Salvelinus fontinalis (brook trout): 129869097
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Entry
129869097 CDS
T11136
Name
(RefSeq) short transient receptor potential channel 5-like isoform X1
KO
K04968
transient receptor potential cation channel subfamily C member 5
Organism
sfon Salvelinus fontinalis (brook trout)
Brite
KEGG Orthology (KO) [BR:
sfon00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sfon01009
]
129869097
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sfon04040
]
129869097
Protein phosphatases and associated proteins [BR:
sfon01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
129869097
Ion channels [BR:
sfon04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
129869097
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_5
Ank_3
PKD_channel
LHD_TRPY1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
129869097
NCBI-ProteinID:
XP_055799574
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All DBs
Position
13:55228653..55259557
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AA seq
1042 aa
AA seq
DB search
MMNPMAQLYYKKASYSPYRDRIPLQIVRAEAELSAEERAYLTAVEKGDYAGVKLALQEAE
IYYNINVNCLDPLGRSALLIAIENENLEVMELLLNHGVHVGDALLYAIRKEVVGAVELLL
SHRRSSREKQVPNLMMDTQFSEFTPDITPIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRC
DCVACVSSSEVDSLRHSRSRLNVYKTLASPSLIALSSEDPILTAFRLGWELKELSKVENE
FRQEYEELSQQCKLFAKDLLDQARSSRELETILNHRDDLSEELDPQDCRDLAKLKLAIKY
HQKEFVSQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFTIGLLFPIFSLVYLLAPKSAL
GLFIKKPFIKFICHTASYLTFLFLLLLASQHIVRTDLHVQGPPPTVVEWMILPWVLGFIW
AEIKEMWDGGFTEYVHDWWNLMDFAMNSLYLATISLKIVAYFKYNSSRPREEWEMWHPTL
IAEGLFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLN
QLYFYYETKASDEPNNCKGIRCEKQNNAFSTLFETLQSLFWSIFGLLNLYVTNVKARHEF
TEFVGATMFGTYNVISLVVLLNMLIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGT
LPPPFNIVPSPKSVWYLCVWTHNRLCGRDRPSPDDPRKHENLKEFTERHADNLIQNQHYQ
EVIRNLVKRYVAAMIRSAKTDEGLTEENFKELKQDISSFRYEVLDLLGDRKPPRRTYSSS
SEATQQDEANEEEGAGQAQGQSRDQGAKGVSFSTSIAERKSKDSGFSVSALFKSMSGADG
AVDNKPKSNGLRFSSSPPSSAALTRSSGRLQRFSKSKRDSIRRLGLLFSRMNGHVPEPRS
PPPRMHQPTYSISDGLLRQPTTWPDIQTHPNPPVTRSLFHLDQLGVNLNELPHAPPQALP
LGSPQQANGSDSLLLRPAGHSLPPPGHSVPPLHCASSITASSSRAVLLGSSEDMFEGWIG
PCDELDSSEWGAEQDDSITTQL
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcccatggcccagctgtactacaagaaggcgagctactcgccgtaccgcgac
cgcatcccgctgcagatcgtgcgggcggaggcggagctgtcagcggaggagcgggcgtac
ctgacggcggtggagaagggcgactatgccggggtgaagctggccctgcaggaggcggag
atctactacaacatcaacgtgaactgcctggacccgctggggcgcagcgcgctgctcatc
gccatcgagaacgagaacctggaggtgatggagctgctgctcaaccacggcgtgcacgtg
ggcgacgcactactctacgccatccgcaaggaggtggtgggcgccgtggagctgctgctg
tcccatcgcaggtccagcagagagaaacaggtgcccaacctgatgatggatactcagttc
tcagagtttacccctgacatcacacccatcatgctggcagctcacaccaacaactatgag
