Shewanella frigidimarina: Sfri_2343
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Entry
Sfri_2343 CDS
T00395
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr00020
Citrate cycle (TCA cycle)
sfr00785
Lipoic acid metabolism
sfr01100
Metabolic pathways
sfr01110
Biosynthesis of secondary metabolites
sfr01120
Microbial metabolism in diverse environments
sfr01200
Carbon metabolism
sfr01210
2-Oxocarboxylic acid metabolism
Module
sfr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sfr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Sfri_2343
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
Sfri_2343
Enzymes [BR:
sfr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
Sfri_2343
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
PmbA_TldD_1st
Motif
Other DBs
NCBI-ProteinID:
ABI72189
UniProt:
Q080X6
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All DBs
Position
complement(2790067..2792889)
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AA seq
940 aa
AA seq
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MHQGIMKAWLESSHLSGSNSTYVEEMYEAYQEDPQSVTPDWQLVFDNLPPVNGASVEVPE
TAHSKVRDYFRSLALQGRLKNATSVGDPELDAKQVKVLQLINAHRFRGHQNANLDPLGLW
KREAVQELDPAYHGLTVDDMQRQFNTGSFALGGETMKLADIIHALKSTYCGSIGAEYMHI
TDTDEKRWIQQRLEPTLGKAKYDNSVKKRILEGLNAAEGIEKYLGAKFPGAKRFSLEGGD
ALVPMMREIIYRAGEAGTKEIVVGMAHRGRLNLLINVLGKRPAELFDEFAGKHADTHGSG
DVKYHQGFSSDFETPGGNVHLALAFNPSHLEIVNPVVIGSVRARQDRRGCKDGLQVMPIT
IHGDSAITGQGIVQETFNMSQTRGFTIGGSIRIVVNNQVGFTTSNQADTRSTEYCTDIAK
MVQAPIFHVNSDDPEAVAFISQLAVDYRNEFKRDVVIDLVCYRRHGHNEADEPSATQPLM
YAKIKKHPTPRKIYADKLIAENSIPADEVTGLINHYRDALDAGDCVVKEWRPMTLHTVDW
TPYLNREWDEEYAGSMSMERLQNLANKLVDIPENHTLQSRVAKICADRTAMAKGEKLLDW
GFAETLAYASILEDKKRVRITGQDSGRGTFFHRHAVLHSQKDGSTYLPLRNVADEQGPID
IIDSVLSEASVLAFEYGYATAEPGGLTIWEAQFGDFVNCAQVVIDQFLSSGEQKWGRLCG
LTMLLPHGYEGQGPEHSSGRLERFLQLCANHNMQVCVPSTPAQVYHMLRRQVVRPMRRPL
VVMSPKSLLRHPLAVSTLEELAEGTFQNIIGEIDTLDASQVDRVVFCSGKVYFELLEKRR
KENVTNVAIVRVEQLYPFPDVEMRAALETYQHVTDFVWCQEEPQNQGAWYCSQHHFWANI
PAGAQLTYAGREASAAPACGYPGLHVQQQESLVNSALKLS
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaggcatcatgaaagcctggctcgagtcgtcacatttaagtggttcgaactcg
acctacgtagaagagatgtatgaagcctatcaagaagatccgcaatcagttactcctgat
tggcagcttgtttttgataacctccctccggttaacggtgcctcagtagaagtacccgaa
actgctcactctaaagttcgtgactatttccgtagtttagctttacaaggtcgtttaaaa
aacgctactagcgtcggcgacccagagttagatgcgaagcaagttaaagtcctgcaactg
atcaatgctcaccgtttccgtggccatcaaaatgccaatttagatccattaggattgtgg
aagcgtgaagctgttcaggaattggatcctgcttaccacggcttaaccgttgatgacatg
