Salvelinus fontinalis (brook trout): 129868660
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Entry
129868660 CDS
T11136
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sfon Salvelinus fontinalis (brook trout)
Pathway
sfon04010
MAPK signaling pathway
sfon04020
Calcium signaling pathway
sfon04510
Focal adhesion
sfon04540
Gap junction
sfon04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
129868660
04020 Calcium signaling pathway
129868660
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
129868660
04540 Gap junction
129868660
09142 Cell motility
04810 Regulation of actin cytoskeleton
129868660
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfon01001
]
129868660
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sfon04090
]
129868660
Enzymes [BR:
sfon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
129868660
Protein kinases [BR:
sfon01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
129868660
CD molecules [BR:
sfon04090
]
Proteins
129868660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
Motif
Other DBs
NCBI-GeneID:
129868660
NCBI-ProteinID:
XP_055798809
LinkDB
All DBs
Position
13:40221823..40245843
Genome browser
AA seq
1106 aa
AA seq
DB search
MWRGTLPRVLSIHTGTMELGLAKSLPLVAIFAVLLQFCPEGFSLELSPSEKEVTLSTNSS
FTVVCSGWSKVTWKSPHDPSLEGVAVEDRGTTSVLVLHNVTWRHSGNYICEEPSTEEAKD
ISVFVPDPEEWFLPLRQAVVMKEGEEGTIPCVVTDPGIDVTLYERDSKAPVEGTYHPSKG
FTAILKDSSYICRGAMNGEEKASQVYYVYSIVVPKSMNAFMTLSKTVLKQGEALMVNCTV
EEAEMVYFEWDFPRKETIEPLTDFLSEIRIRSFLNISSVTLEDSGQYICRVQDSFAGKSA
MDNLTVTVLERGFVDLEPSIDANVSALQYQSVELTVQIEAYPKPQVLWTRDNTTLTGETV
SMDTRQVHETSYLSTLTLVRVRMEQRGLYTVRVANEDDVKEITFDLQVTSSPKIIDLSDQ
HMDQGHGVLCVTEGVPTPTIHWYSCESIGKCSNKTTAWKSLSADQENVSIQMNVSYIEAS
GVNHVRSLLTFQTMGGITSVRCEARNERGRRAWDIKLVSNSLFSQVAVLAAVLALVVIAV
IFLVILIALWRKKPRYEIRWKVIESVSSDGHKYTYMDPMHLPYDCVWEVPRDSLVLGHTL
GSGAFGRVVEATAYGLGHAQSTTKVAVKMLKSTARTSETQALISELKIMSHLGPHLNIVN
LLGACTKRGPIYLITEYCCYGDLVDYLHRNKHNFLQYYADKNRRDADMCRNSTESPVQIQ
GKSESDGGYMDMTKEDSLNYVPMQELSDKIKYTDIEPSVNETPYHQDNNYQGQGQERADV
ALSISDSPILSYTDLVGFSYQVANGMDFLASKNCVHRDLAARNVLICEGKLVKICDFGLA
RDVMNDSNYIAKGNTFLPLKWMAPESIFQNLYTTLSDVWSFGILLSEIFTLGGTPYPDIP
MNEQFYTALKRGYRMPKPAHATDEIYDVMCKCWDEQFKKRPLFSSLVNLMGNLLTDAYKK
KYTQVNESFLKGDHHAAIRSKPIPAGNPAVSSGDHSSGDRAGQETGEIEETGKEAGPSQT
DYIIAIPDIHVAEEAEAGGEVLDTATQSTSSPPSTTDQTDTDTASLDGPEASLEEPVPTE
EEVPPPTQEDKLPQSPCTPEVEESFL
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaggaactctcccaagagtgttatcaattcacactggcactatggagttgggc
ttggcaaagtctctgcctttggtggccatctttgcagtgctgctgcagttttgtccagag
ggcttcagtctggagctcagccccagtgagaaggaggtcacactgagcaccaactcctcc
ttcacggtggtctgttctggttggagcaaggtgacctggaagtctccccacgaccccagc
ctggagggagtggctgtggaggacaggggaacaaccagtgtgctggtcctccacaacgtc
acctggaggcactctgggaactatatctgtgaagagccctctacagaggaggccaaggac
atatcggtgtttgtaccagacccggaggaatggtttcttcccctgcgccaagcagtagtg
atgaaggagggagaggaaggtaccattccctgcgtggtgactgaccctggcattgacgtg
accctgtacgagagggacagcaaggcccccgtggagggaacataccaccccagtaaaggg