atcatcaagctgctggtccagcgcaaggtgaccatcccccggccacaccagatccgctgc
gactgcgtggcctgtgtgtccagctccgaggtggacagcctgcgtcactcacgctcccgc
ctcaacgtctacaagaccctggccagcccgtccctcatcgccctgtccagcgaagacccc
atcctgactgccttccgcctgggctgggagctgaaggagctaagcaaggtggagaatgag
ttccgtcaggagtacgaggagctgtcccagcagtgtaagctgtttgccaaggacctgctg
gaccaggccaggagctctagagagctggagaccatcctcaaccaccgcgatgacctcagt
gaggagctagacccacaggactgccgtgacctggccaagctcaaactagctatcaagtac
caccagaaagagtttgtgtcccagccaaactgtcagcagctcctggccaccctgtggtac
gacggtttccccgggtggcgcagacgccactgggcggtcaagctggtcacctgcttcacc
atcggcctgctcttccccatcttctccctggtctacctgctggcccccaagagcgccctg
ggcctcttcatcaagaagcccttcatcaagttcatctgccacacagcctcctacctgact
tttcttttcctcctcctcctggcctcccagcacatcgtgagaacagacctgcatgtccag
ggcccgccgcccaccgtggtggagtggatgatccttccctgggtgctgggcttcatctgg
gctgagataaaggagatgtgggacggaggcttcactgagtacgtccatgactggtggaac
ctgatggactttgccatgaactctctctacttggccactatctcactcaaaatagttgct
tacttcaagtacaacagctctcggccgcgggaggagtgggagatgtggcacccgacgctg
atcgccgagggcctgtttgctatcgccaacatcttcagctccctgcgcctcatctccttg
ttcacagccaactcccacctggggcctctgcagatctccctgggacgcatgctgctggac
atcctcaagttcctcttcatctactgcctggtgctgctggccttcgccaacgggctcaac
cagctgtacttctactacgagaccaaggcctcggacgagcccaacaactgcaagggcatc
cgctgcgagaagcagaacaacgccttctctacgctgtttgagacgttgcagtccctgttc
tggtcgatattcggcctgctcaacctgtacgtgaccaacgtgaaggcacgccatgagttc
acagagtttgtgggagccaccatgttcggtacctacaacgttatctccctggtggtgctg
ctcaacatgctcatcgccatgatgaacaactcctatcagctcatcgctgaccatgcggac
attgaatggaagtttgcccgcaccaagctgtggatgagctattttgacgagggaggaact
ctcccgccgcccttcaacatcgtccccagccccaagtcagtgtggtacctgtgtgtgtgg
acgcacaaccgcctgtgtggacgggaccgtcccagtcccgacgacccgaggaaacacgag
aacttaaaggagttcacggagcggcatgctgacaacctgattcagaaccagcattatcag
gaggtgatcaggaacctggtgaagaggtatgtagcagccatgatccgcagtgctaaaaca
gacgagggtctgacagaggagaattttaaggagctcaagcaggacatctccagtttccgc
tacgaggtgttggacctgttgggggacaggaaacctccgcggaggacctactcatccagc
agtgaggctacccagcaggacgaggccaacgaggaagaaggggctggacaggcccagggt
cagtccagggaccaaggggccaagggggtatccttcagcacgtcaatcgctgagaggaag
agcaaggactctgggttcagcgtctccgccctctttaagtccatgtcaggggcagacggg
gcagtggacaacaaaccaaagagcaacgggctcagattctcctcctcccccccgtcctct
gctgcgttaacccgcagtagtggccggctgcaacgcttctccaagtccaagagagactcc
atcaggcggctgggcctgctcttctcccgcatgaacggacacgtgccagagcccaggtcc
cctcctcccaggatgcaccagcccacctacagcatctcagacggtctgcttcggcagccc
acaacctggccggacatccagacccaccccaatcccccggttacacgcagcctgttccac
ctggaccagctgggggtgaacctgaacgagttaccacatgcccctccccaggccctgcca
ttggggtcaccccagcaggctaacggaagtgacagtctgctcctgcgaccggcgggccac
tccttaccgccgccaggccactccgtgccacccctgcactgtgcttccagcatcacggcc
tccagctctcgggctgtcctcctgggctctagtgaggacatgtttgagggctggatagga
ccttgtgacgagctggactcctctgagtggggggctgagcaggacgattccatcacaaca
cagctttag
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