Shewanella frigidimarina: Sfri_2487
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Entry
Sfri_2487 CDS
T00395
Name
(GenBank) periplasmic sensor signal transduction histidine kinase
KO
K07637
two-component system, OmpR family, sensor histidine kinase PhoQ [EC:
2.7.13.3
]
Organism
sfr
Shewanella frigidimarina
Pathway
sfr01503
Cationic antimicrobial peptide (CAMP) resistance
sfr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sfr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Sfri_2487
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Sfri_2487
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sfr01001
]
Sfri_2487
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sfr02022
]
Sfri_2487
01504 Antimicrobial resistance genes [BR:
sfr01504
]
Sfri_2487
Enzymes [BR:
sfr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
Sfri_2487
Protein kinases [BR:
sfr01001
]
Histidine kinases
OmpR family
Sfri_2487
Two-component system [BR:
sfr02022
]
OmpR family
PhoQ-PhoP (magnesium transport)
Sfri_2487
Antimicrobial resistance genes [BR:
sfr01504
]
Gene sets
CAMP resistance modules
Cationic antimicrobial peptide (CAMP) resistance, protease PgtE [MD:
M00744
]
Sfri_2487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HATPase_c_5
HATPase_c_2
ANIS5_cation-bd
HAMP
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ABI72332
UniProt:
Q080I3
LinkDB
All DBs
Position
2972455..2973807
Genome browser
AA seq
450 aa
AA seq
DB search
MRLILQPKKRLLTRMFLTSLSIIALVGFGLAWLITLLHAQNRYNQTTSALIAQLPIIAAE
FRENNLIPITQAREGDDVDTQYIMATCNSSYNTLWRSDYAISLNLNNICEQYLDIKDDLP
PFYLNFNGQQSYFAYLLSIDVETEMYHLLILKDATALKAELNQFNRLTYFRLAMVMAIAL
LLLVSAAYWGMRPLTQLKQELLQLQQGRKKSLSQDYPVELQGITTALNQLMDQTDQRQTR
YQNAMNDLAHSLKTRLAASIAIIDDDSLDRQQQHQKILEQINDMDHLVQYQLKRAMLGQQ
GLRQQQTVIAPIAQQLAQMLDKIYRDKHVIFTLNISPSLQLPLSKGDVMELLGNLLENAF
RLCGNNVMISAASLDNNLIQLSVEDDGPGVDNAIKQNIIQRGTRADTQSSGQGIGLAVCH
ELVSSYGGTMTIGTSELGGAAFVIQLPATA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgcgactaattttacaacctaaaaaacgcctgcttacaaggatgttcttaacgtccttg
agtattatcgcgttagtgggatttggtctggcgtggttaattaccctacttcatgcccaa
aaccgctataaccaaaccaccagcgctttaatcgcccaattacccatcattgccgcagag
tttcgcgaaaacaatttaatccctatcacccaagcccgtgaaggtgatgacgtcgacacg
caatacattatggctacctgcaatagtagctataacaccttatggcgatctgactacgca
atcagcttaaacttgaataacatctgtgaacaatatcttgatataaaagatgatttaccg
cctttctacctcaactttaatggccaacaaagctactttgcttacttgctcagcattgac
gttgaaaccgaaatgtatcatttattgattttgaaagatgccactgcactgaaagctgaa
ctcaatcaatttaatcgacttacttattttagattggcaatggtaatggctattgcacta
ctgcttttagtgagtgcagcttactggggaatgcggccgttaactcagctaaaacaagag
ttattgcagctacaacaaggacgtaaaaaaagcctatcacaagattaccccgtcgaatta
caaggcatcaccacagcgttaaatcaacttatggaccaaacagaccaacgtcaaactcgc
tatcaaaatgccatgaacgaccttgctcacagcttaaaaacgcgtctcgccgccagtatt
gccatcattgatgatgactcattagatcgtcagcaacagcatcaaaaaatacttgaacaa
ataaacgacatggatcatttagtacaatatcaacttaaacgcgccatgttaggccaacaa
ggtttacgtcagcaacaaactgttatcgcgccgattgcgcaacaacttgcgcaaatgctc
gataaaatctatcgagacaaacatgtcatattcaccctaaacatatcaccttcattgcaa
ctaccactcagcaaaggcgatgttatggagctattgggtaatctgctggaaaatgcattt
cgcttatgtggcaataacgtcatgatcagcgccgctagcctcgataacaatctcatccaa
ctcagtgttgaagatgacggcccgggcgtagacaacgccattaaacaaaatataatccag
cgcggtacgagagccgacactcaatcatctgggcaaggaattggtctagcagtatgccat
gagctcgttagcagttatggcggcacaatgactattggtactagcgagcttggcggagca
gcttttgtcattcagctccccgcaacggcataa
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