgctaatgatcctagcggccatttcacaaggcct
ccccagcagaaccaggctcctgggccacaggccccacagcccaacaatgtgtgcgagaga
atcatggaccgcctcagcgtcatgttccctcactatagcaggctcttgctgtacaagttc
actggggagatgcgcacagccaacggaggctgcctgacctccctgtcctatgaggaggtt
atcaaccgagtggcccagcacatcctggaccaccaggacaacaccagggagcagctgagc
agtgtgggtgaaggtgaccccggggcccagccgtatgggaccccttcacattccgactct
cccgcctcagtctgctctactggaacccctccccctgcccacgtctggaagagagtgggt
gcccacagacactcccagtccaaggcgctgaatatggaggatccctgtatcatctgccat
gaagacatgtccaaggaggacctgtgtgtgttggagtgcagacacagcttccacagagag
tgtattaagtcatggctgaaggagcagagcacctgtcccacctgcagagagcacgctctc
ctgcccgaggacttccctctgctgcttggcagaatctgcaggggtcacacgtctgccttc
tcctaa
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integrated database retrieval system
