KEGG   Shewanella frigidimarina: Sfri_0872
Entry
Sfri_0872         CDS       T00395                                 
Name
(GenBank) methionine synthase (B12-dependent)
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
sfr  Shewanella frigidimarina
Pathway
sfr00270  Cysteine and methionine metabolism
sfr00450  Selenocompound metabolism
sfr00670  One carbon pool by folate
sfr01100  Metabolic pathways
sfr01110  Biosynthesis of secondary metabolites
sfr01230  Biosynthesis of amino acids
sfr04981  Folate transport and metabolism
Module
sfr_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:sfr00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Sfri_0872
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Sfri_0872
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Sfri_0872
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    Sfri_0872
   04980 Cobalamin transport and metabolism
    Sfri_0872
Enzymes [BR:sfr01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Sfri_0872
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding
Other DBs
NCBI-ProteinID: ABI70725
UniProt: Q086U0
LinkDB
Position
complement(1024225..1027941)
AA seq 1238 aa
MAKSTSYSQTLKQLNALLAQRIVILDGAMGTMIQDYKLEEEDYRGERFKDWHCDVKGNND
LLVLSQPQIIKDIHTQYLLNGADIIETNTFNATTIAMADYDMQSLAAEINLAGARVARQA
ADEVAAQTGSPRYVAGVLGPTNRTCSISPDVNDPGFRNVSFDQLVEAYVESTSALIEGGA
DIIMVETIFDTLNAKAALFAIEKVFDQLGDRLPVMISGTITDASGRTLTGQTTEAFYNSL
RHIKPLSIGLNCALGPKELRPYVEELSRIAECYVSAHPNAGLPNEFGGYDETPEEMAEVI
NQWAQEGMLNIVGGCCGSTPAHINAIREAVLRHEPRQIPDLPVACRLSGLEPLTIDKNSL
FVNVGERANVTGSAKFLRLIKEEKFEEALDVVREQVENGAQIIDVNMDEGMLDGVASMAK
FLNLIASEPDISRVPIMIDSSKWEVIEAGLKCVQGKSIVNSISMKEGEAKFIEQATLVKR
YGAAAIVMAFDEDGQADTRERKTQICTRAYRILVDVVGFPPEDIIFDPNIFAIATGIDEH
DNYAVDFIESIKDIKATLPHAMISGGVSNVSFSFRGNNPVREAIHAVFLYHAIQAGMDMG
IVNAGQLAIYDDIDPELKKRVENVVQNLPCPVADSSNTEQLLDIAESFRGDGSQVAKKED
LAWRSWPVSKRLSHALVKGITEFIDEDTEAARLEAVRPLDVIEGSLMDGMNVVGDLFGAG
KMFLPQVVKSARVMKKAVAYLNPYIELEKVAGQSNGRILMVTVKGDVHDIGKNIVGVVLA
CNGYEVVDLGVMVSVDKILDAVKEHNIDIIGMSGLITPSLDEMVHNVKTFHREGLTIPAI
IGGATCSKIHTAVKIAPHYPHGAIYIADASRAVPMVSKLINNATRQATIDEAYAEYNMMR
EKRLSQTKRKTIVSIEAARENRCKHDWDSYTPFTPNVLGRQVFEDYPLEDLVERIDWTPF
FRSWELHGHYPEILKDKVVGEEAVKLFADGQAMLKQIIAEKWLTAKAVIGLFPANTVNHD
DIELYTDESRTTLEMTTHHLRMQLERVGNDNFCLSDFVAPKDSGVADYMGGFAVTTGHGI
DEHVARFEANHDDYNAIMLKCLADRLAEAFAERMHERVRKEFWGYAADEVLDNEALIRER
YKGIRPAPGYPACPDHTEKGLLWDLLKPDETIDLNITESFAMYPTAAVSGWYFAHPKSRY
FGVTNIGKDQVEDYAQRKGMTLAEAEKWLSPILDYDPE
NT seq 3717 nt   +upstreamnt  +downstreamnt
atggcgaaatcgacttcttacagtcaaacacttaaacaacttaatgcattgttagcgcag
cgtattgtgattctagatggcgccatgggcaccatgatccaagactataagttggaagaa
gaagattatcgtggtgagcgttttaaagattggcattgcgatgttaaaggcaacaatgac
ttattagtactcagccaaccgcaaatcattaaagatattcatactcagtacctgttaaac
ggtgccgacattattgaaaccaacacctttaatgccaccaccattgccatggccgactac
gatatgcagtcactggccgctgaaattaaccttgctggcgcccgagtcgcccgccaagca
gcagatgaagtagcagcacaaaccggttcaccacgttatgttgccggtgtattaggtcca
accaaccgtacctgttctatcagcccagacgttaacgaccctgggtttcgtaatgtcagt
ttcgaccaattagtcgaagcttatgtcgaatcaaccagcgccttaattgaaggcggcgcc
gatatcattatggttgaaaccatttttgataccttaaacgccaaagccgccctgttcgcg
attgaaaaagtattcgatcagcttggcgatcgcttacccgttatgatctcgggcactatt