ttcaccgccatcctgaaagatagctcctacatctgccgaggtgccatgaacggagaggag
aaggcgtcccaggtgtattatgtctacagcattgtggtccccaaatctatgaacgccttc
atgacactctcaaagactgtgctgaaacaaggcgaggctttaatggtcaattgtactgta
gaagaagcagagatggtttacttcgaatgggattttcctcgcaaagagacaattgagcca
ctgacagactttctatcggagattagaatccgctccttcttgaacatctccagtgttact
ctggaggactctggccagtacatctgtcgagtgcaggactctttcgccggaaagtcagcc
atggataatctcactgtcactgttctggaacggggctttgtggatctggaaccctccatc
gacgccaatgtttcagcgctccagtatcagagtgttgagctcacagtgcagattgaagcg
tatcccaaacctcaggtgctctggaccagagacaacaccacccttactggggaaactgta
tccatggacaccagacaggtgcacgagaccagttacctcagtactctgaccttggtaagg
gtcaggatggaacagaggggcctctacactgtccgggtggccaatgaagatgacgtcaag
gagataacctttgatcttcaagtcacgtcttccccgaagataatagatttgtctgaccag
catatggaccagggccacggtgtgctctgtgtcacagagggggtccccacacccaccatt
cactggtacagctgtgaaagcattggaaaatgcagtaataagaccacagcatggaagtct
ctgtcggctgaccaggagaacgtcagcatccagatgaacgtgagctacatcgaggcctca
ggggtcaaccacgtccgcagccttttgaccttccagaccatggggggtatcacatcagta
cgctgtgaagcccgcaatgagagagggcgcagggcctgggacatcaaactggtctcgaac
tctcttttctcccaggtggctgtcttggctgcagtgttagccctggtggtcattgccgtc
atcttcctcgtcatcctcatcgccctttggagaaagaagccccggtatgagatccgttgg
aaggtgatcgagtcagtcagctcagatggccataagtacacctacatggaccccatgcac
ctgccatatgactgtgtatgggaggtgccccgggacagcctggtcctgggtcacactctg
ggttctggagcatttgggagggtcgtggaggccacagcctatggccttggtcacgctcag
tccaccaccaaagtggctgtgaagatgctcaagtccacagcaaggacaagtgagactcag
gctctgatatctgagctgaagataatgagtcaccttgggccccatctaaacatcgtcaac
ctactgggggcttgtacgaaacgaggtcctatctacctcataactgagtactgttgctat
ggtgacctggttgactaccttcaccgcaacaagcacaacttcctgcagtactacgcagac
aaaaaccgcagggatgctgatatgtgcaggaacagcacagagagtccagtccaaatccaa
ggaaaaagtgagagtgatgggggttacatggacatgaccaaggaagattctttaaattat
gtcccaatgcaagagctgagtgacaagatcaagtatacagacatcgagccttcagtcaat
gagacaccctaccaccaggacaacaactaccaaggacaaggccaagagagagcagacgtc
gcgttgtctatcagtgactccccaattctgagctacacagatctggtgggctttagctac
caagtggctaacggcatggactttctggcatccaagaattgtgttcatcgtgacctggct
gccagaaacgttctcatctgcgagggaaagctggtgaagatctgtgactttggcctggcc
cgtgacgtcatgaacgactccaactacatagccaaaggcaacacattcctgccactgaag
tggatggctccagagagtatcttccagaacctctacacaaccttgagcgatgtttggtct
tttggcattctgctttcagagatctttactctaggaggaacgccctatcctgacattccc
atgaatgaacagttctacactgccttgaagagaggctacaggatgcctaagcccgctcat
gctacagacgagatctatgacgtcatgtgcaagtgttgggatgagcaattcaagaagagg
ccactgttctcctctctggttaatttgatgggaaacctgctgactgatgcttacaaaaag
aaatacacccaggtgaatgagagctttctgaagggcgaccaccacgctgcaatcaggtcc
aaacccataccagcagggaacccagctgtgtcttcaggtgaccactcctcaggggatcga
gcgggtcaggagacaggggagatagaggagactgggaaggaggctggcccctcccagact
gactacataatcgccatcccagatatccatgtagccgaagaggcagaagcaggtggtgag
gtgctggacaccgccacacagagtacatcaagtcctccaagcacaaccgaccagactgat
acggatacagcctccctggatggaccagaagcatccctagaagaaccagtacccacagag
gaagaggtgcctccccccacgcaagaagacaagctcccccagtctccatgtacccctgaa
gtggaggagagtttcctgtag
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