caacgtcagtttaatactggttcattcgccctcggcggtgagaccatgaagcttgctgat
attattcatgcactaaagagtacctattgtggctcgataggtgctgaatacatgcatatt
actgataccgatgaaaagcgttggatccaacaacgtcttgaaccgacattaggtaaagcc
aagtacgataacagcgtcaaaaagcgtattcttgaagggttgaatgcagccgaaggtatc
gaaaaatatcttggtgctaaattccctggagctaaacgattctctttagaaggtggtgat
gcgctcgttccgatgatgcgtgaaatcatttaccgtgcaggcgaagctggaactaaagaa
atcgtagtaggtatggctcaccgtggtcgtttaaacttgctcataaacgtgctgggtaaa
cgtcctgctgaattgtttgatgagtttgcgggtaagcatgcggacactcacggttctggc
gacgtaaaatatcaccaaggtttctcatctgattttgaaacgccaggtggaaacgttcat
ttagcattagcctttaacccatctcatttagagatcgttaatccagtggttattggttct
gtacgtgctcgtcaagatcgtcgtggttgtaaagacggtctgcaagttatgcctatcacc
attcatggtgattcagctataactggccaaggcattgtgcaagagacgttcaacatgtct
caaacacgtggttttactattggtggtagtattcgaattgtggttaataaccaagttggt
tttaccacatcaaaccaagctgacacacgttcaaccgaatactgtactgacatcgctaag
atggttcaggcacctattttccatgtcaattctgacgatcctgaagccgttgcgtttatt
tctcaacttgcagtggattatcgtaatgaatttaaacgtgatgtagtgattgatttagtg
tgttatcgccgtcatggccataacgaagctgatgagcctagtgcgactcagccgttaatg
tacgctaaaatcaaaaaacaccctacgccacgtaaaatttatgctgataagttgatagct
gaaaacagcattcctgccgatgaagtgaccggactgattaaccattatcgtgatgcatta
gatgcaggtgattgtgtggttaaagaatggcgtcctatgacgttacatacagttgactgg
acaccttatttaaatcgcgaatgggatgaagaatacgccggttcaatgtcgatggaacgt
ctgcaaaacttagccaataagttagttgatattcctgaaaatcatacgcttcaatctcgt
gttgccaaaatttgtgctgatcgcactgccatggctaaaggcgagaagttattagactgg
ggtttcgctgaaacgttagcttatgcttctattcttgaagataaaaagcgtgtgcgcatt
acgggtcaagactctggtcgcggcacgttcttccatcgtcatgctgtattgcatagccaa
aaagacggttctacctatttacctttgcgtaatgtggctgatgaacaagggccaattgat
attattgactcagtattatcagaagcatcagtgttggcatttgaatacggttacgcgact
gcagaacctggtggcttgaccatttgggaagcgcagtttggtgacttcgttaactgtgca
caggtagtgattgaccaattcttatcatctggtgagcaaaagtggggccgtttatgtggt
ctgactatgttgttacctcatggttatgaaggtcaaggacctgagcattcaagtggccgt
ttagagcgtttcttgcaattatgtgctaaccacaacatgcaagtgtgtgtgccatcaact
ccggcgcaggtttatcatatgttgcgtcgccaagttgtgcgtcctatgcgtcgcccgtta
gtggtaatgtcacctaaatctttgctacgtcacccattagcggtgtctaccttagaagaa
cttgctgaaggtactttccaaaatatcattggtgagatagataccttagatgcaagtcaa
gttgaccgtgttgtattctgtagcggtaaggtgtatttcgagttacttgaaaagcgtcgt
aaagagaatgtgaccaacgttgccatcgtgcgtgttgagcagctgtatccgttccctgat
gtggaaatgcgtgcagcgttagaaacatatcaacatgttactgattttgtttggtgtcaa
gaagagccgcaaaaccaaggggcatggtactgtagtcagcatcatttctgggctaatatt
cctgcaggtgctcaattaacttatgccggtcgtgaagcttctgctgcaccagcatgtggt
taccctgggttgcatgtacagcagcaagaatcattagtaaatagcgcattaaaactgtcg
taa
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