accgacgcctcaggccgcacactaaccggccaaacaaccgaagccttttataactcttta
cgccacatcaagccgttatcgattggccttaactgcgcccttgggcctaaagagttacgc
ccgtacgttgaagaattgtcacgtattgccgaatgttatgtttccgcccacccaaatgct
ggcttacccaacgaatttggcggctatgatgaaaccccagaagaaatggccgaagtcatt
aatcaatgggcgcaagaaggcatgctcaatattgtcggtggttgttgtggcagcacaccg
gctcacattaatgccattcgtgaagcagtactcagacatgaaccaagacagatcccagat
cttccagtcgcgtgtcgtttatctggcctagaaccacttaccatcgataaaaactcgtta
tttgtgaacgtcggcgagcgcgctaacgtgaccggttcggctaaatttttacgcttaatt
aaagaagaaaagttcgaagaagcgttagatgtcgtgcgcgagcaagttgaaaatggcgcg
caaattatcgacgtcaacatggacgaaggtatgctcgatggcgtagcgtctatggcgaag
tttttaaacttaatcgcctctgagcccgacatctcgcgtgtgccaatcatgattgactca
tcaaaatgggaagtgatagaagcgggccttaaatgtgttcaaggcaagtcgattgttaac
tctatttcgatgaaagaaggcgaagccaagtttattgagcaagctaccttagtgaagcgc
tatggcgctgccgccattgtcatggcctttgacgaagacggccaagccgatactcgtgag
cgtaaaacccaaatttgtacccgtgcttatcgcattttggtcgatgtggttggctttcca
ccagaagacattatttttgatcccaatatcttcgccattgccaccggtatcgatgaacac
gacaactatgccgtcgactttatcgaatcgataaaagacatcaaagccaccttgccacac
gcgatgatctccggtggcgtgtctaacgtgtcattctcgttccgtggtaacaacccagta
cgcgaagccattcacgcggtatttttataccatgccattcaagcaggcatggacatgggt
attgttaacgcaggtcagttagccatatacgatgatattgacccagagctgaaaaaacgg
gttgaaaacgtagtccaaaacttaccttgcccggttgccgactcaagtaacaccgaacaa
ctactcgacatcgctgaaagctttagaggcgacggctcacaagtggccaaaaaagaagat
ttagcttggcgtagttggccggtatccaaacgtttgtcgcacgcattggttaaaggcatt
accgaatttattgatgaagacaccgaagccgctcgcctagaagccgtgcgcccgctcgat
gttatcgaaggctcgttaatggacggcatgaacgtggtcggcgacttatttggcgcgggc
aaaatgtttttaccgcaagtggttaaatcggctcgggtaatgaaaaaagccgtcgcttac
cttaatccttatatcgaactcgaaaaagtggcaggccagtcaaacgggcgaattttaatg
gtcaccgtaaaaggtgatgtgcatgacatcggtaaaaatatcgtcggtgtggtactggcc
tgtaacggctacgaagtggtcgaccttggagtgatggtatcggtcgataaaattctcgat
gcagtaaaagagcataatatcgacatcatcggcatgtcaggtttaatcaccccaagtttg
gatgaaatggttcacaacgtgaaaaccttccatcgtgaaggcttaaccatccctgcaatt
attggtggtgcaacctgctctaaaattcatactgcagtaaaaatagccccgcattatcca
cacggtgccatttacattgccgatgcatctcgcgccgtgcctatggtgtcgaaactgatt
aataacgccactcgtcaagccaccatcgacgaagcctacgcagaatacaacatgatgcgt
gagaaacgtttgtcgcaaaccaagcgtaaaaccatcgtgtcgattgaagcggcgcgcgaa
aaccgttgcaaacacgactgggacagctacaccccattcacgcctaatgtattaggccgc
caagtgtttgaagactacccactagaagacttagttgaacgtatcgattggacaccgttc
tttagaagctgggagttgcacggccattacccagaaattttaaaagacaaagtcgtcggc
gaagaagcggttaaattgtttgctgatggccaagccatgctgaagcaaattattgctgaa
aaatggcttaccgccaaagcagtaatcggtttattcccagccaataccgtcaaccatgac
gacattgaactgtataccgatgaaagccgcaccacattggaaatgaccactcatcatcta
cgtatgcagcttgaacgcgtgggtaacgacaacttctgtttatcagactttgttgcccca
aaagattcaggcgttgctgattacatgggcggttttgcggtaacgacggggcacggtatt
gatgaacatgttgcccgctttgaagccaatcacgatgactacaacgcgattatgctcaaa
tgcttagcagaccgtttagccgaagcttttgccgagcgcatgcacgaacgtgttcgtaaa
gagttttggggttatgctgcggatgaagtactcgacaatgaagcgttaattcgcgaacgt
tataaaggcattcgcccagcaccaggttacccagcatgccccgaccacactgaaaaaggc
ttgttatgggatttactcaaacccgatgaaactatcgatttgaacatcaccgagagcttt
gccatgtacccaacggcagcggtatctggctggtactttgcccatccgaaatcacgctat
tttggcgtgactaatattggtaaagatcaggttgaagattatgcccagcgcaaaggcatg
acgttggcagaagcagagaaatggttgtcaccgatattggactatgatcccgaatag

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