Shewanella frigidimarina: Sfri_1866
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Entry
Sfri_1866 CDS
T00395
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sfr
Shewanella frigidimarina
Pathway
sfr01501
beta-Lactam resistance
sfr01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sfri_1866
01503 Cationic antimicrobial peptide (CAMP) resistance
Sfri_1866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sfr03036
]
Sfri_1866
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sfr02000
]
Sfri_1866
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_1866
Chromosome and associated proteins [BR:
sfr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Sfri_1866
Transporters [BR:
sfr02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Sfri_1866
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Sfri_1866
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
HlyD_2
Biotin_lipoyl_2
CSD2
Motif
Other DBs
NCBI-ProteinID:
ABI71714
UniProt:
Q082V1
LinkDB
All DBs
Position
2206663..2207820
Genome browser
AA seq
385 aa
AA seq
DB search
MRSTITLDKKIIDIIHSTFDGYGLEMKKIIVLIAIVLAALSAYYLLAPKEAIVQRPRPIP
NVVVAKVAIMPIRDEVEALGTGKAYESIIVTSKVTEIVTSINFNDGDLVKKGSLLVQLRN
DEHKAKVAVTEIKLVENLRELDRIRSLVTSKTIAELERDRLQSLIDTTRAEVAQAKAALE
DRAIKAPFPGKLGLRQVSVGSLVTPGEQISTLDDVSKIKLDFSVPERFIQELQPGKLVEA
KAVAYPDRIFKGVVTSIDSRVNPDTRAVVVRAVMPNDDYKLLPGMLMKVRLIKQSREALL
LPEAAIIPIQNKHYVYVVNAENVVEQQQVTLGSRTRGWVEITDGLKVDQQVIIRGILKVR
PGDKVQVEQAENFKFAQVEGMEKSA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaagtacaattactttagataaaaaaatcatagatataattcattcaacctttgat
ggttacggactcgaaatgaaaaagataatcgtactgattgccatagtgctagcggcactg
tcggcttactatttactggctcctaaagaagcgatagttcaacgtcctaggccaatacct
aatgtggtggttgccaaggtggctattatgcctattcgtgatgaagtcgaagcattaggt
acgggtaaagcctatgagtctattatcgttacctctaaagttactgaaattgtcaccagt
attaatttcaatgatggcgatttagttaaaaaaggctcgttattagtacaactcagaaat
gacgaacataaagccaaagtagccgttaccgaaattaagttagttgaaaacctccgcgaa
ttagatcgtatccgatcattggttaccagcaaaacgattgcagaattagaacgcgaccgt
ttacaaagtttaattgataccactcgtgcagaagtggctcaggctaaagctgcactcgaa
gaccgcgcaattaaagccccatttccaggtaaattaggtttgcgccaagtgagtgtgggc
agcttagtgaccccaggtgagcaaattagtaccttagatgatgtgagtaaaattaaatta
gatttctcagtgccagagcgttttatccaagaattacaacccggcaaactcgttgaagct
aaagctgttgcttatccagaccggatatttaaaggtgtcgttacttcgattgatagccgc
gtgaacccagatactcgagcggtagttgtgcgcgcggtaatgcctaatgatgattataag
ctactgcctggcatgttgatgaaagtgcgtcttattaagcaaagtcgcgaagcattacta
ttacccgaagctgcaattattcctattcaaaacaagcattatgtttatgtagtaaatgct
gaaaatgttgtcgaacagcaacaagttactttaggcagtcggacacgtggttgggttgaa
ataaccgatgggcttaaggttgaccaacaagtgattattcgcggaattttaaaagttcga
ccaggagataaagttcaagttgaacaagccgaaaactttaagtttgctcaagtagaaggt
atggagaagtcagcatga
DBGET
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